RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 ARHGEF10O15013 1369 aa23.17■■□□□ 1.3
GCDH-203ENST00000585420 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
GCDH-203ENST00000585420 ADAMTS2O95450 1211 aa23.16■■□□□ 1.3
GCDH-203ENST00000585420 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
GCDH-203ENST00000585420 POLR3GLQ9BT43 218 aa23.16■■□□□ 1.3
GCDH-203ENST00000585420 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
GCDH-203ENST00000585420 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
GCDH-203ENST00000585420 USP6P35125 1406 aa23.15■■□□□ 1.3
GCDH-203ENST00000585420 RGS17Q9UGC6 210 aaPredicted RBP23.14■■□□□ 1.3
GCDH-203ENST00000585420 CPSF1Q10570 1443 aaKnown RBP23.14■■□□□ 1.29
GCDH-203ENST00000585420 ZNF692Q9BU19 519 aaPredicted RBP23.13■■□□□ 1.29
GCDH-203ENST00000585420 NUTM2GQ5VZR2 741 aa23.13■■□□□ 1.29
GCDH-203ENST00000585420 CD163L1Q9NR16 1453 aa23.12■■□□□ 1.29
GCDH-203ENST00000585420 C8orf37Q96NL8 207 aa23.12■■□□□ 1.29
GCDH-203ENST00000585420 SSH2Q76I76 1423 aa23.11■■□□□ 1.29
GCDH-203ENST00000585420 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
GCDH-203ENST00000585420 CDCA8Q53HL2 280 aa23.1■■□□□ 1.29
GCDH-203ENST00000585420 KTN1Q86UP2 1357 aaKnown RBP23.1■■□□□ 1.29
GCDH-203ENST00000585420 HAP1P54257 671 aaPredicted RBP23.09■■□□□ 1.29
GCDH-203ENST00000585420 AKAP12Q02952 1782 aa23.09■■□□□ 1.29
GCDH-203ENST00000585420 BRD4O60885 1362 aaPredicted RBP23.08■■□□□ 1.29
GCDH-203ENST00000585420 DDX10Q13206 875 aaKnown RBP23.08■■□□□ 1.29
GCDH-203ENST00000585420 A0A1W2PP64 1363 aa23.08■■□□□ 1.28
GCDH-203ENST00000585420 TTC21BQ7Z4L5 1316 aa23.07■■□□□ 1.28
GCDH-203ENST00000585420 NINLQ9Y2I6 1382 aa23.07■■□□□ 1.28
GCDH-203ENST00000585420 HDGFL2Q7Z4V5 671 aaPredicted RBP23.07■■□□□ 1.28
GCDH-203ENST00000585420 NGLY1Q96IV0 654 aa23.06■■□□□ 1.28
GCDH-203ENST00000585420 TERF2IPQ9NYB0 399 aa23.06■■□□□ 1.28
GCDH-203ENST00000585420 AFF2P51816 1311 aa23.05■■□□□ 1.28
GCDH-203ENST00000585420 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
GCDH-203ENST00000585420 MON2Q7Z3U7 1717 aa23.03■■□□□ 1.28
GCDH-203ENST00000585420 DIEXFQ68CQ4 756 aaKnown RBP23.03■■□□□ 1.28
GCDH-203ENST00000585420 POTEAQ6S8J7 498 aa23.03■■□□□ 1.28
GCDH-203ENST00000585420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.03■■□□□ 1.28
GCDH-203ENST00000585420 NRKQ7Z2Y5 1582 aa23.03■■□□□ 1.28
GCDH-203ENST00000585420 NLRP6P59044 892 aa23.02■■□□□ 1.28
GCDH-203ENST00000585420 NLRP13Q86W25 1043 aa23.02■■□□□ 1.28
GCDH-203ENST00000585420 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
GCDH-203ENST00000585420 TTC21AQ8NDW8 1320 aa23.02■■□□□ 1.27
GCDH-203ENST00000585420 PIK3C2AO00443 1686 aa23.01■■□□□ 1.27
GCDH-203ENST00000585420 MARF1Q9Y4F3 1742 aaKnown RBP23.01■■□□□ 1.27
GCDH-203ENST00000585420 ILDR2Q71H61 639 aa23.01■■□□□ 1.27
GCDH-203ENST00000585420 FNBP4Q8N3X1 1017 aaPredicted RBP23.01■■□□□ 1.27
GCDH-203ENST00000585420 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
GCDH-203ENST00000585420 ZNF772Q68DY9 489 aaPredicted RBP23■■□□□ 1.27
GCDH-203ENST00000585420 USP19O94966 1318 aa22.99■■□□□ 1.27
GCDH-203ENST00000585420 EDC4Q6P2E9 1401 aaKnown RBP22.99■■□□□ 1.27
GCDH-203ENST00000585420 FAM83GA6ND36 823 aa22.99■■□□□ 1.27
GCDH-203ENST00000585420 MYOM1P52179 1685 aa22.98■■□□□ 1.27
GCDH-203ENST00000585420 ZRANB1Q9UGI0 708 aa22.98■■□□□ 1.27
GCDH-203ENST00000585420 USP21Q9UK80 565 aa22.98■■□□□ 1.27
GCDH-203ENST00000585420 PHRF1Q9P1Y6 1649 aaKnown RBP22.98■■□□□ 1.27
GCDH-203ENST00000585420 GCP02774 474 aa22.97■■□□□ 1.27
GCDH-203ENST00000585420 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
GCDH-203ENST00000585420 NME9Q86XW9 330 aa22.97■■□□□ 1.27
GCDH-203ENST00000585420 BCL9LQ86UU0 1499 aa22.96■■□□□ 1.27
GCDH-203ENST00000585420 KIAA0232Q92628 1395 aa22.95■■□□□ 1.26
GCDH-203ENST00000585420 SLIT2O94813 1529 aa22.95■■□□□ 1.26
GCDH-203ENST00000585420 QTRT2Q9H974 415 aaKnown RBP22.94■■□□□ 1.26
GCDH-203ENST00000585420 PRDM11Q9NQV5 511 aa22.94■■□□□ 1.26
GCDH-203ENST00000585420 CARD14Q9BXL6 1004 aa22.93■■□□□ 1.26
GCDH-203ENST00000585420 CHRNA2Q15822 529 aa22.92■■□□□ 1.26
GCDH-203ENST00000585420 SLIT3O75094 1523 aa22.92■■□□□ 1.26
GCDH-203ENST00000585420 USP31Q70CQ4 1352 aa22.92■■□□□ 1.26
GCDH-203ENST00000585420 SOX12O15370 315 aa22.91■■□□□ 1.26
GCDH-203ENST00000585420 UNC5CLQ8IV45 518 aa22.91■■□□□ 1.26
GCDH-203ENST00000585420 BTG4Q9NY30 223 aa22.91■■□□□ 1.26
GCDH-203ENST00000585420 PANK3Q9H999 370 aa22.89■■□□□ 1.26
GCDH-203ENST00000585420 TRPC5Q9UL62 973 aaPredicted RBP22.89■■□□□ 1.26
GCDH-203ENST00000585420 PLCH1Q4KWH8 1693 aa22.89■■□□□ 1.25
GCDH-203ENST00000585420 CPDO75976 1380 aa22.88■■□□□ 1.25
GCDH-203ENST00000585420 COL14A1Q05707 1796 aaKnown RBP22.88■■□□□ 1.25
GCDH-203ENST00000585420 FYB1O15117 783 aa22.88■■□□□ 1.25
GCDH-203ENST00000585420 KCNH5Q8NCM2 988 aa22.88■■□□□ 1.25
GCDH-203ENST00000585420 OVOS2A0A0J9YW53 1432 aa22.87■■□□□ 1.25
GCDH-203ENST00000585420 ATRNO75882 1429 aa22.87■■□□□ 1.25
GCDH-203ENST00000585420 RXRBP28702 533 aa22.87■■□□□ 1.25
GCDH-203ENST00000585420 OVOS2Q6IE36 1432 aa22.87■■□□□ 1.25
GCDH-203ENST00000585420 NSD3Q9BZ95 1437 aa22.87■■□□□ 1.25
GCDH-203ENST00000585420 ZBTB7CA1YPR0 619 aa22.86■■□□□ 1.25
GCDH-203ENST00000585420 GGNBP2Q9H3C7 697 aa22.85■■□□□ 1.25
GCDH-203ENST00000585420 NWD2Q9ULI1 1742 aa22.85■■□□□ 1.25
GCDH-203ENST00000585420 USP54Q70EL1 1684 aa22.85■■□□□ 1.25
GCDH-203ENST00000585420 NFAT5O94916 1531 aa22.84■■□□□ 1.25
GCDH-203ENST00000585420 RBM6P78332 1123 aaKnown RBP22.84■■□□□ 1.25
GCDH-203ENST00000585420 ARHGEF25Q86VW2 580 aa22.84■■□□□ 1.25
GCDH-203ENST00000585420 COG3Q96JB2 828 aa22.84■■□□□ 1.25
GCDH-203ENST00000585420 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.84■■□□□ 1.25
GCDH-203ENST00000585420 VPS72Q15906 364 aa22.82■■□□□ 1.24
GCDH-203ENST00000585420 GJD4Q96KN9 370 aaPredicted RBP22.82■■□□□ 1.24
GCDH-203ENST00000585420 CAMTA1Q9Y6Y1 1673 aa22.81■■□□□ 1.24
GCDH-203ENST00000585420 NRAPQ86VF7 1730 aa22.81■■□□□ 1.24
GCDH-203ENST00000585420 LMO7Q8WWI1 1683 aa22.8■■□□□ 1.24
GCDH-203ENST00000585420 FBLN1P23142 703 aa22.8■■□□□ 1.24
GCDH-203ENST00000585420 STRN4Q9NRL3 753 aa22.8■■□□□ 1.24
GCDH-203ENST00000585420 AXIN2Q9Y2T1 843 aa22.8■■□□□ 1.24
GCDH-203ENST00000585420 AATKQ6ZMQ8 1374 aa22.8■■□□□ 1.24
GCDH-203ENST00000585420 CCDC9Q9Y3X0 531 aaKnown RBP22.79■■□□□ 1.24
GCDH-203ENST00000585420 CGNL1Q0VF96 1302 aa22.79■■□□□ 1.24
GCDH-203ENST00000585420 PER1O15534 1290 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms