RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 AFF2P51816 1311 aa17.15■□□□□ 0.34
TMEM38A-203ENST00000599479 USP6P35125 1406 aa17.14■□□□□ 0.33
TMEM38A-203ENST00000599479 ALS2Q96Q42 1657 aa17.14■□□□□ 0.33
TMEM38A-203ENST00000599479 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
TMEM38A-203ENST00000599479 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
TMEM38A-203ENST00000599479 NGLY1Q96IV0 654 aa17.14■□□□□ 0.33
TMEM38A-203ENST00000599479 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
TMEM38A-203ENST00000599479 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
TMEM38A-203ENST00000599479 TMF1P82094 1093 aa17.11■□□□□ 0.33
TMEM38A-203ENST00000599479 CD163L1Q9NR16 1453 aa17.11■□□□□ 0.33
TMEM38A-203ENST00000599479 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
TMEM38A-203ENST00000599479 BCL9LQ86UU0 1499 aa17.1■□□□□ 0.33
TMEM38A-203ENST00000599479 FAM83GA6ND36 823 aa17.09■□□□□ 0.33
TMEM38A-203ENST00000599479 USP19O94966 1318 aa17.09■□□□□ 0.33
TMEM38A-203ENST00000599479 TTC21BQ7Z4L5 1316 aa17.09■□□□□ 0.33
TMEM38A-203ENST00000599479 NINLQ9Y2I6 1382 aa17.09■□□□□ 0.33
TMEM38A-203ENST00000599479 SLIT2O94813 1529 aa17.09■□□□□ 0.33
TMEM38A-203ENST00000599479 EIF4G2P78344 907 aaKnown RBP eCLIP17.08■□□□□ 0.32
TMEM38A-203ENST00000599479 CDCA8Q53HL2 280 aa17.08■□□□□ 0.32
TMEM38A-203ENST00000599479 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
TMEM38A-203ENST00000599479 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.32
TMEM38A-203ENST00000599479 USP21Q9UK80 565 aa17.08■□□□□ 0.32
TMEM38A-203ENST00000599479 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
TMEM38A-203ENST00000599479 KTN1Q86UP2 1357 aaKnown RBP17.06■□□□□ 0.32
TMEM38A-203ENST00000599479 TMC1Q8TDI8 760 aa17.06■□□□□ 0.32
TMEM38A-203ENST00000599479 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
TMEM38A-203ENST00000599479 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
TMEM38A-203ENST00000599479 RXRBP28702 533 aa17.05■□□□□ 0.32
TMEM38A-203ENST00000599479 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
TMEM38A-203ENST00000599479 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
TMEM38A-203ENST00000599479 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
TMEM38A-203ENST00000599479 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
TMEM38A-203ENST00000599479 SOCS7O14512 581 aa17.04■□□□□ 0.32
TMEM38A-203ENST00000599479 GCP02774 474 aa17.04■□□□□ 0.32
TMEM38A-203ENST00000599479 NLRP6P59044 892 aa17.04■□□□□ 0.32
TMEM38A-203ENST00000599479 RBM6P78332 1123 aaKnown RBP17.04■□□□□ 0.32
TMEM38A-203ENST00000599479 HDGFL2Q7Z4V5 671 aaPredicted RBP17.04■□□□□ 0.32
TMEM38A-203ENST00000599479 CRYBG1Q9Y4K1 1723 aa17.04■□□□□ 0.32
TMEM38A-203ENST00000599479 ATRNO75882 1429 aa17.04■□□□□ 0.32
TMEM38A-203ENST00000599479 A0A1W2PP64 1363 aa17.03■□□□□ 0.32
TMEM38A-203ENST00000599479 USP31Q70CQ4 1352 aa17.03■□□□□ 0.32
TMEM38A-203ENST00000599479 MARF1Q9Y4F3 1742 aaKnown RBP17.03■□□□□ 0.32
TMEM38A-203ENST00000599479 CPDO75976 1380 aa17.02■□□□□ 0.32
TMEM38A-203ENST00000599479 ABCA3Q99758 1704 aa17.02■□□□□ 0.32
TMEM38A-203ENST00000599479 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
TMEM38A-203ENST00000599479 AKAP12Q02952 1782 aa17.02■□□□□ 0.31
TMEM38A-203ENST00000599479 CDK12Q9NYV4 1490 aaPredicted RBP17.01■□□□□ 0.31
TMEM38A-203ENST00000599479 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
TMEM38A-203ENST00000599479 ANKRD36BQ8N2N9 1353 aa17.01■□□□□ 0.31
TMEM38A-203ENST00000599479 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
TMEM38A-203ENST00000599479 VPS72Q15906 364 aa17■□□□□ 0.31
TMEM38A-203ENST00000599479 GJD4Q96KN9 370 aaPredicted RBP17■□□□□ 0.31
TMEM38A-203ENST00000599479 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
TMEM38A-203ENST00000599479 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
TMEM38A-203ENST00000599479 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
TMEM38A-203ENST00000599479 BTG4Q9NY30 223 aa16.99■□□□□ 0.31
TMEM38A-203ENST00000599479 SLIT3O75094 1523 aa16.99■□□□□ 0.31
TMEM38A-203ENST00000599479 MON2Q7Z3U7 1717 aa16.99■□□□□ 0.31
TMEM38A-203ENST00000599479 PIK3C2AO00443 1686 aa16.98■□□□□ 0.31
TMEM38A-203ENST00000599479 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
TMEM38A-203ENST00000599479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMEM38A-203ENST00000599479 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
TMEM38A-203ENST00000599479 C11orf95C9JLR9 678 aaPredicted RBP16.97■□□□□ 0.31
TMEM38A-203ENST00000599479 NME9Q86XW9 330 aa16.97■□□□□ 0.31
TMEM38A-203ENST00000599479 ZRANB1Q9UGI0 708 aa16.97■□□□□ 0.31
TMEM38A-203ENST00000599479 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.31
TMEM38A-203ENST00000599479 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
TMEM38A-203ENST00000599479 ARHGEF25Q86VW2 580 aa16.96■□□□□ 0.31
TMEM38A-203ENST00000599479 CARD14Q9BXL6 1004 aa16.96■□□□□ 0.31
TMEM38A-203ENST00000599479 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.96■□□□□ 0.3
TMEM38A-203ENST00000599479 NWD2Q9ULI1 1742 aa16.96■□□□□ 0.3
TMEM38A-203ENST00000599479 COL14A1Q05707 1796 aaKnown RBP16.95■□□□□ 0.3
TMEM38A-203ENST00000599479 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
TMEM38A-203ENST00000599479 FYB1O15117 783 aa16.93■□□□□ 0.3
TMEM38A-203ENST00000599479 OVOS2A0A0J9YW53 1432 aa16.93■□□□□ 0.3
TMEM38A-203ENST00000599479 OVOS2Q6IE36 1432 aa16.93■□□□□ 0.3
TMEM38A-203ENST00000599479 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
TMEM38A-203ENST00000599479 RGS12O14924 1447 aa16.92■□□□□ 0.3
TMEM38A-203ENST00000599479 SPATA31A5Q5VU36 1347 aa16.92■□□□□ 0.3
TMEM38A-203ENST00000599479 SPATA31A7Q8IWB4 1347 aa16.92■□□□□ 0.3
TMEM38A-203ENST00000599479 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
TMEM38A-203ENST00000599479 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
TMEM38A-203ENST00000599479 AXIN2Q9Y2T1 843 aa16.91■□□□□ 0.3
TMEM38A-203ENST00000599479 NFAT5O94916 1531 aa16.91■□□□□ 0.3
TMEM38A-203ENST00000599479 GLI3P10071 1580 aa16.9■□□□□ 0.3
TMEM38A-203ENST00000599479 LMO7Q8WWI1 1683 aa16.9■□□□□ 0.3
TMEM38A-203ENST00000599479 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
TMEM38A-203ENST00000599479 SPATA31A1Q5TZJ5 1347 aa16.89■□□□□ 0.29
TMEM38A-203ENST00000599479 COG3Q96JB2 828 aa16.88■□□□□ 0.29
TMEM38A-203ENST00000599479 MYOM1P52179 1685 aa16.88■□□□□ 0.29
TMEM38A-203ENST00000599479 EVA1CP58658 441 aa16.87■□□□□ 0.29
TMEM38A-203ENST00000599479 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
TMEM38A-203ENST00000599479 COL18A1P39060 1754 aa16.87■□□□□ 0.29
TMEM38A-203ENST00000599479 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
TMEM38A-203ENST00000599479 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
TMEM38A-203ENST00000599479 SEPT12Q8IYM1 358 aa16.86■□□□□ 0.29
TMEM38A-203ENST00000599479 GGNBP2Q9H3C7 697 aa16.86■□□□□ 0.29
TMEM38A-203ENST00000599479 PANK3Q9H999 370 aa16.86■□□□□ 0.29
TMEM38A-203ENST00000599479 STRN4Q9NRL3 753 aa16.86■□□□□ 0.29
TMEM38A-203ENST00000599479 BARGINQ6ZT62 677 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms