RNA–Protein interactions for RNA: ENST00000620412.4

PMPCA-210, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-210ENST00000620412 FAM83GA6ND36 823 aa30.34■■■□□ 2.45
PMPCA-210ENST00000620412 CCDC9Q9Y3X0 531 aaKnown RBP30.34■■■□□ 2.45
PMPCA-210ENST00000620412 VPS72Q15906 364 aa30.32■■■□□ 2.44
PMPCA-210ENST00000620412 PAK3O75914 559 aaPredicted RBP30.31■■■□□ 2.44
PMPCA-210ENST00000620412 NUDT16Q96DE0 195 aaKnown RBP30.3■■■□□ 2.44
PMPCA-210ENST00000620412 SEPT12Q8IYM1 358 aa30.28■■■□□ 2.44
PMPCA-210ENST00000620412 GLI3P10071 1580 aa30.28■■■□□ 2.44
PMPCA-210ENST00000620412 CDK19Q9BWU1 502 aa30.27■■■□□ 2.44
PMPCA-210ENST00000620412 CCDC125Q86Z20 511 aa30.26■■■□□ 2.43
PMPCA-210ENST00000620412 EP400Q96L91 3159 aa30.26■■■□□ 2.43
PMPCA-210ENST00000620412 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.25■■■□□ 2.43
PMPCA-210ENST00000620412 BTG4Q9NY30 223 aa30.24■■■□□ 2.43
PMPCA-210ENST00000620412 TRPM3Q9HCF6 1732 aaPredicted RBP30.23■■■□□ 2.43
PMPCA-210ENST00000620412 EVC2Q86UK5 1308 aa30.22■■■□□ 2.43
PMPCA-210ENST00000620412 SLC24A1O60721 1099 aa30.22■■■□□ 2.43
PMPCA-210ENST00000620412 POLR3AO14802 1390 aaPredicted RBP30.2■■■□□ 2.43
PMPCA-210ENST00000620412 ONECUT3O60422 494 aaPredicted RBP30.2■■■□□ 2.43
PMPCA-210ENST00000620412 USP47Q96K76 1375 aa30.19■■■□□ 2.42
PMPCA-210ENST00000620412 CCDC61Q9Y6R9 512 aa30.19■■■□□ 2.42
PMPCA-210ENST00000620412 A0A0G2JS52 829 aa30.18■■■□□ 2.42
PMPCA-210ENST00000620412 MYT1Q01538 1121 aa30.18■■■□□ 2.42
PMPCA-210ENST00000620412 ZRANB1Q9UGI0 708 aa30.17■■■□□ 2.42
PMPCA-210ENST00000620412 ALS2Q96Q42 1657 aa30.17■■■□□ 2.42
PMPCA-210ENST00000620412 ABCA3Q99758 1704 aa30.16■■■□□ 2.42
PMPCA-210ENST00000620412 FAM98CQ17RN3 349 aaKnown RBP30.16■■■□□ 2.42
PMPCA-210ENST00000620412 NUTM2GQ5VZR2 741 aa30.16■■■□□ 2.42
PMPCA-210ENST00000620412 KRT27Q7Z3Y8 459 aa30.16■■■□□ 2.42
PMPCA-210ENST00000620412 PLCH1Q4KWH8 1693 aa30.15■■■□□ 2.42
PMPCA-210ENST00000620412 PUS7Q96PZ0 661 aaKnown RBP30.15■■■□□ 2.42
PMPCA-210ENST00000620412 ACEP12821 1306 aa30.15■■■□□ 2.42
PMPCA-210ENST00000620412 PLEKHG3A1L390 1219 aa30.14■■■□□ 2.42
PMPCA-210ENST00000620412 PRDM11Q9NQV5 511 aa30.14■■■□□ 2.42
PMPCA-210ENST00000620412 PPIP5K1Q6PFW1 1433 aa30.13■■■□□ 2.41
PMPCA-210ENST00000620412 SRPK2P78362 688 aaKnown RBP30.13■■■□□ 2.41
PMPCA-210ENST00000620412 TESK2Q96S53 571 aa30.12■■■□□ 2.41
PMPCA-210ENST00000620412 NWD2Q9ULI1 1742 aa30.12■■■□□ 2.41
PMPCA-210ENST00000620412 BRD4O60885 1362 aaPredicted RBP30.12■■■□□ 2.41
PMPCA-210ENST00000620412 SRCAPQ6ZRS2 3230 aa30.12■■■□□ 2.41
PMPCA-210ENST00000620412 BLMP54132 1417 aaPredicted RBP30.12■■■□□ 2.41
PMPCA-210ENST00000620412 AKAP12Q02952 1782 aa30.11■■■□□ 2.41
PMPCA-210ENST00000620412 SF3B2Q13435 895 aaKnown RBP30.1■■■□□ 2.41
PMPCA-210ENST00000620412 DEFB132Q7Z7B7 95 aa30.1■■■□□ 2.41
PMPCA-210ENST00000620412 ST20-MTHFSA0A0A6YYL1 179 aa30.09■■■□□ 2.41
PMPCA-210ENST00000620412 ZC3H6P61129 1189 aaKnown RBP30.09■■■□□ 2.41
PMPCA-210ENST00000620412 CHRNA2Q15822 529 aa30.09■■■□□ 2.41
PMPCA-210ENST00000620412 CABP2Q9NPB3 220 aa30.08■■■□□ 2.41
PMPCA-210ENST00000620412 KIAA0232Q92628 1395 aa30.07■■■□□ 2.4
PMPCA-210ENST00000620412 SPATA31A5Q5VU36 1347 aa30.07■■■□□ 2.4
PMPCA-210ENST00000620412 SPATA31A7Q8IWB4 1347 aa30.07■■■□□ 2.4
PMPCA-210ENST00000620412 CRYBG1Q9Y4K1 1723 aa30.06■■■□□ 2.4
PMPCA-210ENST00000620412 COL14A1Q05707 1796 aaKnown RBP30.05■■■□□ 2.4
PMPCA-210ENST00000620412 NINLQ9Y2I6 1382 aa30.04■■■□□ 2.4
PMPCA-210ENST00000620412 NRKQ7Z2Y5 1582 aa30.04■■■□□ 2.4
PMPCA-210ENST00000620412 BRWD3Q6RI45 1802 aa30.04■■■□□ 2.4
PMPCA-210ENST00000620412 ABTB2Q8N961 1025 aa30.04■■■□□ 2.4
PMPCA-210ENST00000620412 STRN4Q9NRL3 753 aa30.04■■■□□ 2.4
PMPCA-210ENST00000620412 MON2Q7Z3U7 1717 aa30.04■■■□□ 2.4
PMPCA-210ENST00000620412 NRAPQ86VF7 1730 aa30.02■■■□□ 2.4
PMPCA-210ENST00000620412 FAM182BQ5T319 152 aa30.01■■■□□ 2.39
PMPCA-210ENST00000620412 USP6P35125 1406 aa30■■■□□ 2.39
PMPCA-210ENST00000620412 CPSF1Q10570 1443 aaKnown RBP30■■■□□ 2.39
PMPCA-210ENST00000620412 CABP1Q9NZU7 370 aa29.98■■■□□ 2.39
PMPCA-210ENST00000620412 SSH2Q76I76 1423 aa29.97■■■□□ 2.39
PMPCA-210ENST00000620412 EVA1CP58658 441 aa29.97■■■□□ 2.39
PMPCA-210ENST00000620412 SPATA31A1Q5TZJ5 1347 aa29.96■■■□□ 2.39
PMPCA-210ENST00000620412 TMF1P82094 1093 aa29.96■■■□□ 2.39
PMPCA-210ENST00000620412 CD163L1Q9NR16 1453 aa29.95■■■□□ 2.39
PMPCA-210ENST00000620412 USP35Q9P2H5 1018 aa29.95■■■□□ 2.39
PMPCA-210ENST00000620412 PHRF1Q9P1Y6 1649 aaKnown RBP29.94■■■□□ 2.38
PMPCA-210ENST00000620412 EIF4G2P78344 907 aaKnown RBP eCLIP29.94■■■□□ 2.38
PMPCA-210ENST00000620412 NLRP13Q86W25 1043 aa29.94■■■□□ 2.38
PMPCA-210ENST00000620412 ZNF692Q9BU19 519 aaPredicted RBP29.94■■■□□ 2.38
PMPCA-210ENST00000620412 USP54Q70EL1 1684 aa29.94■■■□□ 2.38
PMPCA-210ENST00000620412 CDCA8Q53HL2 280 aa29.93■■■□□ 2.38
PMPCA-210ENST00000620412 MYOM1P52179 1685 aa29.92■■■□□ 2.38
PMPCA-210ENST00000620412 BAG6P46379 1132 aa29.92■■■□□ 2.38
PMPCA-210ENST00000620412 USP19O94966 1318 aa29.92■■■□□ 2.38
PMPCA-210ENST00000620412 GCP02774 474 aa29.91■■■□□ 2.38
PMPCA-210ENST00000620412 PIK3C2AO00443 1686 aa29.9■■■□□ 2.38
PMPCA-210ENST00000620412 LARP1Q6PKG0 1096 aaKnown RBP29.89■■■□□ 2.38
PMPCA-210ENST00000620412 ZBTB7CA1YPR0 619 aa29.88■■■□□ 2.37
PMPCA-210ENST00000620412 NLRP6P59044 892 aa29.87■■■□□ 2.37
PMPCA-210ENST00000620412 EN1Q05925 392 aaPredicted RBP29.87■■■□□ 2.37
PMPCA-210ENST00000620412 CPDO75976 1380 aa29.86■■■□□ 2.37
PMPCA-210ENST00000620412 TTC21AQ8NDW8 1320 aa29.85■■■□□ 2.37
PMPCA-210ENST00000620412 KTN1Q86UP2 1357 aaKnown RBP29.84■■■□□ 2.37
PMPCA-210ENST00000620412 EDC4Q6P2E9 1401 aaKnown RBP29.84■■■□□ 2.37
PMPCA-210ENST00000620412 CAMTA1Q9Y6Y1 1673 aa29.84■■■□□ 2.37
PMPCA-210ENST00000620412 SLIT3O75094 1523 aa29.83■■■□□ 2.37
PMPCA-210ENST00000620412 HSPA5P11021 654 aaKnown RBP29.83■■■□□ 2.37
PMPCA-210ENST00000620412 THSD7AQ9UPZ6 1657 aa29.82■■■□□ 2.36
PMPCA-210ENST00000620412 A0A1W2PP64 1363 aa29.82■■■□□ 2.36
PMPCA-210ENST00000620412 ANKRD36BQ8N2N9 1353 aa29.82■■■□□ 2.36
PMPCA-210ENST00000620412 BARGINQ6ZT62 677 aa29.82■■■□□ 2.36
PMPCA-210ENST00000620412 TCP11L2Q8N4U5 519 aa29.82■■■□□ 2.36
PMPCA-210ENST00000620412 PSDA5PKW4 1024 aaPredicted RBP29.81■■■□□ 2.36
PMPCA-210ENST00000620412 FAM196AQ6ZSG2 479 aa29.81■■■□□ 2.36
PMPCA-210ENST00000620412 TERF2IPQ9NYB0 399 aa29.81■■■□□ 2.36
PMPCA-210ENST00000620412 TRIM37O94972 964 aa29.8■■■□□ 2.36
PMPCA-210ENST00000620412 PDE3BQ13370 1112 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms