RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 Q8N3U1 123 aa8.06□□□□□ -1.12
PTP4A2-220ENST00000627328 MPNDQ8N594 471 aa8.05□□□□□ -1.12
PTP4A2-220ENST00000627328 GPR161Q8N6U8 529 aaKnown RBP8.05□□□□□ -1.12
PTP4A2-220ENST00000627328 COL25A1Q9BXS0 654 aaPredicted RBP8.05□□□□□ -1.12
PTP4A2-220ENST00000627328 MAP2K5Q13163 448 aa8.04□□□□□ -1.12
PTP4A2-220ENST00000627328 PLA2G4EQ3MJ16 856 aa8.04□□□□□ -1.12
PTP4A2-220ENST00000627328 SPOCK3Q9BQ16 436 aa8.04□□□□□ -1.12
PTP4A2-220ENST00000627328 SLURP2P0DP57 97 aa8.03□□□□□ -1.12
PTP4A2-220ENST00000627328 JUNDP17535 347 aa8.03□□□□□ -1.12
PTP4A2-220ENST00000627328 SH3BP2P78314 561 aa8.03□□□□□ -1.12
PTP4A2-220ENST00000627328 MINK1Q8N4C8 1332 aaPredicted RBP8.03□□□□□ -1.12
PTP4A2-220ENST00000627328 K7ELQ4 463 aaPredicted RBP8.02□□□□□ -1.13
PTP4A2-220ENST00000627328 TLL2Q9Y6L7 1015 aa8.02□□□□□ -1.13
PTP4A2-220ENST00000627328 IRF6O14896 467 aa8.01□□□□□ -1.13
PTP4A2-220ENST00000627328 UPP2O95045 317 aa8.01□□□□□ -1.13
PTP4A2-220ENST00000627328 C6orf118Q5T5N4 469 aa8.01□□□□□ -1.13
PTP4A2-220ENST00000627328 GALNT6Q8NCL4 622 aa8.01□□□□□ -1.13
PTP4A2-220ENST00000627328 NUDT12Q9BQG2 462 aa8.01□□□□□ -1.13
PTP4A2-220ENST00000627328 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
PTP4A2-220ENST00000627328 WHAMMQ8TF30 809 aa8□□□□□ -1.13
PTP4A2-220ENST00000627328 NANOS1Q8WY41 292 aaKnown RBP8□□□□□ -1.13
PTP4A2-220ENST00000627328 KLF16Q9BXK1 252 aaPredicted RBP8□□□□□ -1.13
PTP4A2-220ENST00000627328 PTCRAQ6ISU1 281 aaPredicted RBP7.99□□□□□ -1.13
PTP4A2-220ENST00000627328 PHF20L1A8MW92 1017 aa7.97□□□□□ -1.13
PTP4A2-220ENST00000627328 BMP2P12643 396 aa7.97□□□□□ -1.13
PTP4A2-220ENST00000627328 MAP3K10Q02779 954 aa7.97□□□□□ -1.13
PTP4A2-220ENST00000627328 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
PTP4A2-220ENST00000627328 PHOX2BQ99453 314 aa7.97□□□□□ -1.13
PTP4A2-220ENST00000627328 KDM4AO75164 1064 aa7.96□□□□□ -1.14
PTP4A2-220ENST00000627328 USP46P62068 366 aa7.96□□□□□ -1.14
PTP4A2-220ENST00000627328 RNFT1Q5M7Z0 435 aa7.96□□□□□ -1.14
PTP4A2-220ENST00000627328 LCE3BQ5TA77 95 aa7.96□□□□□ -1.14
PTP4A2-220ENST00000627328 SOS2Q07890 1332 aaPredicted RBP7.96□□□□□ -1.14
PTP4A2-220ENST00000627328 ZIC2O95409 532 aaPredicted RBP7.95□□□□□ -1.14
PTP4A2-220ENST00000627328 PROCP04070 461 aa7.95□□□□□ -1.14
PTP4A2-220ENST00000627328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.14
PTP4A2-220ENST00000627328 NLRP7Q8WX94 980 aa7.95□□□□□ -1.14
PTP4A2-220ENST00000627328 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
PTP4A2-220ENST00000627328 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
PTP4A2-220ENST00000627328 ENAMQ9NRM1 1142 aa7.94□□□□□ -1.14
PTP4A2-220ENST00000627328 ZMYND10O75800 440 aa7.93□□□□□ -1.14
PTP4A2-220ENST00000627328 BARGINQ6ZT62 677 aa7.93□□□□□ -1.14
PTP4A2-220ENST00000627328 CCDC102AQ96A19 550 aa7.93□□□□□ -1.14
PTP4A2-220ENST00000627328 SLC24A1O60721 1099 aa7.92□□□□□ -1.14
PTP4A2-220ENST00000627328 CCNYL3P0C7X3 344 aa7.92□□□□□ -1.14
PTP4A2-220ENST00000627328 PTSQ03393 145 aa7.92□□□□□ -1.14
PTP4A2-220ENST00000627328 KRI1Q8N9T8 703 aaKnown RBP7.92□□□□□ -1.14
PTP4A2-220ENST00000627328 ZC3H15Q8WU90 426 aaKnown RBP7.92□□□□□ -1.14
PTP4A2-220ENST00000627328 ITGB2P05107 769 aa7.91□□□□□ -1.14
PTP4A2-220ENST00000627328 CD46P15529 392 aa7.91□□□□□ -1.14
PTP4A2-220ENST00000627328 CLCN1P35523 988 aa7.91□□□□□ -1.14
PTP4A2-220ENST00000627328 ITPKCQ96DU7 683 aa7.91□□□□□ -1.14
PTP4A2-220ENST00000627328 UNC93B1Q9H1C4 597 aa7.91□□□□□ -1.14
PTP4A2-220ENST00000627328 ZFAND3Q9H8U3 227 aa7.91□□□□□ -1.14
PTP4A2-220ENST00000627328 BTBD11A6QL63 1104 aa7.9□□□□□ -1.14
PTP4A2-220ENST00000627328 LINC01559Q495D7 138 aa7.9□□□□□ -1.14
PTP4A2-220ENST00000627328 RETREG3Q86VR2 466 aa7.9□□□□□ -1.14
PTP4A2-220ENST00000627328 ZNF511Q8NB15 262 aa7.9□□□□□ -1.14
PTP4A2-220ENST00000627328 FAM174AQ8TBP5 190 aa7.9□□□□□ -1.14
PTP4A2-220ENST00000627328 BAP1Q92560 729 aa7.9□□□□□ -1.14
PTP4A2-220ENST00000627328 GPCPD1Q9NPB8 672 aa7.9□□□□□ -1.14
PTP4A2-220ENST00000627328 SPTLC1O15269 473 aa7.89□□□□□ -1.15
PTP4A2-220ENST00000627328 MEIOBQ8N635 442 aa7.89□□□□□ -1.15
PTP4A2-220ENST00000627328 BEND7Q8N7W2 519 aaPredicted RBP7.89□□□□□ -1.15
PTP4A2-220ENST00000627328 ADAMTS2O95450 1211 aa7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 MS4A1P11836 297 aa7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 MDM2Q00987 491 aaPredicted RBP7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 NR5A1Q13285 461 aa7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 LYPD4Q6UWN0 246 aa7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 SV2AQ7L0J3 742 aa7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 PODNQ7Z5L7 613 aa7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 CCDC155Q8N6L0 562 aa7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 CDK15Q96Q40 435 aa7.88□□□□□ -1.15
PTP4A2-220ENST00000627328 HOXA2O43364 376 aa7.87□□□□□ -1.15
PTP4A2-220ENST00000627328 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
PTP4A2-220ENST00000627328 TTLL8A6PVC2 850 aa7.86□□□□□ -1.15
PTP4A2-220ENST00000627328 BAG6P46379 1132 aa7.86□□□□□ -1.15
PTP4A2-220ENST00000627328 SRSF11Q05519 484 aaKnown RBP7.86□□□□□ -1.15
PTP4A2-220ENST00000627328 VWA5B2Q8N398 1253 aa7.86□□□□□ -1.15
PTP4A2-220ENST00000627328 HLA-CQ95604 372 aa7.86□□□□□ -1.15
PTP4A2-220ENST00000627328 EVA1BQ9NVM1 165 aa7.86□□□□□ -1.15
PTP4A2-220ENST00000627328 CELA2BP08218 269 aaPredicted RBP7.85□□□□□ -1.15
PTP4A2-220ENST00000627328 AMHR2Q16671 573 aa7.85□□□□□ -1.15
PTP4A2-220ENST00000627328 PTPRNQ16849 979 aa7.85□□□□□ -1.15
PTP4A2-220ENST00000627328 BCANQ96GW7 911 aa7.85□□□□□ -1.15
PTP4A2-220ENST00000627328 KRTAP4-12Q9BQ66 201 aa7.85□□□□□ -1.15
PTP4A2-220ENST00000627328 FAM217BQ9NTX9 383 aaPredicted RBP7.85□□□□□ -1.15
PTP4A2-220ENST00000627328 CNTNAP5Q8WYK1 1306 aa7.84□□□□□ -1.15
PTP4A2-220ENST00000627328 CDC14CA4D256 554 aa7.84□□□□□ -1.15
PTP4A2-220ENST00000627328 ITGA6P23229 1130 aa7.84□□□□□ -1.15
PTP4A2-220ENST00000627328 ARID5BQ14865 1188 aa7.84□□□□□ -1.15
PTP4A2-220ENST00000627328 KCNH2Q12809 1159 aa7.83□□□□□ -1.16
PTP4A2-220ENST00000627328 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
PTP4A2-220ENST00000627328 SLC35F4A4IF30 521 aa7.82□□□□□ -1.16
PTP4A2-220ENST00000627328 AK7Q96M32 723 aa7.82□□□□□ -1.16
PTP4A2-220ENST00000627328 NR3C2P08235 984 aa7.81□□□□□ -1.16
PTP4A2-220ENST00000627328 GUCA2AQ02747 115 aa7.8□□□□□ -1.16
PTP4A2-220ENST00000627328 TTLL12Q14166 644 aaPredicted RBP7.8□□□□□ -1.16
PTP4A2-220ENST00000627328 FURINP09958 794 aa7.79□□□□□ -1.16
PTP4A2-220ENST00000627328 SSTR3P32745 418 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms