RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 ZNF511Q8NB15 262 aa12.49□□□□□ -0.41
LINC00458-206ENST00000607494 PER1O15534 1290 aaPredicted RBP12.48□□□□□ -0.41
LINC00458-206ENST00000607494 SNRPBP14678 240 aaKnown RBP12.48□□□□□ -0.41
LINC00458-206ENST00000607494 TSC1Q92574 1164 aa12.47□□□□□ -0.41
LINC00458-206ENST00000607494 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
LINC00458-206ENST00000607494 WASF2Q9Y6W5 498 aa12.45□□□□□ -0.42
LINC00458-206ENST00000607494 BMP1P13497 986 aa12.44□□□□□ -0.42
LINC00458-206ENST00000607494 PRPF38BQ5VTL8 546 aaKnown RBP12.44□□□□□ -0.42
LINC00458-206ENST00000607494 LCE2AQ5TA79 106 aaPredicted RBP12.43□□□□□ -0.42
LINC00458-206ENST00000607494 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
LINC00458-206ENST00000607494 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
LINC00458-206ENST00000607494 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
LINC00458-206ENST00000607494 TREML4Q6UXN2 200 aa12.42□□□□□ -0.42
LINC00458-206ENST00000607494 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
LINC00458-206ENST00000607494 FOXJ1Q92949 421 aa12.42□□□□□ -0.42
LINC00458-206ENST00000607494 TRIM47Q96LD4 638 aa12.41□□□□□ -0.42
LINC00458-206ENST00000607494 LILRB3O75022 631 aa12.4□□□□□ -0.42
LINC00458-206ENST00000607494 RTL5Q5HYW3 569 aaPredicted RBP12.4□□□□□ -0.42
LINC00458-206ENST00000607494 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
LINC00458-206ENST00000607494 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
LINC00458-206ENST00000607494 TRIM46Q7Z4K8 759 aa12.39□□□□□ -0.43
LINC00458-206ENST00000607494 CAPN5O15484 640 aaPredicted RBP12.38□□□□□ -0.43
LINC00458-206ENST00000607494 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
LINC00458-206ENST00000607494 C4orf48Q5BLP8 95 aa12.38□□□□□ -0.43
LINC00458-206ENST00000607494 GPBP1L1Q9HC44 474 aaPredicted RBP12.38□□□□□ -0.43
LINC00458-206ENST00000607494 NFX1Q12986 1120 aaKnown RBP12.36□□□□□ -0.43
LINC00458-206ENST00000607494 NNTQ13423 1086 aa12.36□□□□□ -0.43
LINC00458-206ENST00000607494 LCE2CQ5TA81 110 aa12.36□□□□□ -0.43
LINC00458-206ENST00000607494 SENP2Q9HC62 589 aa12.36□□□□□ -0.43
LINC00458-206ENST00000607494 TUSC1Q2TAM9 212 aa12.35□□□□□ -0.43
LINC00458-206ENST00000607494 WFS1O76024 890 aa12.34□□□□□ -0.43
LINC00458-206ENST00000607494 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
LINC00458-206ENST00000607494 ARID5BQ14865 1188 aa12.32□□□□□ -0.44
LINC00458-206ENST00000607494 AGERQ15109 404 aa12.32□□□□□ -0.44
LINC00458-206ENST00000607494 FAM174AQ8TBP5 190 aa12.32□□□□□ -0.44
LINC00458-206ENST00000607494 BCANQ96GW7 911 aa12.32□□□□□ -0.44
LINC00458-206ENST00000607494 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
LINC00458-206ENST00000607494 KIFC2Q96AC6 838 aa12.31□□□□□ -0.44
LINC00458-206ENST00000607494 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
LINC00458-206ENST00000607494 TIMP2P16035 220 aa12.3□□□□□ -0.44
LINC00458-206ENST00000607494 ADH1CP00326 375 aa12.29□□□□□ -0.44
LINC00458-206ENST00000607494 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
LINC00458-206ENST00000607494 MPNDQ8N594 471 aa12.29□□□□□ -0.44
LINC00458-206ENST00000607494 KDM4CQ9H3R0 1056 aa12.29□□□□□ -0.44
LINC00458-206ENST00000607494 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
LINC00458-206ENST00000607494 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
LINC00458-206ENST00000607494 TERTO14746 1132 aaKnown RBP12.27□□□□□ -0.45
LINC00458-206ENST00000607494 NR3C2P08235 984 aa12.27□□□□□ -0.45
LINC00458-206ENST00000607494 CTDSPL2Q05D32 466 aa12.27□□□□□ -0.45
LINC00458-206ENST00000607494 ZFP42Q96MM3 310 aa12.27□□□□□ -0.45
LINC00458-206ENST00000607494 PROCA1Q8NCQ7 364 aaPredicted RBP12.26□□□□□ -0.45
LINC00458-206ENST00000607494 CDK15Q96Q40 435 aa12.26□□□□□ -0.45
LINC00458-206ENST00000607494 KLF16Q9BXK1 252 aaPredicted RBP12.26□□□□□ -0.45
LINC00458-206ENST00000607494 ZFAND3Q9H8U3 227 aa12.26□□□□□ -0.45
LINC00458-206ENST00000607494 BPHLQ86WA6 291 aaPredicted RBP12.25□□□□□ -0.45
LINC00458-206ENST00000607494 SH3RF1Q7Z6J0 888 aa12.24□□□□□ -0.45
LINC00458-206ENST00000607494 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
LINC00458-206ENST00000607494 MAGEB6P1A0A0J9YX57 407 aa12.23□□□□□ -0.45
LINC00458-206ENST00000607494 GRM5P41594 1212 aa12.23□□□□□ -0.45
LINC00458-206ENST00000607494 SH3BP5LQ7L8J4 393 aa12.23□□□□□ -0.45
LINC00458-206ENST00000607494 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
LINC00458-206ENST00000607494 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
LINC00458-206ENST00000607494 SOBPA7XYQ1 873 aa12.22□□□□□ -0.45
LINC00458-206ENST00000607494 VEGFBP49765 207 aa12.22□□□□□ -0.45
LINC00458-206ENST00000607494 MRPL14Q6P1L8 145 aaKnown RBP12.22□□□□□ -0.45
LINC00458-206ENST00000607494 C1QTNF2Q9BXJ5 285 aa12.22□□□□□ -0.45
LINC00458-206ENST00000607494 CARD14Q9BXL6 1004 aa12.22□□□□□ -0.45
LINC00458-206ENST00000607494 ZIC2O95409 532 aaPredicted RBP12.21□□□□□ -0.45
LINC00458-206ENST00000607494 SH3D19Q5HYK7 790 aa12.21□□□□□ -0.45
LINC00458-206ENST00000607494 NBPF14Q5TI25 921 aa12.21□□□□□ -0.45
LINC00458-206ENST00000607494 FSHRP23945 695 aa12.2□□□□□ -0.46
LINC00458-206ENST00000607494 SKIV2LQ15477 1246 aaKnown RBP12.2□□□□□ -0.46
LINC00458-206ENST00000607494 ARMC2Q8NEN0 867 aa12.19□□□□□ -0.46
LINC00458-206ENST00000607494 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00458-206ENST00000607494 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
LINC00458-206ENST00000607494 NR5A1Q13285 461 aa12.17□□□□□ -0.46
LINC00458-206ENST00000607494 NR6A1Q15406 480 aa12.17□□□□□ -0.46
LINC00458-206ENST00000607494 NXF1Q9UBU9 619 aaKnown RBP12.17□□□□□ -0.46
LINC00458-206ENST00000607494 WIPF1O43516 503 aa12.16□□□□□ -0.46
LINC00458-206ENST00000607494 C6orf118Q5T5N4 469 aa12.16□□□□□ -0.46
LINC00458-206ENST00000607494 VASH1Q7L8A9 365 aaPredicted RBP12.16□□□□□ -0.46
LINC00458-206ENST00000607494 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
LINC00458-206ENST00000607494 SCARF1Q14162 830 aa12.15□□□□□ -0.46
LINC00458-206ENST00000607494 ERFEQ4G0M1 354 aa12.15□□□□□ -0.46
LINC00458-206ENST00000607494 AP1G2O75843 785 aa12.13□□□□□ -0.47
LINC00458-206ENST00000607494 PPP2R2DQ66LE6 453 aa12.13□□□□□ -0.47
LINC00458-206ENST00000607494 TRMT44Q8IYL2 757 aaKnown RBP12.13□□□□□ -0.47
LINC00458-206ENST00000607494 EPS8L1Q8TE68 723 aa12.13□□□□□ -0.47
LINC00458-206ENST00000607494 HMX1Q9NP08 348 aaPredicted RBP12.12□□□□□ -0.47
LINC00458-206ENST00000607494 FKBPLQ9UIM3 349 aa12.12□□□□□ -0.47
LINC00458-206ENST00000607494 MAP4K5Q9Y4K4 846 aa12.12□□□□□ -0.47
LINC00458-206ENST00000607494 MEIOBQ8N635 442 aa12.11□□□□□ -0.47
LINC00458-206ENST00000607494 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
LINC00458-206ENST00000607494 GPKOWQ92917 476 aaPredicted RBP eCLIP12.1□□□□□ -0.47
LINC00458-206ENST00000607494 OCSTAMPQ9BR26 566 aa12.1□□□□□ -0.47
LINC00458-206ENST00000607494 ARHGAP9Q9BRR9 750 aa12.1□□□□□ -0.47
LINC00458-206ENST00000607494 GMPRP36959 345 aa12.09□□□□□ -0.47
LINC00458-206ENST00000607494 LINC00528Q8N1L1 170 aa12.09□□□□□ -0.47
LINC00458-206ENST00000607494 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
LINC00458-206ENST00000607494 H3BM21 787 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms