RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 NGDNQ8NEJ9 315 aaKnown RBP28.74■■■□□ 2.19
SNX11-209ENST00000581705 CDK19Q9BWU1 502 aa28.73■■■□□ 2.19
SNX11-209ENST00000581705 ABCA3Q99758 1704 aa28.72■■■□□ 2.19
SNX11-209ENST00000581705 PLEKHG5O94827 1062 aa28.72■■■□□ 2.19
SNX11-209ENST00000581705 ALS2Q96Q42 1657 aa28.71■■■□□ 2.19
SNX11-209ENST00000581705 ITSN1Q15811 1721 aa28.7■■■□□ 2.18
SNX11-209ENST00000581705 ATAD2Q6PL18 1390 aa28.69■■■□□ 2.18
SNX11-209ENST00000581705 CCDC61Q9Y6R9 512 aa28.66■■■□□ 2.18
SNX11-209ENST00000581705 GLI3P10071 1580 aa28.65■■■□□ 2.18
SNX11-209ENST00000581705 FAM83GA6ND36 823 aa28.65■■■□□ 2.18
SNX11-209ENST00000581705 NWD2Q9ULI1 1742 aa28.65■■■□□ 2.18
SNX11-209ENST00000581705 CENPJQ9HC77 1338 aaPredicted RBP28.64■■■□□ 2.18
SNX11-209ENST00000581705 PAK3O75914 559 aaPredicted RBP28.64■■■□□ 2.18
SNX11-209ENST00000581705 VPS72Q15906 364 aa28.64■■■□□ 2.18
SNX11-209ENST00000581705 PLCH1Q4KWH8 1693 aa28.64■■■□□ 2.18
SNX11-209ENST00000581705 POLR3AO14802 1390 aaPredicted RBP28.62■■■□□ 2.17
SNX11-209ENST00000581705 TOPAZ1Q8N9V7 1692 aa28.62■■■□□ 2.17
SNX11-209ENST00000581705 PLEKHG3A1L390 1219 aa28.61■■■□□ 2.17
SNX11-209ENST00000581705 ACEP12821 1306 aa28.6■■■□□ 2.17
SNX11-209ENST00000581705 EP400Q96L91 3159 aa28.6■■■□□ 2.17
SNX11-209ENST00000581705 SLC24A1O60721 1099 aa28.59■■■□□ 2.17
SNX11-209ENST00000581705 CRYBG1Q9Y4K1 1723 aa28.58■■■□□ 2.17
SNX11-209ENST00000581705 ST20-MTHFSA0A0A6YYL1 179 aa28.57■■■□□ 2.16
SNX11-209ENST00000581705 SRPK2P78362 688 aaKnown RBP28.57■■■□□ 2.16
SNX11-209ENST00000581705 BTG4Q9NY30 223 aa28.55■■■□□ 2.16
SNX11-209ENST00000581705 COL14A1Q05707 1796 aaKnown RBP28.55■■■□□ 2.16
SNX11-209ENST00000581705 QRICH2Q9H0J4 1663 aa28.54■■■□□ 2.16
SNX11-209ENST00000581705 ONECUT3O60422 494 aaPredicted RBP28.54■■■□□ 2.16
SNX11-209ENST00000581705 CCDC9Q9Y3X0 531 aaKnown RBP28.54■■■□□ 2.16
SNX11-209ENST00000581705 CABP2Q9NPB3 220 aa28.53■■■□□ 2.16
SNX11-209ENST00000581705 NRAPQ86VF7 1730 aa28.53■■■□□ 2.16
SNX11-209ENST00000581705 SEPT12Q8IYM1 358 aa28.52■■■□□ 2.16
SNX11-209ENST00000581705 PPIP5K1Q6PFW1 1433 aa28.52■■■□□ 2.16
SNX11-209ENST00000581705 DIEXFQ68CQ4 756 aaKnown RBP28.52■■■□□ 2.16
SNX11-209ENST00000581705 SBNO2Q9Y2G9 1366 aa28.51■■■□□ 2.15
SNX11-209ENST00000581705 PRDM11Q9NQV5 511 aa28.51■■■□□ 2.15
SNX11-209ENST00000581705 CCDC7Q96M83 1385 aa28.5■■■□□ 2.15
SNX11-209ENST00000581705 CCDC125Q86Z20 511 aa28.5■■■□□ 2.15
SNX11-209ENST00000581705 WASHC2AQ641Q2 1341 aa28.48■■■□□ 2.15
SNX11-209ENST00000581705 NUTM2GQ5VZR2 741 aa28.48■■■□□ 2.15
SNX11-209ENST00000581705 TESK2Q96S53 571 aa28.48■■■□□ 2.15
SNX11-209ENST00000581705 BRWD3Q6RI45 1802 aa28.47■■■□□ 2.15
SNX11-209ENST00000581705 PHRF1Q9P1Y6 1649 aaKnown RBP28.47■■■□□ 2.15
SNX11-209ENST00000581705 KIAA0232Q92628 1395 aa28.47■■■□□ 2.15
SNX11-209ENST00000581705 ABTB2Q8N961 1025 aa28.45■■■□□ 2.15
SNX11-209ENST00000581705 EVC2Q86UK5 1308 aa28.45■■■□□ 2.14
SNX11-209ENST00000581705 BRD4O60885 1362 aaPredicted RBP28.44■■■□□ 2.14
SNX11-209ENST00000581705 KIF7Q2M1P5 1343 aa28.44■■■□□ 2.14
SNX11-209ENST00000581705 CABP1Q9NZU7 370 aa28.43■■■□□ 2.14
SNX11-209ENST00000581705 SPATA31A5Q5VU36 1347 aa28.43■■■□□ 2.14
SNX11-209ENST00000581705 SPATA31A7Q8IWB4 1347 aa28.43■■■□□ 2.14
SNX11-209ENST00000581705 TMF1P82094 1093 aa28.43■■■□□ 2.14
SNX11-209ENST00000581705 USP19O94966 1318 aa28.42■■■□□ 2.14
SNX11-209ENST00000581705 C11orf95C9JLR9 678 aaPredicted RBP28.42■■■□□ 2.14
SNX11-209ENST00000581705 ZC3H6P61129 1189 aaKnown RBP28.42■■■□□ 2.14
SNX11-209ENST00000581705 FAM98CQ17RN3 349 aaKnown RBP28.42■■■□□ 2.14
SNX11-209ENST00000581705 KRT27Q7Z3Y8 459 aa28.42■■■□□ 2.14
SNX11-209ENST00000581705 CHRNA2Q15822 529 aa28.41■■■□□ 2.14
SNX11-209ENST00000581705 CDCA8Q53HL2 280 aa28.41■■■□□ 2.14
SNX11-209ENST00000581705 BLMP54132 1417 aaPredicted RBP28.4■■■□□ 2.14
SNX11-209ENST00000581705 USP6P35125 1406 aa28.4■■■□□ 2.14
SNX11-209ENST00000581705 NLRP13Q86W25 1043 aa28.39■■■□□ 2.14
SNX11-209ENST00000581705 NRKQ7Z2Y5 1582 aa28.39■■■□□ 2.13
SNX11-209ENST00000581705 A0A0G2JS52 829 aa28.38■■■□□ 2.13
SNX11-209ENST00000581705 MYT1Q01538 1121 aa28.38■■■□□ 2.13
SNX11-209ENST00000581705 CPDO75976 1380 aa28.37■■■□□ 2.13
SNX11-209ENST00000581705 SSH2Q76I76 1423 aa28.35■■■□□ 2.13
SNX11-209ENST00000581705 GCP02774 474 aa28.35■■■□□ 2.13
SNX11-209ENST00000581705 DDX10Q13206 875 aaKnown RBP28.35■■■□□ 2.13
SNX11-209ENST00000581705 SPATA31A1Q5TZJ5 1347 aa28.34■■■□□ 2.13
SNX11-209ENST00000581705 STRN4Q9NRL3 753 aa28.34■■■□□ 2.13
SNX11-209ENST00000581705 THSD7AQ9UPZ6 1657 aa28.31■■■□□ 2.12
SNX11-209ENST00000581705 PUS7Q96PZ0 661 aaKnown RBP28.31■■■□□ 2.12
SNX11-209ENST00000581705 CAMTA1Q9Y6Y1 1673 aa28.31■■■□□ 2.12
SNX11-209ENST00000581705 NLRP6P59044 892 aa28.3■■■□□ 2.12
SNX11-209ENST00000581705 ZNF692Q9BU19 519 aaPredicted RBP28.3■■■□□ 2.12
SNX11-209ENST00000581705 EVA1CP58658 441 aa28.29■■■□□ 2.12
SNX11-209ENST00000581705 LMO7Q8WWI1 1683 aa28.29■■■□□ 2.12
SNX11-209ENST00000581705 SF3B2Q13435 895 aaKnown RBP28.28■■■□□ 2.12
SNX11-209ENST00000581705 ZRANB1Q9UGI0 708 aa28.28■■■□□ 2.12
SNX11-209ENST00000581705 SLIT3O75094 1523 aa28.27■■■□□ 2.12
SNX11-209ENST00000581705 DEFB132Q7Z7B7 95 aa28.26■■■□□ 2.12
SNX11-209ENST00000581705 CPSF1Q10570 1443 aaKnown RBP28.25■■■□□ 2.11
SNX11-209ENST00000581705 PIK3C2AO00443 1686 aa28.25■■■□□ 2.11
SNX11-209ENST00000581705 TTC21BQ7Z4L5 1316 aa28.25■■■□□ 2.11
SNX11-209ENST00000581705 SRCAPQ6ZRS2 3230 aa28.24■■■□□ 2.11
SNX11-209ENST00000581705 LARP1Q6PKG0 1096 aaKnown RBP28.24■■■□□ 2.11
SNX11-209ENST00000581705 AKAP12Q02952 1782 aa28.23■■■□□ 2.11
SNX11-209ENST00000581705 BARGINQ6ZT62 677 aa28.23■■■□□ 2.11
SNX11-209ENST00000581705 USP35Q9P2H5 1018 aa28.23■■■□□ 2.11
SNX11-209ENST00000581705 COL5A2P05997 1499 aaPredicted RBP28.21■■■□□ 2.11
SNX11-209ENST00000581705 TTC21AQ8NDW8 1320 aa28.21■■■□□ 2.11
SNX11-209ENST00000581705 FAM182BQ5T319 152 aa28.21■■■□□ 2.11
SNX11-209ENST00000581705 AATKQ6ZMQ8 1374 aa28.21■■■□□ 2.11
SNX11-209ENST00000581705 TCP11L2Q8N4U5 519 aa28.19■■■□□ 2.1
SNX11-209ENST00000581705 KTN1Q86UP2 1357 aaKnown RBP28.19■■■□□ 2.1
SNX11-209ENST00000581705 ZBTB7CA1YPR0 619 aa28.17■■■□□ 2.1
SNX11-209ENST00000581705 BAG6P46379 1132 aa28.17■■■□□ 2.1
SNX11-209ENST00000581705 POLR3GLQ9BT43 218 aa28.17■■■□□ 2.1
SNX11-209ENST00000581705 THRAP3Q9Y2W1 955 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms