RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 METP08581 1390 aa16.72■□□□□ 0.27
CLTCL1-210ENST00000617926 ARHGEF28Q8N1W1 1705 aaKnown RBP16.72■□□□□ 0.27
CLTCL1-210ENST00000617926 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
CLTCL1-210ENST00000617926 FBXO41Q8TF61 875 aa16.72■□□□□ 0.27
CLTCL1-210ENST00000617926 ADGRB2O60241 1585 aa16.71■□□□□ 0.27
CLTCL1-210ENST00000617926 BCAR3O75815 825 aa16.71■□□□□ 0.27
CLTCL1-210ENST00000617926 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-210ENST00000617926 PIK3R4Q99570 1358 aa16.7■□□□□ 0.26
CLTCL1-210ENST00000617926 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
CLTCL1-210ENST00000617926 WWC1Q8IX03 1113 aa16.69■□□□□ 0.26
CLTCL1-210ENST00000617926 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
CLTCL1-210ENST00000617926 AAMPQ13685 434 aa16.69■□□□□ 0.26
CLTCL1-210ENST00000617926 TMEM94Q12767 1356 aa16.68■□□□□ 0.26
CLTCL1-210ENST00000617926 MAPK8IP3Q9UPT6 1336 aa16.67■□□□□ 0.26
CLTCL1-210ENST00000617926 NFKBIBQ15653 356 aa16.67■□□□□ 0.26
CLTCL1-210ENST00000617926 PUS7Q96PZ0 661 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-210ENST00000617926 C14orf93Q9H972 538 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-210ENST00000617926 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
CLTCL1-210ENST00000617926 TULP4Q9NRJ4 1543 aa16.66■□□□□ 0.26
CLTCL1-210ENST00000617926 NSD2O96028 1365 aa16.66■□□□□ 0.26
CLTCL1-210ENST00000617926 RGS3P49796 1198 aa16.65■□□□□ 0.26
CLTCL1-210ENST00000617926 RUNDC1Q96C34 613 aa16.65■□□□□ 0.26
CLTCL1-210ENST00000617926 AMOTL2Q9Y2J4 779 aa16.65■□□□□ 0.26
CLTCL1-210ENST00000617926 IGHDP01880 384 aa16.65■□□□□ 0.26
CLTCL1-210ENST00000617926 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
CLTCL1-210ENST00000617926 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
CLTCL1-210ENST00000617926 WDR63Q8IWG1 891 aa16.64■□□□□ 0.25
CLTCL1-210ENST00000617926 DAXXQ9UER7 740 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-210ENST00000617926 ANKRD26Q9UPS8 1709 aa16.64■□□□□ 0.25
CLTCL1-210ENST00000617926 USP19O94966 1318 aa16.63■□□□□ 0.25
CLTCL1-210ENST00000617926 UBAP1LF5GYI3 381 aa16.63■□□□□ 0.25
CLTCL1-210ENST00000617926 MORC1Q86VD1 984 aa16.63■□□□□ 0.25
CLTCL1-210ENST00000617926 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
CLTCL1-210ENST00000617926 KNDC1Q76NI1 1749 aa16.61■□□□□ 0.25
CLTCL1-210ENST00000617926 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
CLTCL1-210ENST00000617926 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
CLTCL1-210ENST00000617926 GSE1Q14687 1217 aa16.61■□□□□ 0.25
CLTCL1-210ENST00000617926 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.61■□□□□ 0.25
CLTCL1-210ENST00000617926 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
CLTCL1-210ENST00000617926 PTCH1Q13635 1447 aa16.6■□□□□ 0.25
CLTCL1-210ENST00000617926 ROBO2Q9HCK4 1378 aa16.59■□□□□ 0.25
CLTCL1-210ENST00000617926 PANK1Q8TE04 598 aa16.59■□□□□ 0.25
CLTCL1-210ENST00000617926 TMEM132EQ6IEE7 984 aa16.59■□□□□ 0.25
CLTCL1-210ENST00000617926 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
CLTCL1-210ENST00000617926 PMFBP1Q8TBY8 1022 aa16.59■□□□□ 0.25
CLTCL1-210ENST00000617926 SLC12A5Q9H2X9 1139 aa16.59■□□□□ 0.25
CLTCL1-210ENST00000617926 COG6Q9Y2V7 657 aa16.59■□□□□ 0.25
CLTCL1-210ENST00000617926 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.24
CLTCL1-210ENST00000617926 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
CLTCL1-210ENST00000617926 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
CLTCL1-210ENST00000617926 NCOA3Q9Y6Q9 1424 aa16.57■□□□□ 0.24
CLTCL1-210ENST00000617926 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
CLTCL1-210ENST00000617926 MSH6P52701 1360 aa16.57■□□□□ 0.24
CLTCL1-210ENST00000617926 TECPR2O15040 1411 aa16.56■□□□□ 0.24
CLTCL1-210ENST00000617926 TOM1O60784 492 aa16.56■□□□□ 0.24
CLTCL1-210ENST00000617926 YTHDC2Q9H6S0 1430 aaKnown RBP16.56■□□□□ 0.24
CLTCL1-210ENST00000617926 PIP4K2BP78356 416 aa16.56■□□□□ 0.24
CLTCL1-210ENST00000617926 IL27Q8NEV9 243 aa16.55■□□□□ 0.24
CLTCL1-210ENST00000617926 EVC2Q86UK5 1308 aa16.55■□□□□ 0.24
CLTCL1-210ENST00000617926 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
CLTCL1-210ENST00000617926 MTHFSP49914 203 aa16.54■□□□□ 0.24
CLTCL1-210ENST00000617926 STK26Q9P289 416 aa16.54■□□□□ 0.24
CLTCL1-210ENST00000617926 ABCC11Q96J66 1382 aa16.54■□□□□ 0.24
CLTCL1-210ENST00000617926 ADGRL3Q9HAR2 1447 aa16.54■□□□□ 0.24
CLTCL1-210ENST00000617926 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
CLTCL1-210ENST00000617926 ROBO1Q9Y6N7 1651 aa16.53■□□□□ 0.24
CLTCL1-210ENST00000617926 RLBP1P12271 317 aa16.53■□□□□ 0.24
CLTCL1-210ENST00000617926 C14orf37Q86TY3 774 aa16.53■□□□□ 0.24
CLTCL1-210ENST00000617926 RRP7AQ9Y3A4 280 aaKnown RBP16.53■□□□□ 0.24
CLTCL1-210ENST00000617926 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.23
CLTCL1-210ENST00000617926 PCDHB15Q9Y5E8 787 aa16.52■□□□□ 0.23
CLTCL1-210ENST00000617926 BECN1Q14457 450 aa16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 DCCP43146 1447 aa16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 CDC42BPGQ6DT37 1551 aa16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 KIF20BQ96Q89 1820 aa16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 FRAT2O75474 233 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 SEC24BO95487 1268 aa16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 TNNT2P45379 298 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 WAPLQ7Z5K2 1190 aa16.5■□□□□ 0.23
CLTCL1-210ENST00000617926 DLC1Q96QB1 1528 aa16.49■□□□□ 0.23
CLTCL1-210ENST00000617926 NEUROD2Q15784 382 aa16.49■□□□□ 0.23
CLTCL1-210ENST00000617926 TNNQ9UQP3 1299 aa16.49■□□□□ 0.23
CLTCL1-210ENST00000617926 MVPQ14764 893 aaKnown RBP16.48■□□□□ 0.23
CLTCL1-210ENST00000617926 RWDD1Q9H446 243 aaPredicted RBP16.48■□□□□ 0.23
CLTCL1-210ENST00000617926 PDZRN3Q9UPQ7 1066 aa16.48■□□□□ 0.23
CLTCL1-210ENST00000617926 A0A1W2PP64 1363 aa16.47■□□□□ 0.23
CLTCL1-210ENST00000617926 TBC1D32Q96NH3 1257 aa16.47■□□□□ 0.23
CLTCL1-210ENST00000617926 MST1RQ04912 1400 aa16.47■□□□□ 0.23
CLTCL1-210ENST00000617926 FAM135BQ49AJ0 1406 aa16.47■□□□□ 0.23
CLTCL1-210ENST00000617926 SLAIN2Q9P270 581 aa16.46■□□□□ 0.23
CLTCL1-210ENST00000617926 IL16Q14005 1332 aa16.46■□□□□ 0.23
CLTCL1-210ENST00000617926 HSPA1LP34931 641 aa16.46■□□□□ 0.23
CLTCL1-210ENST00000617926 ZKSCAN2Q63HK3 967 aa16.46■□□□□ 0.23
CLTCL1-210ENST00000617926 CADPS2Q86UW7 1296 aa16.46■□□□□ 0.23
CLTCL1-210ENST00000617926 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
CLTCL1-210ENST00000617926 CD163L1Q9NR16 1453 aa16.46■□□□□ 0.22
CLTCL1-210ENST00000617926 ATAD2Q6PL18 1390 aa16.45■□□□□ 0.22
CLTCL1-210ENST00000617926 ATF3P18847 181 aa16.45■□□□□ 0.22
CLTCL1-210ENST00000617926 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms