RNA–Protein interactions for RNA: ENST00000628733.2

UBE3A-216, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-216ENST00000628733 MPNDQ8N594 471 aa7.1□□□□□ -1.27
UBE3A-216ENST00000628733 CABLES1Q8TDN4 633 aa7.1□□□□□ -1.27
UBE3A-216ENST00000628733 LIMD1Q9UGP4 676 aa7.1□□□□□ -1.27
UBE3A-216ENST00000628733 TLL2Q9Y6L7 1015 aa7.1□□□□□ -1.27
UBE3A-216ENST00000628733 TERTO14746 1132 aaKnown RBP7.09□□□□□ -1.27
UBE3A-216ENST00000628733 PER1O15534 1290 aaPredicted RBP7.09□□□□□ -1.27
UBE3A-216ENST00000628733 QPCTQ16769 361 aa7.09□□□□□ -1.27
UBE3A-216ENST00000628733 PRPF38BQ5VTL8 546 aaKnown RBP7.09□□□□□ -1.27
UBE3A-216ENST00000628733 MYSM1Q5VVJ2 828 aa7.09□□□□□ -1.27
UBE3A-216ENST00000628733 RIC3Q7Z5B4 369 aa7.09□□□□□ -1.27
UBE3A-216ENST00000628733 KLF16Q9BXK1 252 aaPredicted RBP7.09□□□□□ -1.27
UBE3A-216ENST00000628733 MAP10Q9P2G4 905 aa7.09□□□□□ -1.27
UBE3A-216ENST00000628733 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
UBE3A-216ENST00000628733 BMP1P13497 986 aa7.08□□□□□ -1.28
UBE3A-216ENST00000628733 PDE4DQ08499 809 aa7.08□□□□□ -1.28
UBE3A-216ENST00000628733 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
UBE3A-216ENST00000628733 DIXDC1Q155Q3 683 aa7.07□□□□□ -1.28
UBE3A-216ENST00000628733 TUSC1Q2TAM9 212 aa7.07□□□□□ -1.28
UBE3A-216ENST00000628733 C4orf48Q5BLP8 95 aa7.07□□□□□ -1.28
UBE3A-216ENST00000628733 ZBTB3Q9H5J0 574 aa7.07□□□□□ -1.28
UBE3A-216ENST00000628733 SENP2Q9HC62 589 aa7.07□□□□□ -1.28
UBE3A-216ENST00000628733 VARSP26640 1264 aaKnown RBP7.06□□□□□ -1.28
UBE3A-216ENST00000628733 FOXJ1Q92949 421 aa7.06□□□□□ -1.28
UBE3A-216ENST00000628733 LILRB3O75022 631 aa7.05□□□□□ -1.28
UBE3A-216ENST00000628733 CDK15Q96Q40 435 aa7.05□□□□□ -1.28
UBE3A-216ENST00000628733 SLC24A3Q9HC58 644 aa7.05□□□□□ -1.28
UBE3A-216ENST00000628733 CAPN5O15484 640 aaPredicted RBP7.04□□□□□ -1.28
UBE3A-216ENST00000628733 FBXO31Q5XUX0 539 aaPredicted RBP7.04□□□□□ -1.28
UBE3A-216ENST00000628733 KIFC2Q96AC6 838 aa7.04□□□□□ -1.28
UBE3A-216ENST00000628733 WASF2Q9Y6W5 498 aa7.04□□□□□ -1.28
UBE3A-216ENST00000628733 TIMP2P16035 220 aa7.03□□□□□ -1.28
UBE3A-216ENST00000628733 RTL5Q5HYW3 569 aaPredicted RBP7.03□□□□□ -1.28
UBE3A-216ENST00000628733 SLC16A10Q8TF71 515 aa7.03□□□□□ -1.28
UBE3A-216ENST00000628733 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
UBE3A-216ENST00000628733 GRM5P41594 1212 aa7.02□□□□□ -1.29
UBE3A-216ENST00000628733 NNTQ13423 1086 aa7.02□□□□□ -1.29
UBE3A-216ENST00000628733 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
UBE3A-216ENST00000628733 C1QTNF2Q9BXJ5 285 aa7.02□□□□□ -1.29
UBE3A-216ENST00000628733 ADH1CP00326 375 aa7.01□□□□□ -1.29
UBE3A-216ENST00000628733 NR3C2P08235 984 aa7.01□□□□□ -1.29
UBE3A-216ENST00000628733 CTHP32929 405 aa7.01□□□□□ -1.29
UBE3A-216ENST00000628733 SH3RF1Q7Z6J0 888 aa7.01□□□□□ -1.29
UBE3A-216ENST00000628733 ZSCAN1Q8NBB4 408 aa7□□□□□ -1.29
UBE3A-216ENST00000628733 ZFP42Q96MM3 310 aa7□□□□□ -1.29
UBE3A-216ENST00000628733 FAM174AQ8TBP5 190 aa6.99□□□□□ -1.29
UBE3A-216ENST00000628733 PLEKHG3A1L390 1219 aa6.98□□□□□ -1.29
UBE3A-216ENST00000628733 SH3BP5LQ7L8J4 393 aa6.98□□□□□ -1.29
UBE3A-216ENST00000628733 NXF1Q9UBU9 619 aaKnown RBP6.98□□□□□ -1.29
UBE3A-216ENST00000628733 H3BM21 787 aa6.97□□□□□ -1.29
UBE3A-216ENST00000628733 CLK2P49760 499 aaKnown RBP6.97□□□□□ -1.29
UBE3A-216ENST00000628733 WDR4P57081 412 aaKnown RBP6.97□□□□□ -1.29
UBE3A-216ENST00000628733 MRPL14Q6P1L8 145 aaKnown RBP6.97□□□□□ -1.29
UBE3A-216ENST00000628733 ITPKCQ96DU7 683 aa6.97□□□□□ -1.29
UBE3A-216ENST00000628733 ZFAND3Q9H8U3 227 aa6.97□□□□□ -1.29
UBE3A-216ENST00000628733 ERBB4Q15303 1308 aa6.97□□□□□ -1.29
UBE3A-216ENST00000628733 GMPRP36959 345 aa6.96□□□□□ -1.3
UBE3A-216ENST00000628733 SUZ12Q15022 739 aaKnown RBP6.96□□□□□ -1.3
UBE3A-216ENST00000628733 NPAS3Q8IXF0 933 aa6.96□□□□□ -1.3
UBE3A-216ENST00000628733 NUTM2BA6NNL0 878 aaPredicted RBP6.95□□□□□ -1.3
UBE3A-216ENST00000628733 NUTM2EB1AL46 878 aaPredicted RBP6.95□□□□□ -1.3
UBE3A-216ENST00000628733 NR5A1Q13285 461 aa6.95□□□□□ -1.3
UBE3A-216ENST00000628733 NUTM2DQ5VT03 806 aaPredicted RBP6.95□□□□□ -1.3
UBE3A-216ENST00000628733 NUTM2AQ8IVF1 878 aaPredicted RBP6.95□□□□□ -1.3
UBE3A-216ENST00000628733 TRMT44Q8IYL2 757 aaKnown RBP6.95□□□□□ -1.3
UBE3A-216ENST00000628733 IRF7Q92985 503 aa6.95□□□□□ -1.3
UBE3A-216ENST00000628733 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
UBE3A-216ENST00000628733 POLR3EQ9NVU0 708 aa6.95□□□□□ -1.3
UBE3A-216ENST00000628733 SOBPA7XYQ1 873 aa6.94□□□□□ -1.3
UBE3A-216ENST00000628733 ZIC2O95409 532 aaPredicted RBP6.94□□□□□ -1.3
UBE3A-216ENST00000628733 VEGFBP49765 207 aa6.94□□□□□ -1.3
UBE3A-216ENST00000628733 CTDSPL2Q05D32 466 aa6.94□□□□□ -1.3
UBE3A-216ENST00000628733 BPHLQ86WA6 291 aaPredicted RBP6.94□□□□□ -1.3
UBE3A-216ENST00000628733 OCSTAMPQ9BR26 566 aa6.94□□□□□ -1.3
UBE3A-216ENST00000628733 MAP4K5Q9Y4K4 846 aa6.94□□□□□ -1.3
UBE3A-216ENST00000628733 TSC1Q92574 1164 aa6.93□□□□□ -1.3
UBE3A-216ENST00000628733 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBE3A-216ENST00000628733 GPBP1L1Q9HC44 474 aaPredicted RBP6.93□□□□□ -1.3
UBE3A-216ENST00000628733 ARID5BQ14865 1188 aa6.92□□□□□ -1.3
UBE3A-216ENST00000628733 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
UBE3A-216ENST00000628733 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
UBE3A-216ENST00000628733 FAM117AQ9C073 453 aa6.92□□□□□ -1.3
UBE3A-216ENST00000628733 VSIG8P0DPA2 414 aa6.91□□□□□ -1.3
UBE3A-216ENST00000628733 ERFEQ4G0M1 354 aa6.91□□□□□ -1.3
UBE3A-216ENST00000628733 PPP2R2DQ66LE6 453 aa6.91□□□□□ -1.3
UBE3A-216ENST00000628733 ARMC2Q8NEN0 867 aa6.91□□□□□ -1.3
UBE3A-216ENST00000628733 HELBQ8NG08 1087 aaPredicted RBP6.91□□□□□ -1.3
UBE3A-216ENST00000628733 LRRN4Q8WUT4 740 aa6.91□□□□□ -1.3
UBE3A-216ENST00000628733 RSPH6AQ9H0K4 717 aa6.91□□□□□ -1.3
UBE3A-216ENST00000628733 SKIV2LQ15477 1246 aaKnown RBP6.9□□□□□ -1.3
UBE3A-216ENST00000628733 SH3D19Q5HYK7 790 aa6.9□□□□□ -1.3
UBE3A-216ENST00000628733 NBPF14Q5TI25 921 aa6.9□□□□□ -1.3
UBE3A-216ENST00000628733 KDM4CQ9H3R0 1056 aa6.9□□□□□ -1.3
UBE3A-216ENST00000628733 FSHRP23945 695 aa6.89□□□□□ -1.31
UBE3A-216ENST00000628733 SCARF1Q14162 830 aa6.89□□□□□ -1.31
UBE3A-216ENST00000628733 GPKOWQ92917 476 aaPredicted RBP eCLIP6.89□□□□□ -1.31
UBE3A-216ENST00000628733 SOS2Q07890 1332 aaPredicted RBP6.88□□□□□ -1.31
UBE3A-216ENST00000628733 AGERQ15109 404 aa6.88□□□□□ -1.31
UBE3A-216ENST00000628733 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
UBE3A-216ENST00000628733 MAGEB6P1A0A0J9YX57 407 aa6.87□□□□□ -1.31
UBE3A-216ENST00000628733 C6orf118Q5T5N4 469 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms