RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 HIP1O00291 1037 aa15.35■□□□□ 0.05
UBE3A-226ENST00000637886 JMYQ8N9B5 988 aa15.35■□□□□ 0.05
UBE3A-226ENST00000637886 SPATA24Q86W54 205 aa15.35■□□□□ 0.05
UBE3A-226ENST00000637886 DACH1Q9UI36 760 aa15.35■□□□□ 0.05
UBE3A-226ENST00000637886 VGFO15240 615 aaPredicted RBP15.35■□□□□ 0.05
UBE3A-226ENST00000637886 SMC2O95347 1197 aa15.34■□□□□ 0.05
UBE3A-226ENST00000637886 NACAP1Q9BZK3 213 aa15.34■□□□□ 0.05
UBE3A-226ENST00000637886 LRSAM1Q6UWE0 723 aa15.34■□□□□ 0.05
UBE3A-226ENST00000637886 CFAP57Q96MR6 1250 aa15.34■□□□□ 0.05
UBE3A-226ENST00000637886 AIMP1Q12904 312 aaKnown RBP15.34■□□□□ 0.05
UBE3A-226ENST00000637886 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.34■□□□□ 0.05
UBE3A-226ENST00000637886 TRIM22Q8IYM9 498 aa15.33■□□□□ 0.05
UBE3A-226ENST00000637886 TRAK1Q9UPV9 953 aa15.33■□□□□ 0.04
UBE3A-226ENST00000637886 ELL2O00472 640 aaPredicted RBP15.33■□□□□ 0.04
UBE3A-226ENST00000637886 LETM1O95202 739 aaPredicted RBP15.33■□□□□ 0.04
UBE3A-226ENST00000637886 NOP2P46087 812 aaKnown RBP15.33■□□□□ 0.04
UBE3A-226ENST00000637886 TTC39AQ5SRH9 613 aa15.33■□□□□ 0.04
UBE3A-226ENST00000637886 ZNF396Q96N95 335 aaPredicted RBP15.33■□□□□ 0.04
UBE3A-226ENST00000637886 RSPH4AQ5TD94 716 aa15.32■□□□□ 0.04
UBE3A-226ENST00000637886 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
UBE3A-226ENST00000637886 MIA2Q96PC5 1412 aa15.32■□□□□ 0.04
UBE3A-226ENST00000637886 DDX19BQ9UMR2 479 aa15.32■□□□□ 0.04
UBE3A-226ENST00000637886 NLRP2Q9NX02 1062 aa15.32■□□□□ 0.04
UBE3A-226ENST00000637886 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
UBE3A-226ENST00000637886 CBX1P83916 185 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 PDE3BQ13370 1112 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 GOLGA6L10A0A0M3HER8 536 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 FERMT1Q9BQL6 677 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 TSPYL4Q9UJ04 414 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 CCDC18Q5T9S5 1454 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 PPFIBP1Q86W92 1011 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 PSMD1Q99460 953 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 CCDC158Q5M9N0 1113 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 BCCIPQ9P287 314 aaKnown RBP eCLIP15.31■□□□□ 0.04
UBE3A-226ENST00000637886 TIMELESSQ9UNS1 1208 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 GPRASP1Q5JY77 1395 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 PDCP20941 246 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 NUCB2P80303 420 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 RGS22Q8NE09 1264 aa15.31■□□□□ 0.04
UBE3A-226ENST00000637886 FAM177BA6PVY3 158 aa15.3■□□□□ 0.04
UBE3A-226ENST00000637886 FERP16591 822 aa15.3■□□□□ 0.04
UBE3A-226ENST00000637886 CCDC69A6NI79 296 aa15.3■□□□□ 0.04
UBE3A-226ENST00000637886 LRRC45Q96CN5 670 aa15.3■□□□□ 0.04
UBE3A-226ENST00000637886 API5Q9BZZ5 524 aaKnown RBP15.3■□□□□ 0.04
UBE3A-226ENST00000637886 ZNF287Q9HBT7 754 aa15.3■□□□□ 0.04
UBE3A-226ENST00000637886 RRP7AQ9Y3A4 280 aaKnown RBP15.3■□□□□ 0.04
UBE3A-226ENST00000637886 KIF15Q9NS87 1388 aa15.3■□□□□ 0.04
UBE3A-226ENST00000637886 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
UBE3A-226ENST00000637886 CRBNQ96SW2 442 aa15.29■□□□□ 0.04
UBE3A-226ENST00000637886 CCDC57Q2TAC2 916 aa15.29■□□□□ 0.04
UBE3A-226ENST00000637886 MPHOSPH6Q99547 160 aaKnown RBP15.29■□□□□ 0.04
UBE3A-226ENST00000637886 SETD5Q9C0A6 1442 aa15.29■□□□□ 0.04
UBE3A-226ENST00000637886 CCDC66A2RUB6 948 aa15.29■□□□□ 0.04
UBE3A-226ENST00000637886 E9PSI1 815 aa15.29■□□□□ 0.04
UBE3A-226ENST00000637886 HSPA5P11021 654 aaKnown RBP15.29■□□□□ 0.04
UBE3A-226ENST00000637886 NLRP13Q86W25 1043 aa15.29■□□□□ 0.04
UBE3A-226ENST00000637886 KDM4AO75164 1064 aa15.28■□□□□ 0.04
UBE3A-226ENST00000637886 SLU7O95391 586 aaKnown RBP15.28■□□□□ 0.04
UBE3A-226ENST00000637886 MPHOSPH8Q99549 860 aa15.28■□□□□ 0.04
UBE3A-226ENST00000637886 C16orf71Q8IYS4 520 aaPredicted RBP15.28■□□□□ 0.04
UBE3A-226ENST00000637886 UBTFL1P0CB47 393 aaPredicted RBP15.28■□□□□ 0.04
UBE3A-226ENST00000637886 ATP2B1P20020 1258 aa15.28■□□□□ 0.04
UBE3A-226ENST00000637886 HOOK3Q86VS8 718 aa15.28■□□□□ 0.04
UBE3A-226ENST00000637886 PIBF1Q8WXW3 757 aa15.28■□□□□ 0.04
UBE3A-226ENST00000637886 ERLIN1O75477 346 aa15.27■□□□□ 0.04
UBE3A-226ENST00000637886 FERMT2Q96AC1 680 aa15.27■□□□□ 0.04
UBE3A-226ENST00000637886 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
UBE3A-226ENST00000637886 ZMYND15Q9H091 742 aa15.27■□□□□ 0.04
UBE3A-226ENST00000637886 CCDC144AA2RUR9 1427 aa15.27■□□□□ 0.04
UBE3A-226ENST00000637886 ZNF397Q8NF99 534 aaPredicted RBP15.27■□□□□ 0.03
UBE3A-226ENST00000637886 FSD1Q9BTV5 496 aa15.27■□□□□ 0.03
UBE3A-226ENST00000637886 NOL7Q9UMY1 257 aaKnown RBP15.27■□□□□ 0.03
UBE3A-226ENST00000637886 ZSCAN25Q6NSZ9 544 aa15.26■□□□□ 0.03
UBE3A-226ENST00000637886 FAM13BQ9NYF5 915 aa15.26■□□□□ 0.03
UBE3A-226ENST00000637886 FAM161AQ3B820 660 aa15.26■□□□□ 0.03
UBE3A-226ENST00000637886 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-226ENST00000637886 WDR78Q5VTH9 848 aa15.25■□□□□ 0.03
UBE3A-226ENST00000637886 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
UBE3A-226ENST00000637886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.25■□□□□ 0.03
UBE3A-226ENST00000637886 SEC63Q9UGP8 760 aaKnown RBP15.25■□□□□ 0.03
UBE3A-226ENST00000637886 TRIM5Q9C035 493 aa15.25■□□□□ 0.03
UBE3A-226ENST00000637886 TSNARE1Q96NA8 513 aa15.25■□□□□ 0.03
UBE3A-226ENST00000637886 SERPINC1P01008 464 aa15.24■□□□□ 0.03
UBE3A-226ENST00000637886 DIAPH1O60610 1272 aaKnown RBP15.24■□□□□ 0.03
UBE3A-226ENST00000637886 SSBP05455 408 aaKnown RBP eCLIP15.24■□□□□ 0.03
UBE3A-226ENST00000637886 MTERF4Q7Z6M4 381 aaKnown RBP15.24■□□□□ 0.03
UBE3A-226ENST00000637886 FMN1Q68DA7 1419 aa15.24■□□□□ 0.03
UBE3A-226ENST00000637886 EHMT1Q9H9B1 1298 aa15.24■□□□□ 0.03
UBE3A-226ENST00000637886 CUX2O14529 1486 aa15.24■□□□□ 0.03
UBE3A-226ENST00000637886 USP8P40818 1118 aa15.23■□□□□ 0.03
UBE3A-226ENST00000637886 CDKL5O76039 1030 aa15.23■□□□□ 0.03
UBE3A-226ENST00000637886 DNAJC2Q99543 621 aaKnown RBP15.23■□□□□ 0.03
UBE3A-226ENST00000637886 LRRFIP2Q9Y608 721 aaKnown RBP15.23■□□□□ 0.03
UBE3A-226ENST00000637886 CCDC175P0C221 793 aa15.23■□□□□ 0.03
UBE3A-226ENST00000637886 CCDC39Q9UFE4 941 aa15.23■□□□□ 0.03
UBE3A-226ENST00000637886 SREK1Q8WXA9 508 aaKnown RBP15.23■□□□□ 0.03
UBE3A-226ENST00000637886 MINK1Q8N4C8 1332 aaPredicted RBP15.23■□□□□ 0.03
UBE3A-226ENST00000637886 RAB3IL1Q8TBN0 382 aa15.23■□□□□ 0.03
UBE3A-226ENST00000637886 NUTM2BA6NNL0 878 aaPredicted RBP15.22■□□□□ 0.03
UBE3A-226ENST00000637886 NUTM2EB1AL46 878 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms