RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 THSD7AQ9UPZ6 1657 aa14.35□□□□□ -0.11
SNX9-202ENST00000614703 ALS2Q96Q42 1657 aa14.34□□□□□ -0.11
SNX9-202ENST00000614703 EZH2Q15910 746 aaKnown RBP14.34□□□□□ -0.11
SNX9-202ENST00000614703 NBPF8Q3BBV2 869 aa14.34□□□□□ -0.11
SNX9-202ENST00000614703 NBPF14Q5TI25 921 aa14.34□□□□□ -0.11
SNX9-202ENST00000614703 TRPM3Q9HCF6 1732 aaPredicted RBP14.34□□□□□ -0.11
SNX9-202ENST00000614703 ACIN1Q9UKV3 1341 aaKnown RBP14.34□□□□□ -0.11
SNX9-202ENST00000614703 DLC1Q96QB1 1528 aa14.33□□□□□ -0.12
SNX9-202ENST00000614703 PRDM11Q9NQV5 511 aa14.33□□□□□ -0.12
SNX9-202ENST00000614703 SAFB2Q14151 953 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNX9-202ENST00000614703 FAM182BQ5T319 152 aa14.32□□□□□ -0.12
SNX9-202ENST00000614703 CAMKK2Q96RR4 588 aa14.32□□□□□ -0.12
SNX9-202ENST00000614703 APBA3O96018 575 aa14.31□□□□□ -0.12
SNX9-202ENST00000614703 TRIM37O94972 964 aa14.3□□□□□ -0.12
SNX9-202ENST00000614703 CFAP70Q5T0N1 1121 aa14.3□□□□□ -0.12
SNX9-202ENST00000614703 NGDNQ8NEJ9 315 aaKnown RBP14.3□□□□□ -0.12
SNX9-202ENST00000614703 MPHOSPH9Q99550 1183 aa14.3□□□□□ -0.12
SNX9-202ENST00000614703 PPP1R1BQ9UD71 204 aaPredicted RBP14.3□□□□□ -0.12
SNX9-202ENST00000614703 SPATA31A1Q5TZJ5 1347 aa14.3□□□□□ -0.12
SNX9-202ENST00000614703 C11orf95C9JLR9 678 aaPredicted RBP14.29□□□□□ -0.12
SNX9-202ENST00000614703 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
SNX9-202ENST00000614703 PDE3BQ13370 1112 aa14.29□□□□□ -0.12
SNX9-202ENST00000614703 RREB1Q92766 1687 aa14.28□□□□□ -0.12
SNX9-202ENST00000614703 TULP4Q9NRJ4 1543 aa14.28□□□□□ -0.12
SNX9-202ENST00000614703 CRYBG1Q9Y4K1 1723 aa14.28□□□□□ -0.12
SNX9-202ENST00000614703 SPON1Q9HCB6 807 aa14.27□□□□□ -0.13
SNX9-202ENST00000614703 ITSN1Q15811 1721 aa14.27□□□□□ -0.13
SNX9-202ENST00000614703 NINLQ9Y2I6 1382 aa14.26□□□□□ -0.13
SNX9-202ENST00000614703 EVA1CP58658 441 aa14.26□□□□□ -0.13
SNX9-202ENST00000614703 BARGINQ6ZT62 677 aa14.26□□□□□ -0.13
SNX9-202ENST00000614703 STRN4Q9NRL3 753 aa14.26□□□□□ -0.13
SNX9-202ENST00000614703 KIAA0232Q92628 1395 aa14.25□□□□□ -0.13
SNX9-202ENST00000614703 WASLO00401 505 aaPredicted RBP14.25□□□□□ -0.13
SNX9-202ENST00000614703 ATP7BP35670 1465 aa14.25□□□□□ -0.13
SNX9-202ENST00000614703 NUP188Q5SRE5 1749 aa14.24□□□□□ -0.13
SNX9-202ENST00000614703 KCNQ2O43526 872 aa14.24□□□□□ -0.13
SNX9-202ENST00000614703 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
SNX9-202ENST00000614703 MINK1Q8N4C8 1332 aaPredicted RBP14.23□□□□□ -0.13
SNX9-202ENST00000614703 TRAK1Q9UPV9 953 aa14.23□□□□□ -0.13
SNX9-202ENST00000614703 PHRF1Q9P1Y6 1649 aaKnown RBP14.23□□□□□ -0.13
SNX9-202ENST00000614703 PRR36Q9H6K5 1346 aa14.22□□□□□ -0.13
SNX9-202ENST00000614703 USP35Q9P2H5 1018 aa14.22□□□□□ -0.13
SNX9-202ENST00000614703 THRAP3Q9Y2W1 955 aaKnown RBP14.22□□□□□ -0.13
SNX9-202ENST00000614703 CHRNA2Q15822 529 aa14.21□□□□□ -0.13
SNX9-202ENST00000614703 TCP11L2Q8N4U5 519 aa14.21□□□□□ -0.13
SNX9-202ENST00000614703 STAC3Q96MF2 364 aa14.21□□□□□ -0.13
SNX9-202ENST00000614703 SSH2Q76I76 1423 aa14.21□□□□□ -0.13
SNX9-202ENST00000614703 ADGRB1O14514 1584 aa14.21□□□□□ -0.14
SNX9-202ENST00000614703 ZC3H6P61129 1189 aaKnown RBP14.2□□□□□ -0.14
SNX9-202ENST00000614703 RGPD3A6NKT7 1758 aaPredicted RBP14.19□□□□□ -0.14
SNX9-202ENST00000614703 RGPD4Q7Z3J3 1758 aa14.19□□□□□ -0.14
SNX9-202ENST00000614703 NUDT16Q96DE0 195 aaKnown RBP14.18□□□□□ -0.14
SNX9-202ENST00000614703 PARP4Q9UKK3 1724 aaKnown RBP14.17□□□□□ -0.14
SNX9-202ENST00000614703 CPDO75976 1380 aa14.17□□□□□ -0.14
SNX9-202ENST00000614703 PLSCR1O15162 318 aa14.16□□□□□ -0.14
SNX9-202ENST00000614703 OVOS2A0A0G2JMS6 1433 aa14.15□□□□□ -0.14
SNX9-202ENST00000614703 OVOS2A0A0J9YW53 1432 aa14.15□□□□□ -0.14
SNX9-202ENST00000614703 OVOS2Q6IE36 1432 aa14.15□□□□□ -0.14
SNX9-202ENST00000614703 LARP1Q6PKG0 1096 aaKnown RBP14.15□□□□□ -0.14
SNX9-202ENST00000614703 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
SNX9-202ENST00000614703 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
SNX9-202ENST00000614703 ABTB2Q8N961 1025 aa14.14□□□□□ -0.15
SNX9-202ENST00000614703 CCDC61Q9Y6R9 512 aa14.14□□□□□ -0.15
SNX9-202ENST00000614703 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
SNX9-202ENST00000614703 NUTM2GQ5VZR2 741 aa14.13□□□□□ -0.15
SNX9-202ENST00000614703 NLRP13Q86W25 1043 aa14.13□□□□□ -0.15
SNX9-202ENST00000614703 LMO7Q8WWI1 1683 aa14.13□□□□□ -0.15
SNX9-202ENST00000614703 ACEP12821 1306 aa14.13□□□□□ -0.15
SNX9-202ENST00000614703 ARHGEF28Q8N1W1 1705 aaKnown RBP14.12□□□□□ -0.15
SNX9-202ENST00000614703 CRB1P82279 1406 aa14.12□□□□□ -0.15
SNX9-202ENST00000614703 UTRNP46939 3433 aa14.12□□□□□ -0.15
SNX9-202ENST00000614703 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
SNX9-202ENST00000614703 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
SNX9-202ENST00000614703 PLEKHG3A1L390 1219 aa14.11□□□□□ -0.15
SNX9-202ENST00000614703 DCAF11Q8TEB1 546 aa14.11□□□□□ -0.15
SNX9-202ENST00000614703 CDK19Q9BWU1 502 aa14.11□□□□□ -0.15
SNX9-202ENST00000614703 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
SNX9-202ENST00000614703 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
SNX9-202ENST00000614703 USP19O94966 1318 aa14.11□□□□□ -0.15
SNX9-202ENST00000614703 TOPAZ1Q8N9V7 1692 aa14.1□□□□□ -0.15
SNX9-202ENST00000614703 CHD4Q14839 1912 aa14.1□□□□□ -0.15
SNX9-202ENST00000614703 CASZ1Q86V15 1759 aa14.1□□□□□ -0.15
SNX9-202ENST00000614703 GCP02774 474 aa14.1□□□□□ -0.15
SNX9-202ENST00000614703 DDB1Q16531 1140 aa14.1□□□□□ -0.15
SNX9-202ENST00000614703 COL5A2P05997 1499 aaPredicted RBP14.1□□□□□ -0.15
SNX9-202ENST00000614703 ZNF784Q8NCA9 323 aaPredicted RBP14.09□□□□□ -0.15
SNX9-202ENST00000614703 CDCA7Q9BWT1 371 aaPredicted RBP14.09□□□□□ -0.15
SNX9-202ENST00000614703 PEAK1Q9H792 1746 aa14.09□□□□□ -0.15
SNX9-202ENST00000614703 STK32BQ9NY57 414 aa14.07□□□□□ -0.16
SNX9-202ENST00000614703 LRRC37A3O60309 1634 aa14.06□□□□□ -0.16
SNX9-202ENST00000614703 ZBTB7AO95365 584 aa14.06□□□□□ -0.16
SNX9-202ENST00000614703 TOM1L2Q6ZVM7 507 aa14.06□□□□□ -0.16
SNX9-202ENST00000614703 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
SNX9-202ENST00000614703 AATKQ6ZMQ8 1374 aa14.06□□□□□ -0.16
SNX9-202ENST00000614703 AKAP12Q02952 1782 aa14.06□□□□□ -0.16
SNX9-202ENST00000614703 BCL9O00512 1426 aa14.06□□□□□ -0.16
SNX9-202ENST00000614703 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
SNX9-202ENST00000614703 MYOM1P52179 1685 aa14.04□□□□□ -0.16
SNX9-202ENST00000614703 PTGER2P43116 358 aa14.04□□□□□ -0.16
SNX9-202ENST00000614703 SYT17Q9BSW7 474 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms