RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
CACNA1A-221ENST00000636012 SEPT7Q16181 437 aaKnown RBP19.08■□□□□ 0.65
CACNA1A-221ENST00000636012 SMG6Q86US8 1419 aaKnown RBP19.08■□□□□ 0.65
CACNA1A-221ENST00000636012 SMC2O95347 1197 aa19.08■□□□□ 0.65
CACNA1A-221ENST00000636012 CCDC30Q5VVM6 783 aa19.08■□□□□ 0.64
CACNA1A-221ENST00000636012 PANK1Q8TE04 598 aa19.08■□□□□ 0.64
CACNA1A-221ENST00000636012 ACBD3Q9H3P7 528 aa19.08■□□□□ 0.64
CACNA1A-221ENST00000636012 NUCB2P80303 420 aa19.08■□□□□ 0.64
CACNA1A-221ENST00000636012 FMNL2Q96PY5 1086 aa19.08■□□□□ 0.64
CACNA1A-221ENST00000636012 MATR3P43243 847 aaKnown RBP eCLIP19.07■□□□□ 0.64
CACNA1A-221ENST00000636012 PSMD1Q99460 953 aa19.07■□□□□ 0.64
CACNA1A-221ENST00000636012 NOM1Q5C9Z4 860 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-221ENST00000636012 HSP90B2PQ58FF3 399 aa19.07■□□□□ 0.64
CACNA1A-221ENST00000636012 CLASRPQ8N2M8 674 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-221ENST00000636012 SURF6O75683 361 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-221ENST00000636012 MYL6BP14649 208 aa19.06■□□□□ 0.64
CACNA1A-221ENST00000636012 C22orf23Q9BZE7 217 aa19.06■□□□□ 0.64
CACNA1A-221ENST00000636012 ARGLU1Q9NWB6 273 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-221ENST00000636012 CHMP5Q9NZZ3 219 aa19.06■□□□□ 0.64
CACNA1A-221ENST00000636012 TSPYL1Q9H0U9 437 aa19.05■□□□□ 0.64
CACNA1A-221ENST00000636012 GNL3LQ9NVN8 582 aaKnown RBP19.05■□□□□ 0.64
CACNA1A-221ENST00000636012 TTC16Q8NEE8 873 aa19.05■□□□□ 0.64
CACNA1A-221ENST00000636012 CABP4P57796 275 aa19.05■□□□□ 0.64
CACNA1A-221ENST00000636012 ZSCAN29Q8IWY8 852 aaPredicted RBP19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 SIL1Q9H173 461 aa19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 TOM1L2Q6ZVM7 507 aa19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 PDCL3Q9H2J4 239 aa19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 ZBED9Q6R2W3 1325 aa19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 RSPH6AQ9H0K4 717 aa19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 PUS7Q96PZ0 661 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 FILIP1LQ4L180 1135 aa19.04■□□□□ 0.64
CACNA1A-221ENST00000636012 MPHOSPH10O00566 681 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-221ENST00000636012 ZRSR2Q15696 482 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-221ENST00000636012 PLCD3Q8N3E9 789 aa19.03■□□□□ 0.64
CACNA1A-221ENST00000636012 PRKRIP1Q9H875 184 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-221ENST00000636012 ARHGAP5Q13017 1502 aa19.03■□□□□ 0.64
CACNA1A-221ENST00000636012 MAP4K4O95819 1239 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-221ENST00000636012 SMARCE1Q969G3 411 aa19.03■□□□□ 0.64
CACNA1A-221ENST00000636012 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-221ENST00000636012 PROSER2Q86WR7 435 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-221ENST00000636012 KINO60870 393 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-221ENST00000636012 NF2P35240 595 aa19.02■□□□□ 0.64
CACNA1A-221ENST00000636012 C1orf115Q9H7X2 142 aa19.02■□□□□ 0.63
CACNA1A-221ENST00000636012 RNF214Q8ND24 703 aa19.01■□□□□ 0.63
CACNA1A-221ENST00000636012 STK3Q13188 491 aa19.01■□□□□ 0.63
CACNA1A-221ENST00000636012 CENPHQ9H3R5 247 aa19.01■□□□□ 0.63
CACNA1A-221ENST00000636012 TRIM5Q9C035 493 aa19■□□□□ 0.63
CACNA1A-221ENST00000636012 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
CACNA1A-221ENST00000636012 DCTN1Q14203 1278 aa19■□□□□ 0.63
CACNA1A-221ENST00000636012 DDX24Q9GZR7 859 aaKnown RBP eCLIP19■□□□□ 0.63
CACNA1A-221ENST00000636012 TATP17735 454 aaPredicted RBP19■□□□□ 0.63
CACNA1A-221ENST00000636012 MPHOSPH8Q99549 860 aa19■□□□□ 0.63
CACNA1A-221ENST00000636012 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
CACNA1A-221ENST00000636012 TANGO6Q9C0B7 1094 aa18.99■□□□□ 0.63
CACNA1A-221ENST00000636012 CHMP4BP1P59074 171 aa18.99■□□□□ 0.63
CACNA1A-221ENST00000636012 CCDC69A6NI79 296 aa18.99■□□□□ 0.63
CACNA1A-221ENST00000636012 TXNDC2Q86VQ3 553 aa18.99■□□□□ 0.63
CACNA1A-221ENST00000636012 NUP133Q8WUM0 1156 aa18.99■□□□□ 0.63
CACNA1A-221ENST00000636012 TAX1BP1Q86VP1 789 aa18.99■□□□□ 0.63
CACNA1A-221ENST00000636012 CDC45O75419 566 aa18.98■□□□□ 0.63
CACNA1A-221ENST00000636012 MTHFSP49914 203 aa18.98■□□□□ 0.63
CACNA1A-221ENST00000636012 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
CACNA1A-221ENST00000636012 PIBF1Q8WXW3 757 aa18.98■□□□□ 0.63
CACNA1A-221ENST00000636012 GAS2L2Q8NHY3 880 aa18.98■□□□□ 0.63
CACNA1A-221ENST00000636012 SEPT11Q9NVA2 429 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-221ENST00000636012 RBM25P49756 843 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-221ENST00000636012 HIP1O00291 1037 aa18.96■□□□□ 0.63
CACNA1A-221ENST00000636012 SPC24Q8NBT2 197 aa18.96■□□□□ 0.63
CACNA1A-221ENST00000636012 DEF6Q9H4E7 631 aa18.96■□□□□ 0.63
CACNA1A-221ENST00000636012 BICDL1Q6ZP65 573 aa18.96■□□□□ 0.63
CACNA1A-221ENST00000636012 SPDYE4A6NLX3 237 aa18.96■□□□□ 0.63
CACNA1A-221ENST00000636012 DYDC1Q8WWB3 177 aa18.96■□□□□ 0.63
CACNA1A-221ENST00000636012 CCDC57Q2TAC2 916 aa18.95■□□□□ 0.62
CACNA1A-221ENST00000636012 NASPP49321 788 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-221ENST00000636012 AXDND1Q5T1B0 1012 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-221ENST00000636012 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-221ENST00000636012 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
CACNA1A-221ENST00000636012 GNAI2P04899 355 aa18.95■□□□□ 0.62
CACNA1A-221ENST00000636012 ERLIN2O94905 339 aa18.94■□□□□ 0.62
CACNA1A-221ENST00000636012 CAVIN1Q6NZI2 390 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-221ENST00000636012 ZNF396Q96N95 335 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-221ENST00000636012 ZNHIT6Q9NWK9 470 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-221ENST00000636012 MYCNP04198 464 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-221ENST00000636012 NEK4P51957 841 aa18.94■□□□□ 0.62
CACNA1A-221ENST00000636012 ZNF76P36508 570 aa18.94■□□□□ 0.62
CACNA1A-221ENST00000636012 FAM43AQ8N2R8 423 aa18.94■□□□□ 0.62
CACNA1A-221ENST00000636012 GNAI3P08754 354 aa18.93■□□□□ 0.62
CACNA1A-221ENST00000636012 CNTLNQ9NXG0 1405 aa18.93■□□□□ 0.62
CACNA1A-221ENST00000636012 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
CACNA1A-221ENST00000636012 STK38Q15208 465 aa18.93■□□□□ 0.62
CACNA1A-221ENST00000636012 SOGA3Q5TF21 947 aa18.93■□□□□ 0.62
CACNA1A-221ENST00000636012 NEBLO76041 1014 aa18.93■□□□□ 0.62
CACNA1A-221ENST00000636012 SERPINC1P01008 464 aa18.93■□□□□ 0.62
CACNA1A-221ENST00000636012 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
CACNA1A-221ENST00000636012 SSBP05455 408 aaKnown RBP eCLIP18.92■□□□□ 0.62
CACNA1A-221ENST00000636012 USP5P45974 858 aa18.92■□□□□ 0.62
CACNA1A-221ENST00000636012 STIM1Q13586 685 aa18.92■□□□□ 0.62
CACNA1A-221ENST00000636012 ERCC4Q92889 916 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-221ENST00000636012 NACAP1Q9BZK3 213 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms