RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 TMF1P82094 1093 aa20.04■□□□□ 0.8
HDDC2-206ENST00000608461 CDCA8Q53HL2 280 aa20.04■□□□□ 0.8
HDDC2-206ENST00000608461 FNBP4Q8N3X1 1017 aaPredicted RBP20.04■□□□□ 0.8
HDDC2-206ENST00000608461 NINLQ9Y2I6 1382 aa20.04■□□□□ 0.8
HDDC2-206ENST00000608461 AFF2P51816 1311 aa20.03■□□□□ 0.8
HDDC2-206ENST00000608461 USP6P35125 1406 aa20.03■□□□□ 0.8
HDDC2-206ENST00000608461 HAP1P54257 671 aaPredicted RBP20.03■□□□□ 0.8
HDDC2-206ENST00000608461 ILDR2Q71H61 639 aa20.03■□□□□ 0.8
HDDC2-206ENST00000608461 CPSF1Q10570 1443 aaKnown RBP20.02■□□□□ 0.8
HDDC2-206ENST00000608461 AKAP12Q02952 1782 aa20.01■□□□□ 0.79
HDDC2-206ENST00000608461 POTEAQ6S8J7 498 aa20.01■□□□□ 0.79
HDDC2-206ENST00000608461 ABCA3Q99758 1704 aa20.01■□□□□ 0.79
HDDC2-206ENST00000608461 ABTB2Q8N961 1025 aa20■□□□□ 0.79
HDDC2-206ENST00000608461 SSH2Q76I76 1423 aa20■□□□□ 0.79
HDDC2-206ENST00000608461 EIF4G2P78344 907 aaKnown RBP eCLIP19.99■□□□□ 0.792e-6■■■□□ 14.8
HDDC2-206ENST00000608461 NLRP13Q86W25 1043 aa19.99■□□□□ 0.79
HDDC2-206ENST00000608461 CABLES1Q8TDN4 633 aa19.99■□□□□ 0.79
HDDC2-206ENST00000608461 TERF2IPQ9NYB0 399 aa19.99■□□□□ 0.79
HDDC2-206ENST00000608461 USP21Q9UK80 565 aa19.98■□□□□ 0.79
HDDC2-206ENST00000608461 CRYBG1Q9Y4K1 1723 aa19.98■□□□□ 0.79
HDDC2-206ENST00000608461 TTC21AQ8NDW8 1320 aa19.98■□□□□ 0.79
HDDC2-206ENST00000608461 KTN1Q86UP2 1357 aaKnown RBP19.97■□□□□ 0.79
HDDC2-206ENST00000608461 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
HDDC2-206ENST00000608461 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
HDDC2-206ENST00000608461 SLIT2O94813 1529 aa19.96■□□□□ 0.79
HDDC2-206ENST00000608461 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
HDDC2-206ENST00000608461 SLC12A5Q9H2X9 1139 aa19.95■□□□□ 0.78
HDDC2-206ENST00000608461 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
HDDC2-206ENST00000608461 TRPC5Q9UL62 973 aaPredicted RBP19.95■□□□□ 0.78
HDDC2-206ENST00000608461 USP19O94966 1318 aa19.95■□□□□ 0.78
HDDC2-206ENST00000608461 TTC21BQ7Z4L5 1316 aa19.95■□□□□ 0.78
HDDC2-206ENST00000608461 BCL9LQ86UU0 1499 aa19.94■□□□□ 0.78
HDDC2-206ENST00000608461 CD163L1Q9NR16 1453 aa19.94■□□□□ 0.78
HDDC2-206ENST00000608461 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.94■□□□□ 0.78
HDDC2-206ENST00000608461 NWD2Q9ULI1 1742 aa19.94■□□□□ 0.78
HDDC2-206ENST00000608461 RXRBP28702 533 aa19.94■□□□□ 0.78
HDDC2-206ENST00000608461 NRKQ7Z2Y5 1582 aa19.93■□□□□ 0.78
HDDC2-206ENST00000608461 RBM6P78332 1123 aaKnown RBP19.93■□□□□ 0.78
HDDC2-206ENST00000608461 PHRF1Q9P1Y6 1649 aaKnown RBP19.93■□□□□ 0.78
HDDC2-206ENST00000608461 CDK12Q9NYV4 1490 aaPredicted RBP19.92■□□□□ 0.78
HDDC2-206ENST00000608461 NLRP6P59044 892 aa19.92■□□□□ 0.78
HDDC2-206ENST00000608461 UNC5CLQ8IV45 518 aa19.92■□□□□ 0.78
HDDC2-206ENST00000608461 COL14A1Q05707 1796 aaKnown RBP19.92■□□□□ 0.78
HDDC2-206ENST00000608461 EDC4Q6P2E9 1401 aaKnown RBP19.92■□□□□ 0.78
HDDC2-206ENST00000608461 FAM83GA6ND36 823 aa19.91■□□□□ 0.78
HDDC2-206ENST00000608461 ATRNO75882 1429 aa19.91■□□□□ 0.78
HDDC2-206ENST00000608461 SOCS7O14512 581 aa19.9■□□□□ 0.78
HDDC2-206ENST00000608461 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
HDDC2-206ENST00000608461 NUTM2GQ5VZR2 741 aa19.9■□□□□ 0.78
HDDC2-206ENST00000608461 CPDO75976 1380 aa19.9■□□□□ 0.78
HDDC2-206ENST00000608461 PIK3C2AO00443 1686 aa19.9■□□□□ 0.78
HDDC2-206ENST00000608461 A0A1W2PP64 1363 aa19.89■□□□□ 0.77
HDDC2-206ENST00000608461 GCP02774 474 aa19.89■□□□□ 0.77
HDDC2-206ENST00000608461 HSPA5P11021 654 aaKnown RBP19.89■□□□□ 0.77
HDDC2-206ENST00000608461 PLCH1Q4KWH8 1693 aa19.89■□□□□ 0.77
HDDC2-206ENST00000608461 ANKRD36BQ8N2N9 1353 aa19.89■□□□□ 0.77
HDDC2-206ENST00000608461 PRDM11Q9NQV5 511 aa19.89■□□□□ 0.77
HDDC2-206ENST00000608461 SLIT3O75094 1523 aa19.88■□□□□ 0.77
HDDC2-206ENST00000608461 USP31Q70CQ4 1352 aa19.88■□□□□ 0.77
HDDC2-206ENST00000608461 KCNH5Q8NCM2 988 aa19.88■□□□□ 0.77
HDDC2-206ENST00000608461 KIAA0232Q92628 1395 aa19.86■□□□□ 0.77
HDDC2-206ENST00000608461 GJD4Q96KN9 370 aaPredicted RBP19.86■□□□□ 0.77
HDDC2-206ENST00000608461 USP54Q70EL1 1684 aa19.86■□□□□ 0.77
HDDC2-206ENST00000608461 VPS72Q15906 364 aa19.85■□□□□ 0.77
HDDC2-206ENST00000608461 BTG4Q9NY30 223 aa19.85■□□□□ 0.77
HDDC2-206ENST00000608461 ZC3H6P61129 1189 aaKnown RBP19.84■□□□□ 0.77
HDDC2-206ENST00000608461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.84■□□□□ 0.77
HDDC2-206ENST00000608461 NRAPQ86VF7 1730 aa19.82■□□□□ 0.76
HDDC2-206ENST00000608461 MYOM1P52179 1685 aa19.81■□□□□ 0.76
HDDC2-206ENST00000608461 AATKQ6ZMQ8 1374 aa19.8■□□□□ 0.76
HDDC2-206ENST00000608461 LMO7Q8WWI1 1683 aa19.79■□□□□ 0.76
HDDC2-206ENST00000608461 NME9Q86XW9 330 aa19.79■□□□□ 0.76
HDDC2-206ENST00000608461 ONECUT3O60422 494 aaPredicted RBP19.78■□□□□ 0.76
HDDC2-206ENST00000608461 CHRNA2Q15822 529 aa19.78■□□□□ 0.76
HDDC2-206ENST00000608461 ARHGEF25Q86VW2 580 aa19.78■□□□□ 0.76
HDDC2-206ENST00000608461 OVOS2A0A0J9YW53 1432 aa19.77■□□□□ 0.76
HDDC2-206ENST00000608461 OVOS2Q6IE36 1432 aa19.77■□□□□ 0.76
HDDC2-206ENST00000608461 ABCC6O95255 1503 aa19.77■□□□□ 0.76
HDDC2-206ENST00000608461 GLI3P10071 1580 aa19.77■□□□□ 0.76
HDDC2-206ENST00000608461 RGS12O14924 1447 aa19.76■□□□□ 0.75
HDDC2-206ENST00000608461 NFAT5O94916 1531 aa19.76■□□□□ 0.75
HDDC2-206ENST00000608461 EVA1CP58658 441 aa19.76■□□□□ 0.75
HDDC2-206ENST00000608461 COG3Q96JB2 828 aa19.76■□□□□ 0.75
HDDC2-206ENST00000608461 CCDC9Q9Y3X0 531 aaKnown RBP19.76■□□□□ 0.75
HDDC2-206ENST00000608461 CAMTA1Q9Y6Y1 1673 aa19.75■□□□□ 0.75
HDDC2-206ENST00000608461 SPATA31A5Q5VU36 1347 aa19.75■□□□□ 0.75
HDDC2-206ENST00000608461 SPATA31A7Q8IWB4 1347 aa19.75■□□□□ 0.75
HDDC2-206ENST00000608461 FYB1O15117 783 aa19.74■□□□□ 0.75
HDDC2-206ENST00000608461 ZRANB1Q9UGI0 708 aa19.74■□□□□ 0.75
HDDC2-206ENST00000608461 COL18A1P39060 1754 aa19.73■□□□□ 0.75
HDDC2-206ENST00000608461 CARD14Q9BXL6 1004 aa19.72■□□□□ 0.75
HDDC2-206ENST00000608461 COL5A2P05997 1499 aaPredicted RBP19.72■□□□□ 0.75
HDDC2-206ENST00000608461 SPATA31A1Q5TZJ5 1347 aa19.72■□□□□ 0.75
HDDC2-206ENST00000608461 POLR3GLQ9BT43 218 aa19.71■□□□□ 0.75
HDDC2-206ENST00000608461 STRN4Q9NRL3 753 aa19.71■□□□□ 0.75
HDDC2-206ENST00000608461 THRAP3Q9Y2W1 955 aaKnown RBP19.71■□□□□ 0.75
HDDC2-206ENST00000608461 NSD3Q9BZ95 1437 aa19.7■□□□□ 0.74
HDDC2-206ENST00000608461 KIF20BQ96Q89 1820 aa19.7■□□□□ 0.74
HDDC2-206ENST00000608461 C11orf95C9JLR9 678 aaPredicted RBP19.7■□□□□ 0.74
HDDC2-206ENST00000608461 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms