RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ITSN1Q15811 1721 aa25.55■■□□□ 1.68
CSNK1E-215ENST00000612795 FAM182BQ5T319 152 aa25.55■■□□□ 1.68
CSNK1E-215ENST00000612795 TULP4Q9NRJ4 1543 aa25.54■■□□□ 1.68
CSNK1E-215ENST00000612795 DISP2A7MBM2 1401 aa25.54■■□□□ 1.68
CSNK1E-215ENST00000612795 R3HDM1Q15032 1099 aaKnown RBP25.53■■□□□ 1.68
CSNK1E-215ENST00000612795 SPATA31A5Q5VU36 1347 aa25.53■■□□□ 1.68
CSNK1E-215ENST00000612795 SPATA31A7Q8IWB4 1347 aa25.53■■□□□ 1.68
CSNK1E-215ENST00000612795 HIRIP3Q9BW71 556 aaPredicted RBP25.52■■□□□ 1.68
CSNK1E-215ENST00000612795 ACIN1Q9UKV3 1341 aaKnown RBP25.52■■□□□ 1.68
CSNK1E-215ENST00000612795 ADGRB1O14514 1584 aa25.52■■□□□ 1.68
CSNK1E-215ENST00000612795 PHRF1Q9P1Y6 1649 aaKnown RBP25.51■■□□□ 1.67
CSNK1E-215ENST00000612795 PRDM11Q9NQV5 511 aa25.5■■□□□ 1.67
CSNK1E-215ENST00000612795 MINK1Q8N4C8 1332 aaPredicted RBP25.49■■□□□ 1.67
CSNK1E-215ENST00000612795 PRR36Q9H6K5 1346 aa25.48■■□□□ 1.67
CSNK1E-215ENST00000612795 PAK3O75914 559 aaPredicted RBP25.48■■□□□ 1.67
CSNK1E-215ENST00000612795 TRAK1Q9UPV9 953 aa25.48■■□□□ 1.67
CSNK1E-215ENST00000612795 NGDNQ8NEJ9 315 aaKnown RBP25.47■■□□□ 1.67
CSNK1E-215ENST00000612795 EZH2Q15910 746 aaKnown RBP25.46■■□□□ 1.67
CSNK1E-215ENST00000612795 RREB1Q92766 1687 aa25.45■■□□□ 1.67
CSNK1E-215ENST00000612795 ARHGEF28Q8N1W1 1705 aaKnown RBP25.43■■□□□ 1.66
CSNK1E-215ENST00000612795 NUP188Q5SRE5 1749 aa25.43■■□□□ 1.66
CSNK1E-215ENST00000612795 SPATA31A1Q5TZJ5 1347 aa25.42■■□□□ 1.66
CSNK1E-215ENST00000612795 WASLO00401 505 aaPredicted RBP25.42■■□□□ 1.66
CSNK1E-215ENST00000612795 TRIM37O94972 964 aa25.42■■□□□ 1.66
CSNK1E-215ENST00000612795 KIAA0232Q92628 1395 aa25.42■■□□□ 1.66
CSNK1E-215ENST00000612795 FAM196AQ6ZSG2 479 aa25.41■■□□□ 1.66
CSNK1E-215ENST00000612795 STRN4Q9NRL3 753 aa25.41■■□□□ 1.66
CSNK1E-215ENST00000612795 PARD3Q8TEW0 1356 aa25.4■■□□□ 1.66
CSNK1E-215ENST00000612795 ATP7BP35670 1465 aa25.4■■□□□ 1.66
CSNK1E-215ENST00000612795 CHRNA2Q15822 529 aa25.38■■□□□ 1.65
CSNK1E-215ENST00000612795 CAMKK2Q96RR4 588 aa25.38■■□□□ 1.65
CSNK1E-215ENST00000612795 APBA3O96018 575 aa25.37■■□□□ 1.65
CSNK1E-215ENST00000612795 USP35Q9P2H5 1018 aa25.36■■□□□ 1.65
CSNK1E-215ENST00000612795 TOPAZ1Q8N9V7 1692 aa25.36■■□□□ 1.65
CSNK1E-215ENST00000612795 NRKQ7Z2Y5 1582 aa25.35■■□□□ 1.65
CSNK1E-215ENST00000612795 ZC3H6P61129 1189 aaKnown RBP25.33■■□□□ 1.65
CSNK1E-215ENST00000612795 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.65
CSNK1E-215ENST00000612795 SSH2Q76I76 1423 aa25.32■■□□□ 1.64
CSNK1E-215ENST00000612795 PDE3BQ13370 1112 aa25.32■■□□□ 1.64
CSNK1E-215ENST00000612795 EVA1CP58658 441 aa25.31■■□□□ 1.64
CSNK1E-215ENST00000612795 NUTM2GQ5VZR2 741 aa25.31■■□□□ 1.64
CSNK1E-215ENST00000612795 NUDT16Q96DE0 195 aaKnown RBP25.31■■□□□ 1.64
CSNK1E-215ENST00000612795 DCAF11Q8TEB1 546 aa25.3■■□□□ 1.64
CSNK1E-215ENST00000612795 LMO7Q8WWI1 1683 aa25.29■■□□□ 1.64
CSNK1E-215ENST00000612795 PARP4Q9UKK3 1724 aaKnown RBP25.29■■□□□ 1.64
CSNK1E-215ENST00000612795 NBPF8Q3BBV2 869 aa25.29■■□□□ 1.64
CSNK1E-215ENST00000612795 NBPF14Q5TI25 921 aa25.29■■□□□ 1.64
CSNK1E-215ENST00000612795 BARGINQ6ZT62 677 aa25.28■■□□□ 1.64
CSNK1E-215ENST00000612795 CAMTA1Q9Y6Y1 1673 aa25.27■■□□□ 1.64
CSNK1E-215ENST00000612795 YY1P25490 414 aa25.27■■□□□ 1.64
CSNK1E-215ENST00000612795 RAB3GAP2Q9H2M9 1393 aa25.26■■□□□ 1.63
CSNK1E-215ENST00000612795 POLR3AO14802 1390 aaPredicted RBP25.24■■□□□ 1.63
CSNK1E-215ENST00000612795 PPP1R1BQ9UD71 204 aaPredicted RBP25.24■■□□□ 1.63
CSNK1E-215ENST00000612795 RGPD3A6NKT7 1758 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-215ENST00000612795 RGPD4Q7Z3J3 1758 aa25.23■■□□□ 1.63
CSNK1E-215ENST00000612795 LARP1Q6PKG0 1096 aaKnown RBP25.23■■□□□ 1.63
CSNK1E-215ENST00000612795 TCP11L2Q8N4U5 519 aa25.23■■□□□ 1.63
CSNK1E-215ENST00000612795 ACEP12821 1306 aa25.22■■□□□ 1.63
CSNK1E-215ENST00000612795 SBF2Q86WG5 1849 aa25.22■■□□□ 1.63
CSNK1E-215ENST00000612795 STAC3Q96MF2 364 aa25.22■■□□□ 1.63
CSNK1E-215ENST00000612795 CDK19Q9BWU1 502 aa25.22■■□□□ 1.63
CSNK1E-215ENST00000612795 CPDO75976 1380 aa25.2■■□□□ 1.63
CSNK1E-215ENST00000612795 ABTB2Q8N961 1025 aa25.2■■□□□ 1.62
CSNK1E-215ENST00000612795 SPON1Q9HCB6 807 aa25.2■■□□□ 1.62
CSNK1E-215ENST00000612795 DCAF8L1A6NGE4 600 aa25.19■■□□□ 1.62
CSNK1E-215ENST00000612795 KIAA1210Q9ULL0 1709 aa25.18■■□□□ 1.62
CSNK1E-215ENST00000612795 COL5A2P05997 1499 aaPredicted RBP25.18■■□□□ 1.62
CSNK1E-215ENST00000612795 THRAP3Q9Y2W1 955 aaKnown RBP25.18■■□□□ 1.62
CSNK1E-215ENST00000612795 CCDC61Q9Y6R9 512 aa25.18■■□□□ 1.62
CSNK1E-215ENST00000612795 LRRC37A3O60309 1634 aa25.18■■□□□ 1.62
CSNK1E-215ENST00000612795 PEAK1Q9H792 1746 aa25.17■■□□□ 1.62
CSNK1E-215ENST00000612795 WNK3Q9BYP7 1800 aa25.17■■□□□ 1.62
CSNK1E-215ENST00000612795 NINLQ9Y2I6 1382 aa25.17■■□□□ 1.62
CSNK1E-215ENST00000612795 USP19O94966 1318 aa25.16■■□□□ 1.62
CSNK1E-215ENST00000612795 OVOS2A0A0G2JMS6 1433 aa25.16■■□□□ 1.62
CSNK1E-215ENST00000612795 OVOS2A0A0J9YW53 1432 aa25.16■■□□□ 1.62
CSNK1E-215ENST00000612795 OVOS2Q6IE36 1432 aa25.16■■□□□ 1.62
CSNK1E-215ENST00000612795 C11orf95C9JLR9 678 aaPredicted RBP25.15■■□□□ 1.62
CSNK1E-215ENST00000612795 KCNQ2O43526 872 aa25.15■■□□□ 1.62
CSNK1E-215ENST00000612795 AKAP12Q02952 1782 aa25.15■■□□□ 1.62
CSNK1E-215ENST00000612795 CASZ1Q86V15 1759 aa25.13■■□□□ 1.61
CSNK1E-215ENST00000612795 CRB1P82279 1406 aa25.13■■□□□ 1.61
CSNK1E-215ENST00000612795 PLEKHG3A1L390 1219 aa25.13■■□□□ 1.61
CSNK1E-215ENST00000612795 NLRP13Q86W25 1043 aa25.13■■□□□ 1.61
CSNK1E-215ENST00000612795 PPIP5K1Q6PFW1 1433 aa25.12■■□□□ 1.61
CSNK1E-215ENST00000612795 ZBTB7CA1YPR0 619 aa25.11■■□□□ 1.61
CSNK1E-215ENST00000612795 GCP02774 474 aa25.1■■□□□ 1.61
CSNK1E-215ENST00000612795 QRICH2Q9H0J4 1663 aa25.09■■□□□ 1.61
CSNK1E-215ENST00000612795 SRPK2P78362 688 aaKnown RBP25.08■■□□□ 1.61
CSNK1E-215ENST00000612795 MYOM1P52179 1685 aa25.06■■□□□ 1.6
CSNK1E-215ENST00000612795 SLIT3O75094 1523 aa25.06■■□□□ 1.6
CSNK1E-215ENST00000612795 DDB1Q16531 1140 aa25.05■■□□□ 1.6
CSNK1E-215ENST00000612795 BRD4O60885 1362 aaPredicted RBP25.05■■□□□ 1.6
CSNK1E-215ENST00000612795 RGPD5Q99666 1765 aa25.04■■□□□ 1.6
CSNK1E-215ENST00000612795 COL18A1P39060 1754 aa25.03■■□□□ 1.6
CSNK1E-215ENST00000612795 PLSCR1O15162 318 aa25.03■■□□□ 1.6
CSNK1E-215ENST00000612795 PIK3C2AO00443 1686 aa25.03■■□□□ 1.6
CSNK1E-215ENST00000612795 TOM1L2Q6ZVM7 507 aa25.02■■□□□ 1.6
CSNK1E-215ENST00000612795 ANO8Q9HCE9 1232 aaPredicted RBP25.02■■□□□ 1.6
CSNK1E-215ENST00000612795 AATKQ6ZMQ8 1374 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms