RNA–Protein interactions for RNA: ENST00000594044.1

ARHGEF1-206, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 834 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-206ENST00000594044 EP400Q96L91 3159 aa19.45■□□□□ 0.7
ARHGEF1-206ENST00000594044 VPS72Q15906 364 aa19.44■□□□□ 0.7
ARHGEF1-206ENST00000594044 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
ARHGEF1-206ENST00000594044 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
ARHGEF1-206ENST00000594044 NBPF8Q3BBV2 869 aa19.43■□□□□ 0.7
ARHGEF1-206ENST00000594044 QRICH2Q9H0J4 1663 aa19.43■□□□□ 0.7
ARHGEF1-206ENST00000594044 ACEP12821 1306 aa19.42■□□□□ 0.7
ARHGEF1-206ENST00000594044 ONECUT3O60422 494 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF1-206ENST00000594044 PLEKHG5O94827 1062 aa19.41■□□□□ 0.7
ARHGEF1-206ENST00000594044 COL14A1Q05707 1796 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-206ENST00000594044 NRAPQ86VF7 1730 aa19.4■□□□□ 0.7
ARHGEF1-206ENST00000594044 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-206ENST00000594044 BRWD3Q6RI45 1802 aa19.39■□□□□ 0.7
ARHGEF1-206ENST00000594044 SRPK2P78362 688 aaKnown RBP19.37■□□□□ 0.69
ARHGEF1-206ENST00000594044 CABP2Q9NPB3 220 aa19.37■□□□□ 0.69
ARHGEF1-206ENST00000594044 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
ARHGEF1-206ENST00000594044 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
ARHGEF1-206ENST00000594044 BTG4Q9NY30 223 aa19.36■□□□□ 0.69
ARHGEF1-206ENST00000594044 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
ARHGEF1-206ENST00000594044 BRD4O60885 1362 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF1-206ENST00000594044 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF1-206ENST00000594044 CCDC125Q86Z20 511 aa19.34■□□□□ 0.69
ARHGEF1-206ENST00000594044 SEPT12Q8IYM1 358 aa19.34■□□□□ 0.69
ARHGEF1-206ENST00000594044 EVC2Q86UK5 1308 aa19.32■□□□□ 0.68
ARHGEF1-206ENST00000594044 PRDM11Q9NQV5 511 aa19.32■□□□□ 0.68
ARHGEF1-206ENST00000594044 CABP1Q9NZU7 370 aa19.32■□□□□ 0.68
ARHGEF1-206ENST00000594044 USP19O94966 1318 aa19.31■□□□□ 0.68
ARHGEF1-206ENST00000594044 ABTB2Q8N961 1025 aa19.31■□□□□ 0.68
ARHGEF1-206ENST00000594044 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
ARHGEF1-206ENST00000594044 KIAA0232Q92628 1395 aa19.31■□□□□ 0.68
ARHGEF1-206ENST00000594044 SPATA31A5Q5VU36 1347 aa19.3■□□□□ 0.68
ARHGEF1-206ENST00000594044 SPATA31A7Q8IWB4 1347 aa19.3■□□□□ 0.68
ARHGEF1-206ENST00000594044 NUTM2GQ5VZR2 741 aa19.3■□□□□ 0.68
ARHGEF1-206ENST00000594044 USP6P35125 1406 aa19.29■□□□□ 0.68
ARHGEF1-206ENST00000594044 SSH2Q76I76 1423 aa19.29■□□□□ 0.68
ARHGEF1-206ENST00000594044 SBNO2Q9Y2G9 1366 aa19.29■□□□□ 0.68
ARHGEF1-206ENST00000594044 NRKQ7Z2Y5 1582 aa19.28■□□□□ 0.68
ARHGEF1-206ENST00000594044 NLRP13Q86W25 1043 aa19.28■□□□□ 0.68
ARHGEF1-206ENST00000594044 CPDO75976 1380 aa19.28■□□□□ 0.68
ARHGEF1-206ENST00000594044 ZC3H6P61129 1189 aaKnown RBP19.27■□□□□ 0.68
ARHGEF1-206ENST00000594044 CHRNA2Q15822 529 aa19.26■□□□□ 0.67
ARHGEF1-206ENST00000594044 FAM98CQ17RN3 349 aaKnown RBP19.26■□□□□ 0.67
ARHGEF1-206ENST00000594044 KRT27Q7Z3Y8 459 aa19.26■□□□□ 0.67
ARHGEF1-206ENST00000594044 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
ARHGEF1-206ENST00000594044 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
ARHGEF1-206ENST00000594044 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
ARHGEF1-206ENST00000594044 LMO7Q8WWI1 1683 aa19.25■□□□□ 0.67
ARHGEF1-206ENST00000594044 THSD7AQ9UPZ6 1657 aa19.25■□□□□ 0.67
ARHGEF1-206ENST00000594044 GCP02774 474 aa19.25■□□□□ 0.67
ARHGEF1-206ENST00000594044 ZNF692Q9BU19 519 aaPredicted RBP19.25■□□□□ 0.67
ARHGEF1-206ENST00000594044 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
ARHGEF1-206ENST00000594044 CARD11Q9BXL7 1154 aa19.24■□□□□ 0.67
ARHGEF1-206ENST00000594044 CAMTA1Q9Y6Y1 1673 aa19.24■□□□□ 0.67
ARHGEF1-206ENST00000594044 CPSF1Q10570 1443 aaKnown RBP19.22■□□□□ 0.67
ARHGEF1-206ENST00000594044 SLIT3O75094 1523 aa19.21■□□□□ 0.67
ARHGEF1-206ENST00000594044 PIK3C2AO00443 1686 aa19.21■□□□□ 0.67
ARHGEF1-206ENST00000594044 NLRP6P59044 892 aa19.21■□□□□ 0.67
ARHGEF1-206ENST00000594044 TTC21BQ7Z4L5 1316 aa19.2■□□□□ 0.66
ARHGEF1-206ENST00000594044 STRN4Q9NRL3 753 aa19.19■□□□□ 0.66
ARHGEF1-206ENST00000594044 BARGINQ6ZT62 677 aa19.18■□□□□ 0.66
ARHGEF1-206ENST00000594044 PUS7Q96PZ0 661 aaKnown RBP19.18■□□□□ 0.66
ARHGEF1-206ENST00000594044 COL18A1P39060 1754 aa19.18■□□□□ 0.66
ARHGEF1-206ENST00000594044 TTC21AQ8NDW8 1320 aa19.18■□□□□ 0.66
ARHGEF1-206ENST00000594044 MON2Q7Z3U7 1717 aa19.17■□□□□ 0.66
ARHGEF1-206ENST00000594044 A0A0G2JS52 829 aa19.17■□□□□ 0.66
ARHGEF1-206ENST00000594044 EVA1CP58658 441 aa19.17■□□□□ 0.66
ARHGEF1-206ENST00000594044 MYT1Q01538 1121 aa19.17■□□□□ 0.66
ARHGEF1-206ENST00000594044 AATKQ6ZMQ8 1374 aa19.17■□□□□ 0.66
ARHGEF1-206ENST00000594044 SRCAPQ6ZRS2 3230 aa19.16■□□□□ 0.66
ARHGEF1-206ENST00000594044 LARP1Q6PKG0 1096 aaKnown RBP19.16■□□□□ 0.66
ARHGEF1-206ENST00000594044 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
ARHGEF1-206ENST00000594044 COL5A2P05997 1499 aaPredicted RBP19.15■□□□□ 0.66
ARHGEF1-206ENST00000594044 CD163L1Q9NR16 1453 aa19.15■□□□□ 0.66
ARHGEF1-206ENST00000594044 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.65
ARHGEF1-206ENST00000594044 DEFB132Q7Z7B7 95 aa19.14■□□□□ 0.65
ARHGEF1-206ENST00000594044 ZRANB1Q9UGI0 708 aa19.14■□□□□ 0.65
ARHGEF1-206ENST00000594044 TCP11L2Q8N4U5 519 aa19.13■□□□□ 0.65
ARHGEF1-206ENST00000594044 TESK2Q96S53 571 aa19.13■□□□□ 0.65
ARHGEF1-206ENST00000594044 THRAP3Q9Y2W1 955 aaKnown RBP19.13■□□□□ 0.65
ARHGEF1-206ENST00000594044 RGPD1P0DJD0 1748 aa19.12■□□□□ 0.65
ARHGEF1-206ENST00000594044 USP54Q70EL1 1684 aa19.12■□□□□ 0.65
ARHGEF1-206ENST00000594044 ARHGEF25Q86VW2 580 aa19.12■□□□□ 0.65
ARHGEF1-206ENST00000594044 KCNH5Q8NCM2 988 aa19.12■□□□□ 0.65
ARHGEF1-206ENST00000594044 USP31Q70CQ4 1352 aa19.11■□□□□ 0.65
ARHGEF1-206ENST00000594044 FAM182BQ5T319 152 aa19.11■□□□□ 0.65
ARHGEF1-206ENST00000594044 CRB1P82279 1406 aa19.1■□□□□ 0.65
ARHGEF1-206ENST00000594044 SLC12A5Q9H2X9 1139 aa19.1■□□□□ 0.65
ARHGEF1-206ENST00000594044 USP35Q9P2H5 1018 aa19.1■□□□□ 0.65
ARHGEF1-206ENST00000594044 RGPD5Q99666 1765 aa19.1■□□□□ 0.65
ARHGEF1-206ENST00000594044 NFAT5O94916 1531 aa19.1■□□□□ 0.65
ARHGEF1-206ENST00000594044 PARP4Q9UKK3 1724 aaKnown RBP19.09■□□□□ 0.65
ARHGEF1-206ENST00000594044 ST20-MTHFSA0A0A6YYL1 179 aa19.09■□□□□ 0.65
ARHGEF1-206ENST00000594044 SLC24A1O60721 1099 aa19.09■□□□□ 0.65
ARHGEF1-206ENST00000594044 FAM196AQ6ZSG2 479 aa19.09■□□□□ 0.65
ARHGEF1-206ENST00000594044 AXIN2Q9Y2T1 843 aa19.09■□□□□ 0.65
ARHGEF1-206ENST00000594044 TNS1Q9HBL0 1735 aaKnown RBP19.08■□□□□ 0.65
ARHGEF1-206ENST00000594044 BAG6P46379 1132 aa19.08■□□□□ 0.64
ARHGEF1-206ENST00000594044 DISP2A7MBM2 1401 aa19.08■□□□□ 0.64
ARHGEF1-206ENST00000594044 ABCC6O95255 1503 aa19.06■□□□□ 0.64
ARHGEF1-206ENST00000594044 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms