RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	TERF2IP	Q9NYB0	399 aa		13.82	□□□□□ -0.2
NARF-222	ENST00000583908	USP6	P35125	1406 aa		13.81	□□□□□ -0.2
NARF-222	ENST00000583908	ADAMTS2	O95450	1211 aa		13.81	□□□□□ -0.2
NARF-222	ENST00000583908	C8orf37	Q96NL8	207 aa		13.81	□□□□□ -0.2
NARF-222	ENST00000583908	TESK2	Q96S53	571 aa		13.81	□□□□□ -0.2
NARF-222	ENST00000583908	ALS2	Q96Q42	1657 aa		13.81	□□□□□ -0.2
NARF-222	ENST00000583908	NGLY1	Q96IV0	654 aa		13.8	□□□□□ -0.2
NARF-222	ENST00000583908	KTN1	Q86UP2	1357 aa	Known RBP	13.8	□□□□□ -0.2
NARF-222	ENST00000583908	ABTB2	Q8N961	1025 aa		13.79	□□□□□ -0.2
NARF-222	ENST00000583908	TTC21A	Q8NDW8	1320 aa		13.79	□□□□□ -0.2
NARF-222	ENST00000583908	NLRP13	Q86W25	1043 aa		13.78	□□□□□ -0.2
NARF-222	ENST00000583908	AFF2	P51816	1311 aa		13.77	□□□□□ -0.21
NARF-222	ENST00000583908	AKAP12	Q02952	1782 aa		13.77	□□□□□ -0.21
NARF-222	ENST00000583908	ABCA3	Q99758	1704 aa		13.77	□□□□□ -0.21
NARF-222	ENST00000583908	MARF1	Q9Y4F3	1742 aa	Known RBP	13.76	□□□□□ -0.21
NARF-222	ENST00000583908	CPSF1	Q10570	1443 aa	Known RBP	13.76	□□□□□ -0.21
NARF-222	ENST00000583908	EDC4	Q6P2E9	1401 aa	Known RBP	13.76	□□□□□ -0.21
NARF-222	ENST00000583908	PLEKHG5	O94827	1062 aa		13.76	□□□□□ -0.21
NARF-222	ENST00000583908	MON2	Q7Z3U7	1717 aa		13.76	□□□□□ -0.21
NARF-222	ENST00000583908	ANKRD36B	Q8N2N9	1353 aa		13.75	□□□□□ -0.21
NARF-222	ENST00000583908	USP21	Q9UK80	565 aa		13.75	□□□□□ -0.21
NARF-222	ENST00000583908	HSPA5	P11021	654 aa	Known RBP	13.74	□□□□□ -0.21
NARF-222	ENST00000583908	TRPC5	Q9UL62	973 aa	Predicted RBP	13.74	□□□□□ -0.21
NARF-222	ENST00000583908	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.74	□□□□□ -0.21
NARF-222	ENST00000583908	NRK	Q7Z2Y5	1582 aa		13.74	□□□□□ -0.21
NARF-222	ENST00000583908		A0A1W2PP64	1363 aa		13.73	□□□□□ -0.21
NARF-222	ENST00000583908	TTC21B	Q7Z4L5	1316 aa		13.73	□□□□□ -0.21
NARF-222	ENST00000583908	NLRP6	P59044	892 aa		13.73	□□□□□ -0.21
NARF-222	ENST00000583908	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.73	□□□□□ -0.21
NARF-222	ENST00000583908	KCNH5	Q8NCM2	988 aa		13.73	□□□□□ -0.21
NARF-222	ENST00000583908	CABLES1	Q8TDN4	633 aa		13.73	□□□□□ -0.21
NARF-222	ENST00000583908	SLC12A5	Q9H2X9	1139 aa		13.73	□□□□□ -0.21
NARF-222	ENST00000583908	PRDM11	Q9NQV5	511 aa		13.73	□□□□□ -0.21
NARF-222	ENST00000583908	SSH2	Q76I76	1423 aa		13.73	□□□□□ -0.21
NARF-222	ENST00000583908	USP19	O94966	1318 aa		13.72	□□□□□ -0.21
NARF-222	ENST00000583908	COL14A1	Q05707	1796 aa	Known RBP	13.72	□□□□□ -0.21
NARF-222	ENST00000583908	NWD2	Q9ULI1	1742 aa		13.71	□□□□□ -0.21
NARF-222	ENST00000583908	RXRB	P28702	533 aa		13.71	□□□□□ -0.21
NARF-222	ENST00000583908	NUTM2G	Q5VZR2	741 aa		13.71	□□□□□ -0.21
NARF-222	ENST00000583908	POLR3GL	Q9BT43	218 aa		13.71	□□□□□ -0.21
NARF-222	ENST00000583908	PIK3C2A	O00443	1686 aa		13.71	□□□□□ -0.21
NARF-222	ENST00000583908	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.7	□□□□□ -0.22
NARF-222	ENST00000583908	CRYBG1	Q9Y4K1	1723 aa		13.7	□□□□□ -0.22
NARF-222	ENST00000583908	CD163L1	Q9NR16	1453 aa		13.7	□□□□□ -0.22
NARF-222	ENST00000583908	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
NARF-222	ENST00000583908	RGS17	Q9UGC6	210 aa	Predicted RBP	13.7	□□□□□ -0.22
NARF-222	ENST00000583908	CPD	O75976	1380 aa		13.7	□□□□□ -0.22
NARF-222	ENST00000583908	SLIT3	O75094	1523 aa		13.69	□□□□□ -0.22
NARF-222	ENST00000583908	SLIT2	O94813	1529 aa		13.69	□□□□□ -0.22
NARF-222	ENST00000583908	PLCH1	Q4KWH8	1693 aa		13.69	□□□□□ -0.22
NARF-222	ENST00000583908	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.69	□□□□□ -0.22
NARF-222	ENST00000583908	RBM6	P78332	1123 aa	Known RBP	13.69	□□□□□ -0.22
NARF-222	ENST00000583908	UNC5CL	Q8IV45	518 aa		13.69	□□□□□ -0.22
NARF-222	ENST00000583908	KIAA0232	Q92628	1395 aa		13.69	□□□□□ -0.22
NARF-222	ENST00000583908	GC	P02774	474 aa		13.68	□□□□□ -0.22
NARF-222	ENST00000583908	POTEA	Q6S8J7	498 aa		13.68	□□□□□ -0.22
NARF-222	ENST00000583908	QTRT2	Q9H974	415 aa	Known RBP	13.68	□□□□□ -0.22
NARF-222	ENST00000583908	USP31	Q70CQ4	1352 aa		13.68	□□□□□ -0.22
NARF-222	ENST00000583908	ATRN	O75882	1429 aa		13.67	□□□□□ -0.22
NARF-222	ENST00000583908	ZEB1	P37275	1124 aa	Predicted RBP	13.67	□□□□□ -0.22
NARF-222	ENST00000583908	ZC3H6	P61129	1189 aa	Known RBP	13.67	□□□□□ -0.22
NARF-222	ENST00000583908	CCDC9	Q9Y3X0	531 aa	Known RBP	13.67	□□□□□ -0.22
NARF-222	ENST00000583908	MYOM1	P52179	1685 aa		13.66	□□□□□ -0.22
NARF-222	ENST00000583908	USP54	Q70EL1	1684 aa		13.66	□□□□□ -0.22
NARF-222	ENST00000583908	COG3	Q96JB2	828 aa		13.66	□□□□□ -0.22
NARF-222	ENST00000583908	BTG4	Q9NY30	223 aa		13.66	□□□□□ -0.22
NARF-222	ENST00000583908	BCL9L	Q86UU0	1499 aa		13.66	□□□□□ -0.22
NARF-222	ENST00000583908	ABCC6	O95255	1503 aa		13.65	□□□□□ -0.22
NARF-222	ENST00000583908	FAM83G	A6ND36	823 aa		13.65	□□□□□ -0.22
NARF-222	ENST00000583908	NSD3	Q9BZ95	1437 aa		13.64	□□□□□ -0.23
NARF-222	ENST00000583908	ZBTB7C	A1YPR0	619 aa		13.64	□□□□□ -0.23
NARF-222	ENST00000583908	EVA1C	P58658	441 aa		13.64	□□□□□ -0.23
NARF-222	ENST00000583908	VPS72	Q15906	364 aa		13.64	□□□□□ -0.23
NARF-222	ENST00000583908	NME9	Q86XW9	330 aa		13.64	□□□□□ -0.23
NARF-222	ENST00000583908	OVOS2	A0A0J9YW53	1432 aa		13.64	□□□□□ -0.23
NARF-222	ENST00000583908	OVOS2	Q6IE36	1432 aa		13.64	□□□□□ -0.23
NARF-222	ENST00000583908	CGNL1	Q0VF96	1302 aa		13.64	□□□□□ -0.23
NARF-222	ENST00000583908	SOX12	O15370	315 aa		13.63	□□□□□ -0.23
NARF-222	ENST00000583908	ILDR2	Q71H61	639 aa		13.63	□□□□□ -0.23
NARF-222	ENST00000583908	GJD4	Q96KN9	370 aa	Predicted RBP	13.63	□□□□□ -0.23
NARF-222	ENST00000583908	NRAP	Q86VF7	1730 aa		13.62	□□□□□ -0.23
NARF-222	ENST00000583908	AATK	Q6ZMQ8	1374 aa		13.62	□□□□□ -0.23
NARF-222	ENST00000583908	CHRNA2	Q15822	529 aa		13.62	□□□□□ -0.23
NARF-222	ENST00000583908	NFAT5	O94916	1531 aa		13.61	□□□□□ -0.23
NARF-222	ENST00000583908	STRN4	Q9NRL3	753 aa		13.61	□□□□□ -0.23
NARF-222	ENST00000583908	KIF20B	Q96Q89	1820 aa		13.61	□□□□□ -0.23
NARF-222	ENST00000583908	NSD2	O96028	1365 aa		13.6	□□□□□ -0.23
NARF-222	ENST00000583908		A0A0G2JS52	829 aa		13.6	□□□□□ -0.23
NARF-222	ENST00000583908	SOCS7	O14512	581 aa		13.6	□□□□□ -0.23
NARF-222	ENST00000583908	MYT1	Q01538	1121 aa		13.6	□□□□□ -0.23
NARF-222	ENST00000583908	LMO7	Q8WWI1	1683 aa		13.59	□□□□□ -0.23
NARF-222	ENST00000583908	RGS12	O14924	1447 aa		13.59	□□□□□ -0.23
NARF-222	ENST00000583908	ARHGEF25	Q86VW2	580 aa		13.59	□□□□□ -0.23
NARF-222	ENST00000583908	COL5A2	P05997	1499 aa	Predicted RBP	13.59	□□□□□ -0.23
NARF-222	ENST00000583908	KIF7	Q2M1P5	1343 aa		13.59	□□□□□ -0.23
NARF-222	ENST00000583908	BLM	P54132	1417 aa	Predicted RBP	13.58	□□□□□ -0.24
NARF-222	ENST00000583908	CSB-PGBD3	P0DP91	1061 aa		13.58	□□□□□ -0.24
NARF-222	ENST00000583908	KNSTRN	Q9Y448	316 aa		13.58	□□□□□ -0.24
NARF-222	ENST00000583908	SPATA31A5	Q5VU36	1347 aa		13.58	□□□□□ -0.24
NARF-222	ENST00000583908	SPATA31A7	Q8IWB4	1347 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms