RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 RFX1P22670 979 aa8.89□□□□□ -0.99
LINC00397-202ENST00000606785 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
LINC00397-202ENST00000606785 SRPK2P78362 688 aaKnown RBP8.89□□□□□ -0.99
LINC00397-202ENST00000606785 USTQ9Y2C2 406 aa8.89□□□□□ -0.99
LINC00397-202ENST00000606785 SOX11P35716 441 aa8.88□□□□□ -0.99
LINC00397-202ENST00000606785 APLP1P51693 650 aa8.88□□□□□ -0.99
LINC00397-202ENST00000606785 EPS8L1Q8TE68 723 aa8.88□□□□□ -0.99
LINC00397-202ENST00000606785 PATL2C9JE40 543 aaKnown RBP8.87□□□□□ -0.99
LINC00397-202ENST00000606785 NKX2-3Q8TAU0 364 aa8.87□□□□□ -0.99
LINC00397-202ENST00000606785 PRR7Q8TB68 274 aa8.87□□□□□ -0.99
LINC00397-202ENST00000606785 PALM3A6NDB9 673 aaPredicted RBP8.86□□□□□ -0.99
LINC00397-202ENST00000606785 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
LINC00397-202ENST00000606785 SYMPKQ92797 1274 aaKnown RBP8.86□□□□□ -0.99
LINC00397-202ENST00000606785 GZF1Q9H116 711 aaPredicted RBP8.86□□□□□ -0.99
LINC00397-202ENST00000606785 RNF40O75150 1001 aa8.85□□□□□ -0.99
LINC00397-202ENST00000606785 DGAT1O75907 488 aa8.85□□□□□ -0.99
LINC00397-202ENST00000606785 NR6A1Q15406 480 aa8.85□□□□□ -0.99
LINC00397-202ENST00000606785 TMCO4Q5TGY1 634 aa8.85□□□□□ -0.99
LINC00397-202ENST00000606785 TRIM67Q6ZTA4 783 aa8.85□□□□□ -0.99
LINC00397-202ENST00000606785 RETREG3Q86VR2 466 aa8.85□□□□□ -0.99
LINC00397-202ENST00000606785 BRD1O95696 1058 aa8.84□□□□□ -0.99
LINC00397-202ENST00000606785 LMOD1P29536 600 aaPredicted RBP8.84□□□□□ -0.99
LINC00397-202ENST00000606785 KMT5BQ4FZB7 885 aa8.84□□□□□ -0.99
LINC00397-202ENST00000606785 PKDCCQ504Y2 493 aa8.84□□□□□ -0.99
LINC00397-202ENST00000606785 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
LINC00397-202ENST00000606785 UCN2Q96RP3 112 aa8.84□□□□□ -0.99
LINC00397-202ENST00000606785 PER1O15534 1290 aaPredicted RBP8.83□□□□□ -1
LINC00397-202ENST00000606785 MYT1Q01538 1121 aa8.83□□□□□ -1
LINC00397-202ENST00000606785 SEMA3FQ13275 785 aa8.83□□□□□ -1
LINC00397-202ENST00000606785 DESI1Q6ICB0 168 aa8.83□□□□□ -1
LINC00397-202ENST00000606785 TFIP11Q9UBB9 837 aaKnown RBP8.83□□□□□ -1
LINC00397-202ENST00000606785 KCNA1Q09470 495 aa8.82□□□□□ -1
LINC00397-202ENST00000606785 MORN1Q5T089 497 aa8.82□□□□□ -1
LINC00397-202ENST00000606785 COPS2P61201 443 aa8.81□□□□□ -1
LINC00397-202ENST00000606785 PRR20EP86478 221 aa8.81□□□□□ -1
LINC00397-202ENST00000606785 PRR20CP86479 221 aa8.81□□□□□ -1
LINC00397-202ENST00000606785 PRR20DP86480 221 aa8.81□□□□□ -1
LINC00397-202ENST00000606785 PRR20BP86481 221 aa8.81□□□□□ -1
LINC00397-202ENST00000606785 PRR20AP86496 221 aa8.81□□□□□ -1
LINC00397-202ENST00000606785 Q3C1V9 767 aa8.81□□□□□ -1
LINC00397-202ENST00000606785 ACTN4O43707 911 aaKnown RBP8.8□□□□□ -1
LINC00397-202ENST00000606785 ZPR1O75312 459 aa8.8□□□□□ -1
LINC00397-202ENST00000606785 SLC19A1P41440 591 aa8.8□□□□□ -1
LINC00397-202ENST00000606785 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
LINC00397-202ENST00000606785 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
LINC00397-202ENST00000606785 ATG7O95352 703 aa8.79□□□□□ -1
LINC00397-202ENST00000606785 MFAP1P55081 439 aaKnown RBP8.79□□□□□ -1
LINC00397-202ENST00000606785 RGS22Q8NE09 1264 aa8.79□□□□□ -1
LINC00397-202ENST00000606785 MAFBQ9Y5Q3 323 aaPredicted RBP8.79□□□□□ -1
LINC00397-202ENST00000606785 PUS10Q3MIT2 529 aaKnown RBP8.78□□□□□ -1
LINC00397-202ENST00000606785 LYPD8Q6UX82 237 aa8.78□□□□□ -1
LINC00397-202ENST00000606785 POTECB2RU33 542 aa8.77□□□□□ -1.01
LINC00397-202ENST00000606785 NR1H3Q13133 447 aa8.77□□□□□ -1.01
LINC00397-202ENST00000606785 SPRYD7Q5W111 196 aa8.77□□□□□ -1.01
LINC00397-202ENST00000606785 TREML4Q6UXN2 200 aa8.77□□□□□ -1.01
LINC00397-202ENST00000606785 TBC1D9Q6ZT07 1266 aa8.77□□□□□ -1.01
LINC00397-202ENST00000606785 ZNF598Q86UK7 904 aaKnown RBP8.77□□□□□ -1.01
LINC00397-202ENST00000606785 PRR14Q9BWN1 585 aa8.77□□□□□ -1.01
LINC00397-202ENST00000606785 RNF223E7ERA6 249 aa8.76□□□□□ -1.01
LINC00397-202ENST00000606785 ATP9BO43861 1147 aa8.76□□□□□ -1.01
LINC00397-202ENST00000606785 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
LINC00397-202ENST00000606785 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
LINC00397-202ENST00000606785 CARNS1A5YM72 827 aa8.75□□□□□ -1.01
LINC00397-202ENST00000606785 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
LINC00397-202ENST00000606785 MTMR7Q9Y216 660 aa8.75□□□□□ -1.01
LINC00397-202ENST00000606785 TMEM88BA6NKF7 163 aa8.74□□□□□ -1.01
LINC00397-202ENST00000606785 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
LINC00397-202ENST00000606785 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
LINC00397-202ENST00000606785 ANKLE1Q8NAG6 615 aa8.74□□□□□ -1.01
LINC00397-202ENST00000606785 USB1Q9BQ65 265 aaKnown RBP8.74□□□□□ -1.01
LINC00397-202ENST00000606785 VRTNQ9H8Y1 702 aa8.74□□□□□ -1.01
LINC00397-202ENST00000606785 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
LINC00397-202ENST00000606785 SALL2Q9Y467 1007 aaPredicted RBP8.74□□□□□ -1.01
LINC00397-202ENST00000606785 ZBBXA8MT70 800 aa8.73□□□□□ -1.01
LINC00397-202ENST00000606785 BLOC1S3Q6QNY0 202 aa8.73□□□□□ -1.01
LINC00397-202ENST00000606785 FAM187AA6NFU0 413 aa8.72□□□□□ -1.01
LINC00397-202ENST00000606785 F12P00748 615 aaPredicted RBP8.72□□□□□ -1.01
LINC00397-202ENST00000606785 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
LINC00397-202ENST00000606785 NFATC2IPQ8NCF5 419 aa8.72□□□□□ -1.01
LINC00397-202ENST00000606785 PCDHB3Q9Y5E6 796 aa8.72□□□□□ -1.01
LINC00397-202ENST00000606785 ZC3H4Q9UPT8 1303 aaKnown RBP8.72□□□□□ -1.01
LINC00397-202ENST00000606785 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
LINC00397-202ENST00000606785 GDF9O60383 454 aa8.7□□□□□ -1.02
LINC00397-202ENST00000606785 ELOAQ14241 798 aaKnown RBP8.7□□□□□ -1.02
LINC00397-202ENST00000606785 PTPRNQ16849 979 aa8.7□□□□□ -1.02
LINC00397-202ENST00000606785 KANK4Q5T7N3 995 aaPredicted RBP8.7□□□□□ -1.02
LINC00397-202ENST00000606785 IVNS1ABPQ9Y6Y0 642 aa8.7□□□□□ -1.02
LINC00397-202ENST00000606785 PIK3CDO00329 1044 aa8.69□□□□□ -1.02
LINC00397-202ENST00000606785 JUNDP17535 347 aa8.69□□□□□ -1.02
LINC00397-202ENST00000606785 THAP11Q96EK4 314 aa8.69□□□□□ -1.02
LINC00397-202ENST00000606785 FMNL1O95466 1100 aaPredicted RBP8.68□□□□□ -1.02
LINC00397-202ENST00000606785 B4GALNT3Q6L9W6 998 aa8.68□□□□□ -1.02
LINC00397-202ENST00000606785 SCUBE3Q8IX30 993 aa8.68□□□□□ -1.02
LINC00397-202ENST00000606785 AAASQ9NRG9 546 aa8.68□□□□□ -1.02
LINC00397-202ENST00000606785 MAP10Q9P2G4 905 aa8.68□□□□□ -1.02
LINC00397-202ENST00000606785 USP17L3A6NCW0 530 aa8.67□□□□□ -1.02
LINC00397-202ENST00000606785 USP17L4A6NCW7 530 aa8.67□□□□□ -1.02
LINC00397-202ENST00000606785 NR1I2O75469 434 aa8.67□□□□□ -1.02
LINC00397-202ENST00000606785 FOXD4L5Q5VV16 416 aaPredicted RBP8.67□□□□□ -1.02
LINC00397-202ENST00000606785 USP17L2Q6R6M4 530 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms