RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 NUDT16Q96DE0 195 aaKnown RBP26.04■■□□□ 1.76
MKS1-209ENST00000580127 PRDM11Q9NQV5 511 aa26.04■■□□□ 1.76
MKS1-209ENST00000580127 PRR36Q9H6K5 1346 aa26.04■■□□□ 1.76
MKS1-209ENST00000580127 ABCA3Q99758 1704 aa26.02■■□□□ 1.76
MKS1-209ENST00000580127 COL14A1Q05707 1796 aaKnown RBP26■■□□□ 1.75
MKS1-209ENST00000580127 TRPM3Q9HCF6 1732 aaPredicted RBP26■■□□□ 1.75
MKS1-209ENST00000580127 CDK19Q9BWU1 502 aa25.99■■□□□ 1.75
MKS1-209ENST00000580127 SPATA31A5Q5VU36 1347 aa25.98■■□□□ 1.75
MKS1-209ENST00000580127 SPATA31A7Q8IWB4 1347 aa25.98■■□□□ 1.75
MKS1-209ENST00000580127 ALS2Q96Q42 1657 aa25.98■■□□□ 1.75
MKS1-209ENST00000580127 CCDC61Q9Y6R9 512 aa25.97■■□□□ 1.75
MKS1-209ENST00000580127 ITSN1Q15811 1721 aa25.95■■□□□ 1.74
MKS1-209ENST00000580127 EVA1CP58658 441 aa25.94■■□□□ 1.74
MKS1-209ENST00000580127 SRCAPQ6ZRS2 3230 aa25.93■■□□□ 1.74
MKS1-209ENST00000580127 NBPF8Q3BBV2 869 aa25.92■■□□□ 1.74
MKS1-209ENST00000580127 NRAPQ86VF7 1730 aa25.91■■□□□ 1.74
MKS1-209ENST00000580127 ACEP12821 1306 aa25.9■■□□□ 1.74
MKS1-209ENST00000580127 PLEKHG3A1L390 1219 aa25.9■■□□□ 1.74
MKS1-209ENST00000580127 STRN4Q9NRL3 753 aa25.9■■□□□ 1.74
MKS1-209ENST00000580127 ARHGEF28Q8N1W1 1705 aaKnown RBP25.89■■□□□ 1.74
MKS1-209ENST00000580127 ZC3H6P61129 1189 aaKnown RBP25.89■■□□□ 1.74
MKS1-209ENST00000580127 ABTB2Q8N961 1025 aa25.89■■□□□ 1.74
MKS1-209ENST00000580127 KIAA0232Q92628 1395 aa25.89■■□□□ 1.74
MKS1-209ENST00000580127 ATP7BP35670 1465 aa25.89■■□□□ 1.73
MKS1-209ENST00000580127 NUTM2GQ5VZR2 741 aa25.88■■□□□ 1.73
MKS1-209ENST00000580127 FAM196AQ6ZSG2 479 aa25.88■■□□□ 1.73
MKS1-209ENST00000580127 SPATA31A1Q5TZJ5 1347 aa25.88■■□□□ 1.73
MKS1-209ENST00000580127 CHRNA2Q15822 529 aa25.87■■□□□ 1.73
MKS1-209ENST00000580127 POLR3AO14802 1390 aaPredicted RBP25.86■■□□□ 1.73
MKS1-209ENST00000580127 SRPK2P78362 688 aaKnown RBP25.86■■□□□ 1.73
MKS1-209ENST00000580127 EN1Q05925 392 aaPredicted RBP25.86■■□□□ 1.73
MKS1-209ENST00000580127 NLRP13Q86W25 1043 aa25.85■■□□□ 1.73
MKS1-209ENST00000580127 PDE3BQ13370 1112 aa25.84■■□□□ 1.73
MKS1-209ENST00000580127 FAM182BQ5T319 152 aa25.84■■□□□ 1.73
MKS1-209ENST00000580127 KIAA1210Q9ULL0 1709 aa25.83■■□□□ 1.73
MKS1-209ENST00000580127 RGPD1P0DJD0 1748 aa25.83■■□□□ 1.72
MKS1-209ENST00000580127 PSDA5PKW4 1024 aaPredicted RBP25.82■■□□□ 1.72
MKS1-209ENST00000580127 USP35Q9P2H5 1018 aa25.82■■□□□ 1.72
MKS1-209ENST00000580127 CRYBG1Q9Y4K1 1723 aa25.81■■□□□ 1.72
MKS1-209ENST00000580127 NBPF1Q3BBV0 1214 aa25.8■■□□□ 1.72
MKS1-209ENST00000580127 BARGINQ6ZT62 677 aa25.8■■□□□ 1.72
MKS1-209ENST00000580127 CENPJQ9HC77 1338 aaPredicted RBP25.8■■□□□ 1.72
MKS1-209ENST00000580127 BRD4O60885 1362 aaPredicted RBP25.79■■□□□ 1.72
MKS1-209ENST00000580127 TRIM37O94972 964 aa25.78■■□□□ 1.72
MKS1-209ENST00000580127 C11orf95C9JLR9 678 aaPredicted RBP25.77■■□□□ 1.72
MKS1-209ENST00000580127 TCP11L2Q8N4U5 519 aa25.77■■□□□ 1.72
MKS1-209ENST00000580127 THRAP3Q9Y2W1 955 aaKnown RBP25.77■■□□□ 1.72
MKS1-209ENST00000580127 THSD7AQ9UPZ6 1657 aa25.77■■□□□ 1.72
MKS1-209ENST00000580127 APBA3O96018 575 aa25.76■■□□□ 1.71
MKS1-209ENST00000580127 GCP02774 474 aa25.76■■□□□ 1.71
MKS1-209ENST00000580127 PHRF1Q9P1Y6 1649 aaKnown RBP25.75■■□□□ 1.71
MKS1-209ENST00000580127 DISP2A7MBM2 1401 aa25.75■■□□□ 1.71
MKS1-209ENST00000580127 CPDO75976 1380 aa25.75■■□□□ 1.71
MKS1-209ENST00000580127 PPIP5K1Q6PFW1 1433 aa25.74■■□□□ 1.71
MKS1-209ENST00000580127 R3HDM1Q15032 1099 aaKnown RBP25.74■■□□□ 1.71
MKS1-209ENST00000580127 CABP2Q9NPB3 220 aa25.74■■□□□ 1.71
MKS1-209ENST00000580127 LRP5O75197 1615 aa25.74■■□□□ 1.71
MKS1-209ENST00000580127 SSH2Q76I76 1423 aa25.73■■□□□ 1.71
MKS1-209ENST00000580127 EZH2Q15910 746 aaKnown RBP25.73■■□□□ 1.71
MKS1-209ENST00000580127 LARP1Q6PKG0 1096 aaKnown RBP25.73■■□□□ 1.71
MKS1-209ENST00000580127 PARD3Q8TEW0 1356 aa25.72■■□□□ 1.71
MKS1-209ENST00000580127 TOPAZ1Q8N9V7 1692 aa25.72■■□□□ 1.71
MKS1-209ENST00000580127 USP19O94966 1318 aa25.71■■□□□ 1.71
MKS1-209ENST00000580127 NLRP6P59044 892 aa25.71■■□□□ 1.71
MKS1-209ENST00000580127 NBPF14Q5TI25 921 aa25.71■■□□□ 1.71
MKS1-209ENST00000580127 CAMKK2Q96RR4 588 aa25.71■■□□□ 1.71
MKS1-209ENST00000580127 CABP1Q9NZU7 370 aa25.7■■□□□ 1.7
MKS1-209ENST00000580127 EVC2Q86UK5 1308 aa25.69■■□□□ 1.7
MKS1-209ENST00000580127 ZBTB7CA1YPR0 619 aa25.68■■□□□ 1.7
MKS1-209ENST00000580127 CAMTA1Q9Y6Y1 1673 aa25.68■■□□□ 1.7
MKS1-209ENST00000580127 ZNF692Q9BU19 519 aaPredicted RBP25.67■■□□□ 1.7
MKS1-209ENST00000580127 L3MBTL2Q969R5 705 aa25.65■■□□□ 1.7
MKS1-209ENST00000580127 TNS1Q9HBL0 1735 aaKnown RBP25.64■■□□□ 1.7
MKS1-209ENST00000580127 NRKQ7Z2Y5 1582 aa25.64■■□□□ 1.69
MKS1-209ENST00000580127 AATKQ6ZMQ8 1374 aa25.62■■□□□ 1.69
MKS1-209ENST00000580127 TOM1L2Q6ZVM7 507 aa25.61■■□□□ 1.69
MKS1-209ENST00000580127 USP6P35125 1406 aa25.61■■□□□ 1.69
MKS1-209ENST00000580127 CRB1P82279 1406 aa25.61■■□□□ 1.69
MKS1-209ENST00000580127 KCNH5Q8NCM2 988 aa25.6■■□□□ 1.69
MKS1-209ENST00000580127 QRICH2Q9H0J4 1663 aa25.6■■□□□ 1.69
MKS1-209ENST00000580127 LMO7Q8WWI1 1683 aa25.59■■□□□ 1.69
MKS1-209ENST00000580127 CDCA7Q9BWT1 371 aaPredicted RBP25.59■■□□□ 1.69
MKS1-209ENST00000580127 DDB1Q16531 1140 aa25.58■■□□□ 1.69
MKS1-209ENST00000580127 COL5A2P05997 1499 aaPredicted RBP25.58■■□□□ 1.69
MKS1-209ENST00000580127 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
MKS1-209ENST00000580127 ROCK2O75116 1388 aaKnown RBP25.55■■□□□ 1.68
MKS1-209ENST00000580127 CSB-PGBD3P0DP91 1061 aa25.53■■□□□ 1.68
MKS1-209ENST00000580127 TTC21BQ7Z4L5 1316 aa25.53■■□□□ 1.68
MKS1-209ENST00000580127 TTC21AQ8NDW8 1320 aa25.53■■□□□ 1.68
MKS1-209ENST00000580127 OVOS2A0A0G2JMS6 1433 aa25.53■■□□□ 1.68
MKS1-209ENST00000580127 OVOS2A0A0J9YW53 1432 aa25.53■■□□□ 1.68
MKS1-209ENST00000580127 OVOS2Q6IE36 1432 aa25.53■■□□□ 1.68
MKS1-209ENST00000580127 PARP4Q9UKK3 1724 aaKnown RBP25.52■■□□□ 1.68
MKS1-209ENST00000580127 DCAF8L1A6NGE4 600 aa25.52■■□□□ 1.68
MKS1-209ENST00000580127 SIN3AQ96ST3 1273 aa25.52■■□□□ 1.68
MKS1-209ENST00000580127 WDR17Q8IZU2 1322 aa25.52■■□□□ 1.68
MKS1-209ENST00000580127 PLSCR1O15162 318 aa25.51■■□□□ 1.67
MKS1-209ENST00000580127 SLIT3O75094 1523 aa25.5■■□□□ 1.67
MKS1-209ENST00000580127 ARHGEF25Q86VW2 580 aa25.5■■□□□ 1.67
MKS1-209ENST00000580127 BCL11BQ9C0K0 894 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms