RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 SPATA31A5Q5VU36 1347 aa16.05■□□□□ 0.16
TOP3A-210ENST00000580713 SPATA31A7Q8IWB4 1347 aa16.05■□□□□ 0.16
TOP3A-210ENST00000580713 APBA3O96018 575 aa16.05■□□□□ 0.16
TOP3A-210ENST00000580713 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
TOP3A-210ENST00000580713 PPP1R1BQ9UD71 204 aaPredicted RBP16.05■□□□□ 0.16
TOP3A-210ENST00000580713 DISP2A7MBM2 1401 aa16.04■□□□□ 0.16
TOP3A-210ENST00000580713 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
TOP3A-210ENST00000580713 RGPD8O14715 1765 aaPredicted RBP16.04■□□□□ 0.16
TOP3A-210ENST00000580713 KNDC1Q76NI1 1749 aa16.03■□□□□ 0.16
TOP3A-210ENST00000580713 ABCA3Q99758 1704 aa16.03■□□□□ 0.16
TOP3A-210ENST00000580713 FAM196AQ6ZSG2 479 aa16.03■□□□□ 0.16
TOP3A-210ENST00000580713 NBPF8Q3BBV2 869 aa16.02■□□□□ 0.16
TOP3A-210ENST00000580713 NBPF14Q5TI25 921 aa16.02■□□□□ 0.16
TOP3A-210ENST00000580713 PRAM1Q96QH2 718 aa16.02■□□□□ 0.16
TOP3A-210ENST00000580713 PRDM11Q9NQV5 511 aa16.02■□□□□ 0.16
TOP3A-210ENST00000580713 NRAPQ86VF7 1730 aa16.02■□□□□ 0.15
TOP3A-210ENST00000580713 GPRASP1Q5JY77 1395 aa16.01■□□□□ 0.15
TOP3A-210ENST00000580713 POGKQ9P215 609 aa16.01■□□□□ 0.15
TOP3A-210ENST00000580713 IFT172Q9UG01 1749 aa16.01■□□□□ 0.15
TOP3A-210ENST00000580713 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
TOP3A-210ENST00000580713 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
TOP3A-210ENST00000580713 COL14A1Q05707 1796 aaKnown RBP16■□□□□ 0.15
TOP3A-210ENST00000580713 ADGRB2O60241 1585 aa16■□□□□ 0.15
TOP3A-210ENST00000580713 STRN4Q9NRL3 753 aa15.99■□□□□ 0.15
TOP3A-210ENST00000580713 PIK3C2GO75747 1445 aa15.99■□□□□ 0.15
TOP3A-210ENST00000580713 TNS1Q9HBL0 1735 aaKnown RBP15.99■□□□□ 0.15
TOP3A-210ENST00000580713 PARD3Q8TEW0 1356 aa15.99■□□□□ 0.15
TOP3A-210ENST00000580713 CFAP70Q5T0N1 1121 aa15.98■□□□□ 0.15
TOP3A-210ENST00000580713 SPATA31E1Q6ZUB1 1445 aa15.98■□□□□ 0.15
TOP3A-210ENST00000580713 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
TOP3A-210ENST00000580713 SPON1Q9HCB6 807 aa15.98■□□□□ 0.15
TOP3A-210ENST00000580713 PDE3BQ13370 1112 aa15.97■□□□□ 0.15
TOP3A-210ENST00000580713 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
TOP3A-210ENST00000580713 SPATA31A1Q5TZJ5 1347 aa15.96■□□□□ 0.15
TOP3A-210ENST00000580713 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
TOP3A-210ENST00000580713 ANKARQ7Z5J8 1434 aa15.96■□□□□ 0.15
TOP3A-210ENST00000580713 CHRNA2Q15822 529 aa15.96■□□□□ 0.15
TOP3A-210ENST00000580713 NGDNQ8NEJ9 315 aaKnown RBP15.96■□□□□ 0.15
TOP3A-210ENST00000580713 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.15
TOP3A-210ENST00000580713 THSD7AQ9UPZ6 1657 aa15.95■□□□□ 0.14
TOP3A-210ENST00000580713 KCNQ2O43526 872 aa15.95■□□□□ 0.14
TOP3A-210ENST00000580713 EVA1CP58658 441 aa15.94■□□□□ 0.14
TOP3A-210ENST00000580713 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
TOP3A-210ENST00000580713 MINK1Q8N4C8 1332 aaPredicted RBP15.93■□□□□ 0.14
TOP3A-210ENST00000580713 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
TOP3A-210ENST00000580713 NINLQ9Y2I6 1382 aa15.92■□□□□ 0.14
TOP3A-210ENST00000580713 ZC3H6P61129 1189 aaKnown RBP15.92■□□□□ 0.14
TOP3A-210ENST00000580713 TRPM3Q9HCF6 1732 aaPredicted RBP15.91■□□□□ 0.14
TOP3A-210ENST00000580713 EIF3AQ14152 1382 aaKnown RBP15.9■□□□□ 0.14
TOP3A-210ENST00000580713 ALS2Q96Q42 1657 aa15.9■□□□□ 0.14
TOP3A-210ENST00000580713 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
TOP3A-210ENST00000580713 TRAK1Q9UPV9 953 aa15.9■□□□□ 0.14
TOP3A-210ENST00000580713 PRR36Q9H6K5 1346 aa15.9■□□□□ 0.14
TOP3A-210ENST00000580713 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
TOP3A-210ENST00000580713 BARGINQ6ZT62 677 aa15.88■□□□□ 0.13
TOP3A-210ENST00000580713 RREB1Q92766 1687 aa15.87■□□□□ 0.13
TOP3A-210ENST00000580713 WASLO00401 505 aaPredicted RBP15.87■□□□□ 0.13
TOP3A-210ENST00000580713 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
TOP3A-210ENST00000580713 NUP188Q5SRE5 1749 aa15.87■□□□□ 0.13
TOP3A-210ENST00000580713 DLC1Q96QB1 1528 aa15.86■□□□□ 0.13
TOP3A-210ENST00000580713 TCP11L2Q8N4U5 519 aa15.86■□□□□ 0.13
TOP3A-210ENST00000580713 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
TOP3A-210ENST00000580713 LARP1Q6PKG0 1096 aaKnown RBP15.85■□□□□ 0.13
TOP3A-210ENST00000580713 ZNF784Q8NCA9 323 aaPredicted RBP15.85■□□□□ 0.13
TOP3A-210ENST00000580713 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
TOP3A-210ENST00000580713 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
TOP3A-210ENST00000580713 CRYBG1Q9Y4K1 1723 aa15.82■□□□□ 0.12
TOP3A-210ENST00000580713 C11orf95C9JLR9 678 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-210ENST00000580713 CAMTA1Q9Y6Y1 1673 aa15.82■□□□□ 0.12
TOP3A-210ENST00000580713 ZBTB7AO95365 584 aa15.81■□□□□ 0.12
TOP3A-210ENST00000580713 NUDT16Q96DE0 195 aaKnown RBP15.81■□□□□ 0.12
TOP3A-210ENST00000580713 BCL11BQ9C0K0 894 aaPredicted RBP15.81■□□□□ 0.12
TOP3A-210ENST00000580713 THRAP3Q9Y2W1 955 aaKnown RBP15.81■□□□□ 0.12
TOP3A-210ENST00000580713 ANO8Q9HCE9 1232 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-210ENST00000580713 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
TOP3A-210ENST00000580713 KDM2AQ9Y2K7 1162 aa15.79■□□□□ 0.12
TOP3A-210ENST00000580713 ATP7BP35670 1465 aa15.78■□□□□ 0.12
TOP3A-210ENST00000580713 ZBTB7CA1YPR0 619 aa15.78■□□□□ 0.12
TOP3A-210ENST00000580713 PLSCR1O15162 318 aa15.78■□□□□ 0.12
TOP3A-210ENST00000580713 ABTB2Q8N961 1025 aa15.78■□□□□ 0.12
TOP3A-210ENST00000580713 PDGFDQ9GZP0 370 aaPredicted RBP15.78■□□□□ 0.12
TOP3A-210ENST00000580713 PHRF1Q9P1Y6 1649 aaKnown RBP15.78■□□□□ 0.12
TOP3A-210ENST00000580713 CAPN15O75808 1086 aa15.77■□□□□ 0.12
TOP3A-210ENST00000580713 C1QTNF8P60827 252 aa15.77■□□□□ 0.12
TOP3A-210ENST00000580713 NRKQ7Z2Y5 1582 aa15.77■□□□□ 0.11
TOP3A-210ENST00000580713 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.11
TOP3A-210ENST00000580713 OVOS2A0A0J9YW53 1432 aa15.77■□□□□ 0.11
TOP3A-210ENST00000580713 OVOS2Q6IE36 1432 aa15.77■□□□□ 0.11
TOP3A-210ENST00000580713 ACEP12821 1306 aa15.76■□□□□ 0.11
TOP3A-210ENST00000580713 ADGRB1O14514 1584 aa15.76■□□□□ 0.11
TOP3A-210ENST00000580713 DDB1Q16531 1140 aa15.75■□□□□ 0.11
TOP3A-210ENST00000580713 FHDC1Q9C0D6 1143 aaPredicted RBP15.75■□□□□ 0.11
TOP3A-210ENST00000580713 PTGER2P43116 358 aa15.74■□□□□ 0.11
TOP3A-210ENST00000580713 IFFO2Q5TF58 517 aa15.74■□□□□ 0.11
TOP3A-210ENST00000580713 SYT17Q9BSW7 474 aa15.74■□□□□ 0.11
TOP3A-210ENST00000580713 CDK19Q9BWU1 502 aa15.74■□□□□ 0.11
TOP3A-210ENST00000580713 STK32BQ9NY57 414 aa15.74■□□□□ 0.11
TOP3A-210ENST00000580713 CPDO75976 1380 aa15.74■□□□□ 0.11
TOP3A-210ENST00000580713 GCP02774 474 aa15.73■□□□□ 0.11
TOP3A-210ENST00000580713 PTF1AQ7RTS3 328 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms