RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 VPS72Q15906 364 aa24.25■■□□□ 1.47
LTBP4-209ENST00000594116 NRAPQ86VF7 1730 aa24.24■■□□□ 1.47
LTBP4-209ENST00000594116 BRWD3Q6RI45 1802 aa24.24■■□□□ 1.47
LTBP4-209ENST00000594116 PLEKHG5O94827 1062 aa24.24■■□□□ 1.47
LTBP4-209ENST00000594116 NGDNQ8NEJ9 315 aaKnown RBP24.24■■□□□ 1.47
LTBP4-209ENST00000594116 COL14A1Q05707 1796 aaKnown RBP24.24■■□□□ 1.47
LTBP4-209ENST00000594116 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
LTBP4-209ENST00000594116 FAM83GA6ND36 823 aa24.21■■□□□ 1.47
LTBP4-209ENST00000594116 ZEB1P37275 1124 aaPredicted RBP24.21■■□□□ 1.47
LTBP4-209ENST00000594116 CCDC125Q86Z20 511 aa24.21■■□□□ 1.47
LTBP4-209ENST00000594116 NBPF8Q3BBV2 869 aa24.2■■□□□ 1.46
LTBP4-209ENST00000594116 NBPF1Q3BBV0 1214 aa24.19■■□□□ 1.46
LTBP4-209ENST00000594116 CDK19Q9BWU1 502 aa24.19■■□□□ 1.46
LTBP4-209ENST00000594116 POLR3AO14802 1390 aaPredicted RBP24.18■■□□□ 1.46
LTBP4-209ENST00000594116 ONECUT3O60422 494 aaPredicted RBP24.17■■□□□ 1.46
LTBP4-209ENST00000594116 PHRF1Q9P1Y6 1649 aaKnown RBP24.17■■□□□ 1.46
LTBP4-209ENST00000594116 PAK3O75914 559 aaPredicted RBP24.16■■□□□ 1.46
LTBP4-209ENST00000594116 SEPT12Q8IYM1 358 aa24.15■■□□□ 1.46
LTBP4-209ENST00000594116 CCDC9Q9Y3X0 531 aaKnown RBP24.15■■□□□ 1.46
LTBP4-209ENST00000594116 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
LTBP4-209ENST00000594116 BTG4Q9NY30 223 aa24.14■■□□□ 1.45
LTBP4-209ENST00000594116 QRICH2Q9H0J4 1663 aa24.14■■□□□ 1.45
LTBP4-209ENST00000594116 BLMP54132 1417 aaPredicted RBP24.13■■□□□ 1.45
LTBP4-209ENST00000594116 CENPJQ9HC77 1338 aaPredicted RBP24.12■■□□□ 1.45
LTBP4-209ENST00000594116 PLEKHG3A1L390 1219 aa24.12■■□□□ 1.45
LTBP4-209ENST00000594116 ACEP12821 1306 aa24.11■■□□□ 1.45
LTBP4-209ENST00000594116 PRDM11Q9NQV5 511 aa24.09■■□□□ 1.45
LTBP4-209ENST00000594116 SRCAPQ6ZRS2 3230 aa24.08■■□□□ 1.45
LTBP4-209ENST00000594116 KIAA0232Q92628 1395 aa24.07■■□□□ 1.44
LTBP4-209ENST00000594116 KRT27Q7Z3Y8 459 aa24.07■■□□□ 1.44
LTBP4-209ENST00000594116 PPIP5K1Q6PFW1 1433 aa24.07■■□□□ 1.44
LTBP4-209ENST00000594116 SPATA31A5Q5VU36 1347 aa24.07■■□□□ 1.44
LTBP4-209ENST00000594116 SPATA31A7Q8IWB4 1347 aa24.07■■□□□ 1.44
LTBP4-209ENST00000594116 THSD7AQ9UPZ6 1657 aa24.06■■□□□ 1.44
LTBP4-209ENST00000594116 NRKQ7Z2Y5 1582 aa24.06■■□□□ 1.44
LTBP4-209ENST00000594116 ROCK2O75116 1388 aaKnown RBP24.05■■□□□ 1.44
LTBP4-209ENST00000594116 SRPK2P78362 688 aaKnown RBP24.05■■□□□ 1.44
LTBP4-209ENST00000594116 FAM98CQ17RN3 349 aaKnown RBP24.05■■□□□ 1.44
LTBP4-209ENST00000594116 ZRANB1Q9UGI0 708 aa24.04■■□□□ 1.44
LTBP4-209ENST00000594116 BRD4O60885 1362 aaPredicted RBP24.03■■□□□ 1.44
LTBP4-209ENST00000594116 A0A0G2JS52 829 aa24.02■■□□□ 1.44
LTBP4-209ENST00000594116 MYT1Q01538 1121 aa24.02■■□□□ 1.44
LTBP4-209ENST00000594116 NUTM2GQ5VZR2 741 aa24.02■■□□□ 1.44
LTBP4-209ENST00000594116 CABP2Q9NPB3 220 aa24.02■■□□□ 1.44
LTBP4-209ENST00000594116 USP19O94966 1318 aa24.02■■□□□ 1.44
LTBP4-209ENST00000594116 SF3B2Q13435 895 aaKnown RBP24■■□□□ 1.43
LTBP4-209ENST00000594116 CHRNA2Q15822 529 aa24■■□□□ 1.43
LTBP4-209ENST00000594116 ABTB2Q8N961 1025 aa24■■□□□ 1.43
LTBP4-209ENST00000594116 LMO7Q8WWI1 1683 aa23.99■■□□□ 1.43
LTBP4-209ENST00000594116 ZC3H6P61129 1189 aaKnown RBP23.99■■□□□ 1.43
LTBP4-209ENST00000594116 CPDO75976 1380 aa23.99■■□□□ 1.43
LTBP4-209ENST00000594116 SPATA31A1Q5TZJ5 1347 aa23.98■■□□□ 1.43
LTBP4-209ENST00000594116 RGPD1P0DJD0 1748 aa23.97■■□□□ 1.43
LTBP4-209ENST00000594116 USP6P35125 1406 aa23.97■■□□□ 1.43
LTBP4-209ENST00000594116 DEFB132Q7Z7B7 95 aa23.97■■□□□ 1.43
LTBP4-209ENST00000594116 EVC2Q86UK5 1308 aa23.96■■□□□ 1.43
LTBP4-209ENST00000594116 CARD11Q9BXL7 1154 aa23.96■■□□□ 1.43
LTBP4-209ENST00000594116 CAMTA1Q9Y6Y1 1673 aa23.95■■□□□ 1.43
LTBP4-209ENST00000594116 SSH2Q76I76 1423 aa23.95■■□□□ 1.42
LTBP4-209ENST00000594116 NLRP13Q86W25 1043 aa23.95■■□□□ 1.42
LTBP4-209ENST00000594116 STRN4Q9NRL3 753 aa23.94■■□□□ 1.42
LTBP4-209ENST00000594116 CABP1Q9NZU7 370 aa23.94■■□□□ 1.42
LTBP4-209ENST00000594116 GCP02774 474 aa23.92■■□□□ 1.42
LTBP4-209ENST00000594116 SLIT3O75094 1523 aa23.92■■□□□ 1.42
LTBP4-209ENST00000594116 PIK3C2AO00443 1686 aa23.92■■□□□ 1.42
LTBP4-209ENST00000594116 AKAP12Q02952 1782 aa23.91■■□□□ 1.42
LTBP4-209ENST00000594116 TNS1Q9HBL0 1735 aaKnown RBP23.91■■□□□ 1.42
LTBP4-209ENST00000594116 USP47Q96K76 1375 aa23.91■■□□□ 1.42
LTBP4-209ENST00000594116 BAG6P46379 1132 aa23.9■■□□□ 1.42
LTBP4-209ENST00000594116 EVA1CP58658 441 aa23.89■■□□□ 1.41
LTBP4-209ENST00000594116 BARGINQ6ZT62 677 aa23.89■■□□□ 1.41
LTBP4-209ENST00000594116 FAM182BQ5T319 152 aa23.88■■□□□ 1.41
LTBP4-209ENST00000594116 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
LTBP4-209ENST00000594116 DISP2A7MBM2 1401 aa23.87■■□□□ 1.41
LTBP4-209ENST00000594116 SBNO2Q9Y2G9 1366 aa23.87■■□□□ 1.41
LTBP4-209ENST00000594116 NLRP6P59044 892 aa23.86■■□□□ 1.41
LTBP4-209ENST00000594116 LARP1Q6PKG0 1096 aaKnown RBP23.86■■□□□ 1.41
LTBP4-209ENST00000594116 ZNF692Q9BU19 519 aaPredicted RBP23.85■■□□□ 1.41
LTBP4-209ENST00000594116 USP35Q9P2H5 1018 aa23.85■■□□□ 1.41
LTBP4-209ENST00000594116 TCP11L2Q8N4U5 519 aa23.84■■□□□ 1.41
LTBP4-209ENST00000594116 PARP4Q9UKK3 1724 aaKnown RBP23.84■■□□□ 1.41
LTBP4-209ENST00000594116 AATKQ6ZMQ8 1374 aa23.83■■□□□ 1.41
LTBP4-209ENST00000594116 THRAP3Q9Y2W1 955 aaKnown RBP23.83■■□□□ 1.41
LTBP4-209ENST00000594116 CPSF1Q10570 1443 aaKnown RBP23.83■■□□□ 1.4
LTBP4-209ENST00000594116 COL18A1P39060 1754 aa23.83■■□□□ 1.4
LTBP4-209ENST00000594116 MON2Q7Z3U7 1717 aa23.82■■□□□ 1.4
LTBP4-209ENST00000594116 EIF4G2P78344 907 aaKnown RBP eCLIP23.82■■□□□ 1.4
LTBP4-209ENST00000594116 FAM196AQ6ZSG2 479 aa23.82■■□□□ 1.4
LTBP4-209ENST00000594116 CRB1P82279 1406 aa23.82■■□□□ 1.4
LTBP4-209ENST00000594116 TTC21BQ7Z4L5 1316 aa23.81■■□□□ 1.4
LTBP4-209ENST00000594116 TTC21AQ8NDW8 1320 aa23.8■■□□□ 1.4
LTBP4-209ENST00000594116 HSPA5P11021 654 aaKnown RBP23.79■■□□□ 1.4
LTBP4-209ENST00000594116 EN1Q05925 392 aaPredicted RBP23.79■■□□□ 1.4
LTBP4-209ENST00000594116 LRP5O75197 1615 aa23.79■■□□□ 1.4
LTBP4-209ENST00000594116 ST20-MTHFSA0A0A6YYL1 179 aa23.78■■□□□ 1.4
LTBP4-209ENST00000594116 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
LTBP4-209ENST00000594116 KTN1Q86UP2 1357 aaKnown RBP23.77■■□□□ 1.4
LTBP4-209ENST00000594116 USP54Q70EL1 1684 aa23.76■■□□□ 1.39
LTBP4-209ENST00000594116 WNK3Q9BYP7 1800 aa23.76■■□□□ 1.39
LTBP4-209ENST00000594116 KCNH5Q8NCM2 988 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms