RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 MPHOSPH9Q99550 1183 aa22.67■■□□□ 1.22
FOXA3-202ENST00000594297 ADGRB1O14514 1584 aa22.66■■□□□ 1.22
FOXA3-202ENST00000594297 TULP4Q9NRJ4 1543 aa22.66■■□□□ 1.22
FOXA3-202ENST00000594297 R3HDM1Q15032 1099 aaKnown RBP22.65■■□□□ 1.22
FOXA3-202ENST00000594297 PHRF1Q9P1Y6 1649 aaKnown RBP22.64■■□□□ 1.22
FOXA3-202ENST00000594297 SPATA31A5Q5VU36 1347 aa22.64■■□□□ 1.22
FOXA3-202ENST00000594297 SPATA31A7Q8IWB4 1347 aa22.64■■□□□ 1.22
FOXA3-202ENST00000594297 RREB1Q92766 1687 aa22.62■■□□□ 1.21
FOXA3-202ENST00000594297 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
FOXA3-202ENST00000594297 PRR36Q9H6K5 1346 aa22.61■■□□□ 1.21
FOXA3-202ENST00000594297 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
FOXA3-202ENST00000594297 POGKQ9P215 609 aa22.61■■□□□ 1.21
FOXA3-202ENST00000594297 ITSN1Q15811 1721 aa22.6■■□□□ 1.21
FOXA3-202ENST00000594297 NUP188Q5SRE5 1749 aa22.6■■□□□ 1.21
FOXA3-202ENST00000594297 EZH2Q15910 746 aaKnown RBP22.59■■□□□ 1.21
FOXA3-202ENST00000594297 HIRIP3Q9BW71 556 aaPredicted RBP22.59■■□□□ 1.21
FOXA3-202ENST00000594297 EIF3AQ14152 1382 aaKnown RBP22.58■■□□□ 1.21
FOXA3-202ENST00000594297 PRDM11Q9NQV5 511 aa22.56■■□□□ 1.2
FOXA3-202ENST00000594297 MINK1Q8N4C8 1332 aaPredicted RBP22.56■■□□□ 1.2
FOXA3-202ENST00000594297 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
FOXA3-202ENST00000594297 SPATA31A1Q5TZJ5 1347 aa22.54■■□□□ 1.2
FOXA3-202ENST00000594297 ATP7BP35670 1465 aa22.54■■□□□ 1.2
FOXA3-202ENST00000594297 KIAA0232Q92628 1395 aa22.53■■□□□ 1.2
FOXA3-202ENST00000594297 CAMKK2Q96RR4 588 aa22.53■■□□□ 1.2
FOXA3-202ENST00000594297 TRAK1Q9UPV9 953 aa22.53■■□□□ 1.2
FOXA3-202ENST00000594297 TRIM37O94972 964 aa22.52■■□□□ 1.2
FOXA3-202ENST00000594297 NRKQ7Z2Y5 1582 aa22.51■■□□□ 1.19
FOXA3-202ENST00000594297 PAK3O75914 559 aaPredicted RBP22.51■■□□□ 1.19
FOXA3-202ENST00000594297 TOPAZ1Q8N9V7 1692 aa22.51■■□□□ 1.19
FOXA3-202ENST00000594297 PARD3Q8TEW0 1356 aa22.5■■□□□ 1.19
FOXA3-202ENST00000594297 NGDNQ8NEJ9 315 aaKnown RBP22.5■■□□□ 1.19
FOXA3-202ENST00000594297 WASLO00401 505 aaPredicted RBP22.49■■□□□ 1.19
FOXA3-202ENST00000594297 CHRNA2Q15822 529 aa22.49■■□□□ 1.19
FOXA3-202ENST00000594297 FAM196AQ6ZSG2 479 aa22.49■■□□□ 1.19
FOXA3-202ENST00000594297 STRN4Q9NRL3 753 aa22.48■■□□□ 1.19
FOXA3-202ENST00000594297 LMO7Q8WWI1 1683 aa22.47■■□□□ 1.19
FOXA3-202ENST00000594297 SSH2Q76I76 1423 aa22.47■■□□□ 1.19
FOXA3-202ENST00000594297 APBA3O96018 575 aa22.46■■□□□ 1.19
FOXA3-202ENST00000594297 PARP4Q9UKK3 1724 aaKnown RBP22.43■■□□□ 1.18
FOXA3-202ENST00000594297 USP35Q9P2H5 1018 aa22.43■■□□□ 1.18
FOXA3-202ENST00000594297 CAMTA1Q9Y6Y1 1673 aa22.42■■□□□ 1.18
FOXA3-202ENST00000594297 ZC3H6P61129 1189 aaKnown RBP22.42■■□□□ 1.18
FOXA3-202ENST00000594297 YY1P25490 414 aa22.41■■□□□ 1.18
FOXA3-202ENST00000594297 NUTM2GQ5VZR2 741 aa22.41■■□□□ 1.18
FOXA3-202ENST00000594297 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
FOXA3-202ENST00000594297 NUDT16Q96DE0 195 aaKnown RBP22.39■■□□□ 1.17
FOXA3-202ENST00000594297 RGPD3A6NKT7 1758 aaPredicted RBP22.39■■□□□ 1.17
FOXA3-202ENST00000594297 RGPD4Q7Z3J3 1758 aa22.39■■□□□ 1.17
FOXA3-202ENST00000594297 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
FOXA3-202ENST00000594297 RAB3GAP2Q9H2M9 1393 aa22.38■■□□□ 1.17
FOXA3-202ENST00000594297 PEAK1Q9H792 1746 aa22.38■■□□□ 1.17
FOXA3-202ENST00000594297 PDE3BQ13370 1112 aa22.38■■□□□ 1.17
FOXA3-202ENST00000594297 KDM2AQ9Y2K7 1162 aa22.37■■□□□ 1.17
FOXA3-202ENST00000594297 LRRC37A3O60309 1634 aa22.36■■□□□ 1.17
FOXA3-202ENST00000594297 LARP1Q6PKG0 1096 aaKnown RBP22.36■■□□□ 1.17
FOXA3-202ENST00000594297 NBPF8Q3BBV2 869 aa22.35■■□□□ 1.17
FOXA3-202ENST00000594297 NBPF14Q5TI25 921 aa22.35■■□□□ 1.17
FOXA3-202ENST00000594297 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
FOXA3-202ENST00000594297 CPDO75976 1380 aa22.35■■□□□ 1.17
FOXA3-202ENST00000594297 CASZ1Q86V15 1759 aa22.35■■□□□ 1.17
FOXA3-202ENST00000594297 EVA1CP58658 441 aa22.34■■□□□ 1.17
FOXA3-202ENST00000594297 COL5A2P05997 1499 aaPredicted RBP22.34■■□□□ 1.17
FOXA3-202ENST00000594297 SBF2Q86WG5 1849 aa22.34■■□□□ 1.17
FOXA3-202ENST00000594297 USP19O94966 1318 aa22.33■■□□□ 1.17
FOXA3-202ENST00000594297 ACEP12821 1306 aa22.33■■□□□ 1.17
FOXA3-202ENST00000594297 TCP11L2Q8N4U5 519 aa22.33■■□□□ 1.17
FOXA3-202ENST00000594297 NINLQ9Y2I6 1382 aa22.33■■□□□ 1.17
FOXA3-202ENST00000594297 WNK3Q9BYP7 1800 aa22.33■■□□□ 1.16
FOXA3-202ENST00000594297 PPP1R1BQ9UD71 204 aaPredicted RBP22.32■■□□□ 1.16
FOXA3-202ENST00000594297 SPON1Q9HCB6 807 aa22.31■■□□□ 1.16
FOXA3-202ENST00000594297 OVOS2A0A0G2JMS6 1433 aa22.31■■□□□ 1.16
FOXA3-202ENST00000594297 OVOS2A0A0J9YW53 1432 aa22.31■■□□□ 1.16
FOXA3-202ENST00000594297 OVOS2Q6IE36 1432 aa22.31■■□□□ 1.16
FOXA3-202ENST00000594297 CDK19Q9BWU1 502 aa22.3■■□□□ 1.16
FOXA3-202ENST00000594297 KCNQ2O43526 872 aa22.29■■□□□ 1.16
FOXA3-202ENST00000594297 MYOM1P52179 1685 aa22.28■■□□□ 1.16
FOXA3-202ENST00000594297 THRAP3Q9Y2W1 955 aaKnown RBP22.28■■□□□ 1.16
FOXA3-202ENST00000594297 CRB1P82279 1406 aa22.27■■□□□ 1.16
FOXA3-202ENST00000594297 ABTB2Q8N961 1025 aa22.27■■□□□ 1.16
FOXA3-202ENST00000594297 KIAA1210Q9ULL0 1709 aa22.27■■□□□ 1.16
FOXA3-202ENST00000594297 ANO8Q9HCE9 1232 aaPredicted RBP22.25■■□□□ 1.15
FOXA3-202ENST00000594297 CCDC61Q9Y6R9 512 aa22.25■■□□□ 1.15
FOXA3-202ENST00000594297 AKAP12Q02952 1782 aa22.25■■□□□ 1.15
FOXA3-202ENST00000594297 PLEKHG3A1L390 1219 aa22.24■■□□□ 1.15
FOXA3-202ENST00000594297 SLIT3O75094 1523 aa22.24■■□□□ 1.15
FOXA3-202ENST00000594297 PPIP5K1Q6PFW1 1433 aa22.23■■□□□ 1.15
FOXA3-202ENST00000594297 STAC3Q96MF2 364 aa22.23■■□□□ 1.15
FOXA3-202ENST00000594297 GCP02774 474 aa22.22■■□□□ 1.15
FOXA3-202ENST00000594297 COL18A1P39060 1754 aa22.22■■□□□ 1.15
FOXA3-202ENST00000594297 PIK3C2AO00443 1686 aa22.21■■□□□ 1.15
FOXA3-202ENST00000594297 DCAF8L1A6NGE4 600 aa22.2■■□□□ 1.14
FOXA3-202ENST00000594297 C11orf95C9JLR9 678 aaPredicted RBP22.2■■□□□ 1.14
FOXA3-202ENST00000594297 NLRP13Q86W25 1043 aa22.2■■□□□ 1.14
FOXA3-202ENST00000594297 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
FOXA3-202ENST00000594297 QRICH2Q9H0J4 1663 aa22.2■■□□□ 1.14
FOXA3-202ENST00000594297 ZBTB7CA1YPR0 619 aa22.18■■□□□ 1.14
FOXA3-202ENST00000594297 PTF1AQ7RTS3 328 aa22.18■■□□□ 1.14
FOXA3-202ENST00000594297 PDGFDQ9GZP0 370 aaPredicted RBP22.18■■□□□ 1.14
FOXA3-202ENST00000594297 AATKQ6ZMQ8 1374 aa22.17■■□□□ 1.14
FOXA3-202ENST00000594297 PLSCR1O15162 318 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms