RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 TTC21BQ7Z4L5 1316 aa15.01□□□□□ -0.01
TOP3A-216ENST00000583804 NSD3Q9BZ95 1437 aa15.01□□□□□ -0.01
TOP3A-216ENST00000583804 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
TOP3A-216ENST00000583804 HSPA1LP34931 641 aa15.01□□□□□ -0.01
TOP3A-216ENST00000583804 PXDNQ92626 1479 aa15□□□□□ -0.01
TOP3A-216ENST00000583804 NUTM2GQ5VZR2 741 aa15□□□□□ -0.01
TOP3A-216ENST00000583804 ABTB2Q8N961 1025 aa15□□□□□ -0.01
TOP3A-216ENST00000583804 LRRC59Q96AG4 307 aaKnown RBP15□□□□□ -0.01
TOP3A-216ENST00000583804 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
TOP3A-216ENST00000583804 NHSL1Q5SYE7 1610 aa15□□□□□ -0.01
TOP3A-216ENST00000583804 AHDC1Q5TGY3 1603 aaPredicted RBP15□□□□□ -0.01
TOP3A-216ENST00000583804 AKAP12Q02952 1782 aa15□□□□□ -0.01
TOP3A-216ENST00000583804 SBNO1A3KN83 1393 aa14.99□□□□□ -0.01
TOP3A-216ENST00000583804 BRD4O60885 1362 aaPredicted RBP14.99□□□□□ -0.01
TOP3A-216ENST00000583804 SPATA31A3Q5VYP0 1347 aa14.99□□□□□ -0.01
TOP3A-216ENST00000583804 ILDR2Q71H61 639 aa14.99□□□□□ -0.01
TOP3A-216ENST00000583804 SSH2Q76I76 1423 aa14.98□□□□□ -0.01
TOP3A-216ENST00000583804 TTC21AQ8NDW8 1320 aa14.98□□□□□ -0.01
TOP3A-216ENST00000583804 NME9Q86XW9 330 aa14.98□□□□□ -0.01
TOP3A-216ENST00000583804 PHLPP1O60346 1717 aa14.98□□□□□ -0.01
TOP3A-216ENST00000583804 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
TOP3A-216ENST00000583804 NLRP6P59044 892 aa14.97□□□□□ -0.01
TOP3A-216ENST00000583804 MON2Q7Z3U7 1717 aa14.97□□□□□ -0.01
TOP3A-216ENST00000583804 CGNL1Q0VF96 1302 aa14.96□□□□□ -0.01
TOP3A-216ENST00000583804 MIER1Q8N108 512 aa14.96□□□□□ -0.01
TOP3A-216ENST00000583804 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.01
TOP3A-216ENST00000583804 ZRANB1Q9UGI0 708 aa14.96□□□□□ -0.01
TOP3A-216ENST00000583804 TNS3Q68CZ2 1445 aa14.96□□□□□ -0.01
TOP3A-216ENST00000583804 FYB1O15117 783 aa14.95□□□□□ -0.02
TOP3A-216ENST00000583804 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
TOP3A-216ENST00000583804 COL16A1Q07092 1604 aaPredicted RBP14.94□□□□□ -0.02
TOP3A-216ENST00000583804 ARHGEF10O15013 1369 aa14.94□□□□□ -0.02
TOP3A-216ENST00000583804 TRPM3Q9HCF6 1732 aaPredicted RBP14.94□□□□□ -0.02
TOP3A-216ENST00000583804 SOCS7O14512 581 aa14.94□□□□□ -0.02
TOP3A-216ENST00000583804 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
TOP3A-216ENST00000583804 COG3Q96JB2 828 aa14.94□□□□□ -0.02
TOP3A-216ENST00000583804 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
TOP3A-216ENST00000583804 CABLES1Q8TDN4 633 aa14.93□□□□□ -0.02
TOP3A-216ENST00000583804 NRKQ7Z2Y5 1582 aa14.93□□□□□ -0.02
TOP3A-216ENST00000583804 SOX12O15370 315 aa14.92□□□□□ -0.02
TOP3A-216ENST00000583804 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
TOP3A-216ENST00000583804 JCADQ9P266 1359 aa14.92□□□□□ -0.02
TOP3A-216ENST00000583804 ANP32CO43423 234 aa14.91□□□□□ -0.02
TOP3A-216ENST00000583804 MORC1Q86VD1 984 aa14.91□□□□□ -0.02
TOP3A-216ENST00000583804 PNPLA6Q8IY17 1366 aa14.91□□□□□ -0.02
TOP3A-216ENST00000583804 USP31Q70CQ4 1352 aa14.9□□□□□ -0.02
TOP3A-216ENST00000583804 PIK3C2AO00443 1686 aa14.9□□□□□ -0.02
TOP3A-216ENST00000583804 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
TOP3A-216ENST00000583804 NUTM2BA6NNL0 878 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-216ENST00000583804 NUTM2EB1AL46 878 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-216ENST00000583804 TNNT2P45379 298 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-216ENST00000583804 NUTM2AQ8IVF1 878 aaPredicted RBP14.89□□□□□ -0.03
TOP3A-216ENST00000583804 NSD2O96028 1365 aa14.88□□□□□ -0.03
TOP3A-216ENST00000583804 GCP02774 474 aa14.88□□□□□ -0.03
TOP3A-216ENST00000583804 KIF20BQ96Q89 1820 aa14.87□□□□□ -0.03
TOP3A-216ENST00000583804 NPC1L1Q9UHC9 1359 aa14.87□□□□□ -0.03
TOP3A-216ENST00000583804 ZBTB7CA1YPR0 619 aa14.87□□□□□ -0.03
TOP3A-216ENST00000583804 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
TOP3A-216ENST00000583804 OVOS2A0A0J9YW53 1432 aa14.87□□□□□ -0.03
TOP3A-216ENST00000583804 OVOS2Q6IE36 1432 aa14.87□□□□□ -0.03
TOP3A-216ENST00000583804 USP19O94966 1318 aa14.86□□□□□ -0.03
TOP3A-216ENST00000583804 FBLN1P23142 703 aa14.86□□□□□ -0.03
TOP3A-216ENST00000583804 ZC3H6P61129 1189 aaKnown RBP14.86□□□□□ -0.03
TOP3A-216ENST00000583804 ADAMTS2O95450 1211 aa14.85□□□□□ -0.03
TOP3A-216ENST00000583804 SPATA31A6Q5VVP1 1343 aa14.85□□□□□ -0.03
TOP3A-216ENST00000583804 MED1Q15648 1581 aaPredicted RBP14.84□□□□□ -0.03
TOP3A-216ENST00000583804 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
TOP3A-216ENST00000583804 COL22A1Q8NFW1 1626 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-216ENST00000583804 RRS1Q15050 365 aaKnown RBP14.82□□□□□ -0.04
TOP3A-216ENST00000583804 PPM1GO15355 546 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-216ENST00000583804 RALBP1Q15311 655 aa14.82□□□□□ -0.04
TOP3A-216ENST00000583804 PRKRIP1Q9H875 184 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-216ENST00000583804 PRDM11Q9NQV5 511 aa14.82□□□□□ -0.04
TOP3A-216ENST00000583804 SLIT3O75094 1523 aa14.82□□□□□ -0.04
TOP3A-216ENST00000583804 MARF1Q9Y4F3 1742 aaKnown RBP14.81□□□□□ -0.04
TOP3A-216ENST00000583804 AMPHP49418 695 aa14.81□□□□□ -0.04
TOP3A-216ENST00000583804 CHRNA2Q15822 529 aa14.81□□□□□ -0.04
TOP3A-216ENST00000583804 MEX3CQ5U5Q3 659 aaKnown RBP14.81□□□□□ -0.04
TOP3A-216ENST00000583804 USP54Q70EL1 1684 aa14.8□□□□□ -0.04
TOP3A-216ENST00000583804 KIAA0232Q92628 1395 aa14.8□□□□□ -0.04
TOP3A-216ENST00000583804 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
TOP3A-216ENST00000583804 PHRF1Q9P1Y6 1649 aaKnown RBP14.8□□□□□ -0.04
TOP3A-216ENST00000583804 MAP3K19Q56UN5 1328 aa14.8□□□□□ -0.04
TOP3A-216ENST00000583804 PARD3Q8TEW0 1356 aa14.8□□□□□ -0.04
TOP3A-216ENST00000583804 ARHGEF25Q86VW2 580 aa14.79□□□□□ -0.04
TOP3A-216ENST00000583804 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
TOP3A-216ENST00000583804 EMILIN1Q9Y6C2 1016 aa14.79□□□□□ -0.04
TOP3A-216ENST00000583804 NFAT5O94916 1531 aa14.79□□□□□ -0.04
TOP3A-216ENST00000583804 FAM83GA6ND36 823 aa14.78□□□□□ -0.04
TOP3A-216ENST00000583804 PPP2R1AP30153 589 aa14.78□□□□□ -0.04
TOP3A-216ENST00000583804 CCDC184Q52MB2 194 aa14.78□□□□□ -0.04
TOP3A-216ENST00000583804 AATKQ6ZMQ8 1374 aa14.78□□□□□ -0.04
TOP3A-216ENST00000583804 CRYBG1Q9Y4K1 1723 aa14.78□□□□□ -0.04
TOP3A-216ENST00000583804 MTHFSP49914 203 aa14.77□□□□□ -0.04
TOP3A-216ENST00000583804 NGLY1Q96IV0 654 aa14.77□□□□□ -0.04
TOP3A-216ENST00000583804 C8orf37Q96NL8 207 aa14.77□□□□□ -0.04
TOP3A-216ENST00000583804 CPDO75976 1380 aa14.77□□□□□ -0.04
TOP3A-216ENST00000583804 ABCA3Q99758 1704 aa14.77□□□□□ -0.04
TOP3A-216ENST00000583804 LRP6O75581 1613 aa14.77□□□□□ -0.05
TOP3A-216ENST00000583804 MYBBP1AQ9BQG0 1328 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms