RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
TPM4-214ENST00000591645 CABLES1Q8TDN4 633 aa8.66□□□□□ -1.02
TPM4-214ENST00000591645 FAM117AQ9C073 453 aa8.66□□□□□ -1.02
TPM4-214ENST00000591645 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
TPM4-214ENST00000591645 QPCTQ16769 361 aa8.65□□□□□ -1.02
TPM4-214ENST00000591645 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
TPM4-214ENST00000591645 LYPD8Q6UX82 237 aa8.65□□□□□ -1.02
TPM4-214ENST00000591645 EVA1BQ9NVM1 165 aa8.65□□□□□ -1.02
TPM4-214ENST00000591645 SIAH2O43255 324 aa8.64□□□□□ -1.03
TPM4-214ENST00000591645 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
TPM4-214ENST00000591645 SENP2Q9HC62 589 aa8.64□□□□□ -1.03
TPM4-214ENST00000591645 TERTO14746 1132 aaKnown RBP8.63□□□□□ -1.03
TPM4-214ENST00000591645 KCNH2Q12809 1159 aa8.63□□□□□ -1.03
TPM4-214ENST00000591645 CSPP1Q1MSJ5 1256 aa8.63□□□□□ -1.03
TPM4-214ENST00000591645 EHBP1Q8NDI1 1231 aa8.63□□□□□ -1.03
TPM4-214ENST00000591645 SH3BP2P78314 561 aa8.62□□□□□ -1.03
TPM4-214ENST00000591645 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
TPM4-214ENST00000591645 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
TPM4-214ENST00000591645 NUTM2BA6NNL0 878 aaPredicted RBP8.61□□□□□ -1.03
TPM4-214ENST00000591645 NUTM2EB1AL46 878 aaPredicted RBP8.61□□□□□ -1.03
TPM4-214ENST00000591645 WIPF1O43516 503 aa8.61□□□□□ -1.03
TPM4-214ENST00000591645 F12P00748 615 aaPredicted RBP8.61□□□□□ -1.03
TPM4-214ENST00000591645 NUTM2DQ5VT03 806 aaPredicted RBP8.61□□□□□ -1.03
TPM4-214ENST00000591645 NUTM2AQ8IVF1 878 aaPredicted RBP8.61□□□□□ -1.03
TPM4-214ENST00000591645 NEUROD2Q15784 382 aa8.6□□□□□ -1.03
TPM4-214ENST00000591645 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
TPM4-214ENST00000591645 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
TPM4-214ENST00000591645 UNC93B1Q9H1C4 597 aa8.6□□□□□ -1.03
TPM4-214ENST00000591645 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
TPM4-214ENST00000591645 BMP1P13497 986 aa8.59□□□□□ -1.03
TPM4-214ENST00000591645 BRPF1P55201 1214 aaPredicted RBP8.59□□□□□ -1.03
TPM4-214ENST00000591645 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
TPM4-214ENST00000591645 PPP2R2DQ66LE6 453 aa8.59□□□□□ -1.03
TPM4-214ENST00000591645 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
TPM4-214ENST00000591645 WASF2Q9Y6W5 498 aa8.59□□□□□ -1.03
TPM4-214ENST00000591645 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
TPM4-214ENST00000591645 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
TPM4-214ENST00000591645 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
TPM4-214ENST00000591645 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
TPM4-214ENST00000591645 BAP1Q92560 729 aa8.57□□□□□ -1.04
TPM4-214ENST00000591645 INSM1Q01101 510 aaPredicted RBP8.56□□□□□ -1.04
TPM4-214ENST00000591645 STK17AQ9UEE5 414 aa8.56□□□□□ -1.04
TPM4-214ENST00000591645 ZNF511Q8NB15 262 aa8.55□□□□□ -1.04
TPM4-214ENST00000591645 PROCA1Q8NCQ7 364 aaPredicted RBP8.55□□□□□ -1.04
TPM4-214ENST00000591645 MAP10Q9P2G4 905 aa8.55□□□□□ -1.04
TPM4-214ENST00000591645 TLL2Q9Y6L7 1015 aa8.55□□□□□ -1.04
TPM4-214ENST00000591645 CTHP32929 405 aa8.54□□□□□ -1.04
TPM4-214ENST00000591645 TSC1Q92574 1164 aa8.54□□□□□ -1.04
TPM4-214ENST00000591645 FBXO31Q5XUX0 539 aaPredicted RBP8.53□□□□□ -1.04
TPM4-214ENST00000591645 ARMC2Q8NEN0 867 aa8.52□□□□□ -1.05
TPM4-214ENST00000591645 NXF1Q9UBU9 619 aaKnown RBP8.52□□□□□ -1.05
TPM4-214ENST00000591645 VARSP26640 1264 aaKnown RBP8.51□□□□□ -1.05
TPM4-214ENST00000591645 VEGFBP49765 207 aa8.51□□□□□ -1.05
TPM4-214ENST00000591645 MPNDQ8N594 471 aa8.51□□□□□ -1.05
TPM4-214ENST00000591645 CTDSPL2Q05D32 466 aa8.5□□□□□ -1.05
TPM4-214ENST00000591645 SLC16A10Q8TF71 515 aa8.5□□□□□ -1.05
TPM4-214ENST00000591645 PCMTD1Q96MG8 357 aaPredicted RBP8.5□□□□□ -1.05
TPM4-214ENST00000591645 ZFP42Q96MM3 310 aa8.5□□□□□ -1.05
TPM4-214ENST00000591645 NNTQ13423 1086 aa8.49□□□□□ -1.05
TPM4-214ENST00000591645 NBPF14Q5TI25 921 aa8.49□□□□□ -1.05
TPM4-214ENST00000591645 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
TPM4-214ENST00000591645 GMPRP36959 345 aa8.48□□□□□ -1.05
TPM4-214ENST00000591645 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.054e-10■□□□□ 9.3
TPM4-214ENST00000591645 RFC5P40937 340 aa8.47□□□□□ -1.05
TPM4-214ENST00000591645 TIMP2P16035 220 aa8.46□□□□□ -1.06
TPM4-214ENST00000591645 BPHLQ86WA6 291 aaPredicted RBP8.46□□□□□ -1.06
TPM4-214ENST00000591645 FAM174AQ8TBP5 190 aa8.46□□□□□ -1.06
TPM4-214ENST00000591645 LRRN4Q8WUT4 740 aa8.46□□□□□ -1.06
TPM4-214ENST00000591645 FOXJ1Q92949 421 aa8.46□□□□□ -1.06
TPM4-214ENST00000591645 ATP1B4Q9UN42 357 aaPredicted RBP8.46□□□□□ -1.06
TPM4-214ENST00000591645 ZC3H4Q9UPT8 1303 aaKnown RBP8.46□□□□□ -1.06
TPM4-214ENST00000591645 AP1G2O75843 785 aa8.45□□□□□ -1.06
TPM4-214ENST00000591645 USP17L8P0C7I0 530 aa8.45□□□□□ -1.06
TPM4-214ENST00000591645 WDR4P57081 412 aaKnown RBP8.45□□□□□ -1.06
TPM4-214ENST00000591645 SH3BP5LQ7L8J4 393 aa8.45□□□□□ -1.06
TPM4-214ENST00000591645 SH3RF1Q7Z6J0 888 aa8.45□□□□□ -1.06
TPM4-214ENST00000591645 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
TPM4-214ENST00000591645 C1QTNF2Q9BXJ5 285 aa8.45□□□□□ -1.06
TPM4-214ENST00000591645 ERBB4Q15303 1308 aa8.45□□□□□ -1.06
TPM4-214ENST00000591645 H3BM21 787 aa8.44□□□□□ -1.06
TPM4-214ENST00000591645 TMEM259Q4ZIN3 620 aa8.44□□□□□ -1.06
TPM4-214ENST00000591645 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
TPM4-214ENST00000591645 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
TPM4-214ENST00000591645 NPAS3Q8IXF0 933 aa8.44□□□□□ -1.06
TPM4-214ENST00000591645 IRF7Q92985 503 aa8.44□□□□□ -1.06
TPM4-214ENST00000591645 CDK15Q96Q40 435 aa8.44□□□□□ -1.06
TPM4-214ENST00000591645 KLF16Q9BXK1 252 aaPredicted RBP8.44□□□□□ -1.06
TPM4-214ENST00000591645 SOBPA7XYQ1 873 aa8.43□□□□□ -1.06
TPM4-214ENST00000591645 ADH1CP00326 375 aa8.43□□□□□ -1.06
TPM4-214ENST00000591645 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
TPM4-214ENST00000591645 ARID5BQ14865 1188 aa8.43□□□□□ -1.06
TPM4-214ENST00000591645 FKBPLQ9UIM3 349 aa8.43□□□□□ -1.06
TPM4-214ENST00000591645 SCARF1Q14162 830 aa8.42□□□□□ -1.06
TPM4-214ENST00000591645 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
TPM4-214ENST00000591645 PDXDC2PQ6P474 469 aa8.41□□□□□ -1.06
TPM4-214ENST00000591645 MAP4K5Q9Y4K4 846 aa8.41□□□□□ -1.06
TPM4-214ENST00000591645 SOCS7O14512 581 aa8.4□□□□□ -1.06
TPM4-214ENST00000591645 PRKCSHP14314 528 aaPredicted RBP8.4□□□□□ -1.06
TPM4-214ENST00000591645 AGERQ15109 404 aa8.4□□□□□ -1.06
TPM4-214ENST00000591645 NR6A1Q15406 480 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms