RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 LRRC37A3O60309 1634 aa8.27□□□□□ -1.09
FMR1-217ENST00000620828 PPIP5K1Q6PFW1 1433 aa8.27□□□□□ -1.09
FMR1-217ENST00000620828 CPDO75976 1380 aa8.27□□□□□ -1.09
FMR1-217ENST00000620828 USP31Q70CQ4 1352 aa8.26□□□□□ -1.09
FMR1-217ENST00000620828 CENPJQ9HC77 1338 aaPredicted RBP8.26□□□□□ -1.09
FMR1-217ENST00000620828 ARHGEF10O15013 1369 aa8.26□□□□□ -1.09
FMR1-217ENST00000620828 RREB1Q92766 1687 aa8.26□□□□□ -1.09
FMR1-217ENST00000620828 PHF8Q9UPP1 1060 aa8.26□□□□□ -1.09
FMR1-217ENST00000620828 KDM2AQ9Y2K7 1162 aa8.26□□□□□ -1.09
FMR1-217ENST00000620828 ROCK2O75116 1388 aaKnown RBP8.25□□□□□ -1.09
FMR1-217ENST00000620828 EP400Q96L91 3159 aa8.25□□□□□ -1.09
FMR1-217ENST00000620828 CDK19Q9BWU1 502 aa8.25□□□□□ -1.09
FMR1-217ENST00000620828 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
FMR1-217ENST00000620828 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
FMR1-217ENST00000620828 ONECUT3O60422 494 aaPredicted RBP8.24□□□□□ -1.09
FMR1-217ENST00000620828 NUDT16Q96DE0 195 aaKnown RBP8.24□□□□□ -1.09
FMR1-217ENST00000620828 SOCS7O14512 581 aa8.24□□□□□ -1.09
FMR1-217ENST00000620828 RGPD2P0DJD1 1756 aa8.23□□□□□ -1.09
FMR1-217ENST00000620828 RGPD1P0DJD0 1748 aa8.23□□□□□ -1.09
FMR1-217ENST00000620828 ESCO1Q5FWF5 840 aa8.23□□□□□ -1.09
FMR1-217ENST00000620828 KRT28Q7Z3Y7 464 aa8.23□□□□□ -1.09
FMR1-217ENST00000620828 MINK1Q8N4C8 1332 aaPredicted RBP8.23□□□□□ -1.09
FMR1-217ENST00000620828 NINLQ9Y2I6 1382 aa8.22□□□□□ -1.09
FMR1-217ENST00000620828 COL24A1Q17RW2 1714 aa8.22□□□□□ -1.09
FMR1-217ENST00000620828 NCAPD2Q15021 1401 aa8.22□□□□□ -1.09
FMR1-217ENST00000620828 ACEP12821 1306 aa8.21□□□□□ -1.09
FMR1-217ENST00000620828 FOXO3O43524 673 aa8.21□□□□□ -1.09
FMR1-217ENST00000620828 CCDC61Q9Y6R9 512 aa8.21□□□□□ -1.1
FMR1-217ENST00000620828 COL5A2P05997 1499 aaPredicted RBP8.21□□□□□ -1.1
FMR1-217ENST00000620828 DISP2A7MBM2 1401 aa8.21□□□□□ -1.1
FMR1-217ENST00000620828 ATAD2Q6PL18 1390 aa8.21□□□□□ -1.1
FMR1-217ENST00000620828 PKD1L3Q7Z443 1732 aa8.2□□□□□ -1.1
FMR1-217ENST00000620828 AFF2P51816 1311 aa8.2□□□□□ -1.1
FMR1-217ENST00000620828 EDC4Q6P2E9 1401 aaKnown RBP8.2□□□□□ -1.1
FMR1-217ENST00000620828 TONSLQ96HA7 1378 aa8.2□□□□□ -1.1
FMR1-217ENST00000620828 SCAF1Q9H7N4 1312 aaKnown RBP8.2□□□□□ -1.1
FMR1-217ENST00000620828 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
FMR1-217ENST00000620828 HIRIP3Q9BW71 556 aaPredicted RBP8.2□□□□□ -1.1
FMR1-217ENST00000620828 NUP188Q5SRE5 1749 aa8.19□□□□□ -1.1
FMR1-217ENST00000620828 USP47Q96K76 1375 aa8.19□□□□□ -1.1
FMR1-217ENST00000620828 POGKQ9P215 609 aa8.19□□□□□ -1.1
FMR1-217ENST00000620828 BCL9O00512 1426 aa8.19□□□□□ -1.1
FMR1-217ENST00000620828 A0A1W2PP64 1363 aa8.18□□□□□ -1.1
FMR1-217ENST00000620828 ZNF772Q68DY9 489 aaPredicted RBP8.18□□□□□ -1.1
FMR1-217ENST00000620828 SMG6Q86US8 1419 aaKnown RBP8.18□□□□□ -1.1
FMR1-217ENST00000620828 FAM83GA6ND36 823 aa8.18□□□□□ -1.1
FMR1-217ENST00000620828 PSME1Q06323 249 aa8.18□□□□□ -1.1
FMR1-217ENST00000620828 QSER1Q2KHR3 1735 aa8.18□□□□□ -1.1
FMR1-217ENST00000620828 EVC2Q86UK5 1308 aa8.18□□□□□ -1.1
FMR1-217ENST00000620828 NHSQ6T4R5 1651 aa8.18□□□□□ -1.1
FMR1-217ENST00000620828 PAPPAQ13219 1627 aa8.17□□□□□ -1.1
FMR1-217ENST00000620828 CABP2Q9NPB3 220 aa8.17□□□□□ -1.1
FMR1-217ENST00000620828 AATKQ6ZMQ8 1374 aa8.17□□□□□ -1.1
FMR1-217ENST00000620828 SAFB2Q14151 953 aaKnown RBP eCLIP8.17□□□□□ -1.1
FMR1-217ENST00000620828 VPS72Q15906 364 aa8.17□□□□□ -1.1
FMR1-217ENST00000620828 MAP2P11137 1827 aaKnown RBP8.17□□□□□ -1.1
FMR1-217ENST00000620828 NEUROD1Q13562 356 aa8.17□□□□□ -1.1
FMR1-217ENST00000620828 ANKRD36BQ8N2N9 1353 aa8.16□□□□□ -1.1
FMR1-217ENST00000620828 XPCQ01831 940 aaPredicted RBP8.16□□□□□ -1.1
FMR1-217ENST00000620828 PMFBP1Q8TBY8 1022 aa8.16□□□□□ -1.1
FMR1-217ENST00000620828 TTC21AQ8NDW8 1320 aa8.16□□□□□ -1.1
FMR1-217ENST00000620828 ADAMTS7Q9UKP4 1686 aa8.16□□□□□ -1.1
FMR1-217ENST00000620828 UNC5CLQ8IV45 518 aa8.15□□□□□ -1.1
FMR1-217ENST00000620828 TOGARAM1Q9Y4F4 1720 aa8.15□□□□□ -1.1
FMR1-217ENST00000620828 CICQ96RK0 1608 aaPredicted RBP8.15□□□□□ -1.1
FMR1-217ENST00000620828 SPATA31A5Q5VU36 1347 aa8.15□□□□□ -1.1
FMR1-217ENST00000620828 TTC21BQ7Z4L5 1316 aa8.15□□□□□ -1.1
FMR1-217ENST00000620828 SPATA31A7Q8IWB4 1347 aa8.15□□□□□ -1.1
FMR1-217ENST00000620828 CABP1Q9NZU7 370 aa8.15□□□□□ -1.1
FMR1-217ENST00000620828 VIRMAQ69YN4 1812 aaKnown RBP8.15□□□□□ -1.11
FMR1-217ENST00000620828 LY75O60449 1722 aa8.15□□□□□ -1.11
FMR1-217ENST00000620828 NUTM2FA1L443 756 aa8.14□□□□□ -1.11
FMR1-217ENST00000620828 KIAA0232Q92628 1395 aa8.14□□□□□ -1.11
FMR1-217ENST00000620828 CASZ1Q86V15 1759 aa8.14□□□□□ -1.11
FMR1-217ENST00000620828 CARD11Q9BXL7 1154 aa8.14□□□□□ -1.11
FMR1-217ENST00000620828 ST20-MTHFSA0A0A6YYL1 179 aa8.14□□□□□ -1.11
FMR1-217ENST00000620828 RBM6P78332 1123 aaKnown RBP8.14□□□□□ -1.11
FMR1-217ENST00000620828 ZNF831Q5JPB2 1677 aa8.13□□□□□ -1.11
FMR1-217ENST00000620828 ZNF692Q9BU19 519 aaPredicted RBP8.13□□□□□ -1.11
FMR1-217ENST00000620828 GJD4Q96KN9 370 aaPredicted RBP8.13□□□□□ -1.11
FMR1-217ENST00000620828 LRP5O75197 1615 aa8.12□□□□□ -1.11
FMR1-217ENST00000620828 CABLES1Q8TDN4 633 aa8.12□□□□□ -1.11
FMR1-217ENST00000620828 SPATA31A1Q5TZJ5 1347 aa8.12□□□□□ -1.11
FMR1-217ENST00000620828 TRPC5Q9UL62 973 aaPredicted RBP8.12□□□□□ -1.11
FMR1-217ENST00000620828 ARHGEF25Q86VW2 580 aa8.12□□□□□ -1.11
FMR1-217ENST00000620828 USP21Q9UK80 565 aa8.12□□□□□ -1.11
FMR1-217ENST00000620828 KTN1Q86UP2 1357 aaKnown RBP8.11□□□□□ -1.11
FMR1-217ENST00000620828 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
FMR1-217ENST00000620828 TUBGCP6Q96RT7 1819 aa8.11□□□□□ -1.11
FMR1-217ENST00000620828 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
FMR1-217ENST00000620828 PCGF6Q9BYE7 350 aa8.11□□□□□ -1.11
FMR1-217ENST00000620828 QTRT2Q9H974 415 aaKnown RBP8.11□□□□□ -1.11
FMR1-217ENST00000620828 BLMP54132 1417 aaPredicted RBP8.11□□□□□ -1.11
FMR1-217ENST00000620828 CRB1P82279 1406 aa8.11□□□□□ -1.11
FMR1-217ENST00000620828 C11orf95C9JLR9 678 aaPredicted RBP8.1□□□□□ -1.11
FMR1-217ENST00000620828 UPF1Q92900 1129 aaKnown RBP eCLIP8.1□□□□□ -1.11
FMR1-217ENST00000620828 C8orf37Q96NL8 207 aa8.1□□□□□ -1.11
FMR1-217ENST00000620828 RXRBP28702 533 aa8.1□□□□□ -1.11
FMR1-217ENST00000620828 RTL1A6NKG5 1358 aa8.1□□□□□ -1.11
FMR1-217ENST00000620828 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms