RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
ERBB2-208ENST00000578630 NLRP13Q86W25 1043 aa15.99■□□□□ 0.15
ERBB2-208ENST00000578630 KTN1Q86UP2 1357 aaKnown RBP15.99■□□□□ 0.15
ERBB2-208ENST00000578630 ADAMTS2O95450 1211 aa15.98■□□□□ 0.15
ERBB2-208ENST00000578630 CABLES1Q8TDN4 633 aa15.97■□□□□ 0.15
ERBB2-208ENST00000578630 TTC21BQ7Z4L5 1316 aa15.96■□□□□ 0.15
ERBB2-208ENST00000578630 TTC21AQ8NDW8 1320 aa15.96■□□□□ 0.15
ERBB2-208ENST00000578630 USP6P35125 1406 aa15.96■□□□□ 0.15
ERBB2-208ENST00000578630 CPSF1Q10570 1443 aaKnown RBP15.96■□□□□ 0.15
ERBB2-208ENST00000578630 NLRP6P59044 892 aa15.96■□□□□ 0.15
ERBB2-208ENST00000578630 NUTM2GQ5VZR2 741 aa15.96■□□□□ 0.15
ERBB2-208ENST00000578630 NGLY1Q96IV0 654 aa15.96■□□□□ 0.15
ERBB2-208ENST00000578630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.95■□□□□ 0.14
ERBB2-208ENST00000578630 C8orf37Q96NL8 207 aa15.95■□□□□ 0.14
ERBB2-208ENST00000578630 SHPRHQ149N8 1683 aa15.95■□□□□ 0.14
ERBB2-208ENST00000578630 TOPAZ1Q8N9V7 1692 aa15.94■□□□□ 0.14
ERBB2-208ENST00000578630 ANKRD36BQ8N2N9 1353 aa15.93■□□□□ 0.14
ERBB2-208ENST00000578630 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
ERBB2-208ENST00000578630 ZNF772Q68DY9 489 aaPredicted RBP15.92■□□□□ 0.14
ERBB2-208ENST00000578630 SSH2Q76I76 1423 aa15.92■□□□□ 0.14
ERBB2-208ENST00000578630 A0A1W2PP64 1363 aa15.91■□□□□ 0.14
ERBB2-208ENST00000578630 GCP02774 474 aa15.9■□□□□ 0.14
ERBB2-208ENST00000578630 KCNH5Q8NCM2 988 aa15.9■□□□□ 0.14
ERBB2-208ENST00000578630 MED1Q15648 1581 aaPredicted RBP15.9■□□□□ 0.14
ERBB2-208ENST00000578630 CD163L1Q9NR16 1453 aa15.9■□□□□ 0.14
ERBB2-208ENST00000578630 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
ERBB2-208ENST00000578630 PANK3Q9H999 370 aa15.89■□□□□ 0.13
ERBB2-208ENST00000578630 LRP6O75581 1613 aa15.89■□□□□ 0.13
ERBB2-208ENST00000578630 KIF7Q2M1P5 1343 aa15.89■□□□□ 0.13
ERBB2-208ENST00000578630 TRPM3Q9HCF6 1732 aaPredicted RBP15.88■□□□□ 0.13
ERBB2-208ENST00000578630 COL22A1Q8NFW1 1626 aaPredicted RBP15.88■□□□□ 0.13
ERBB2-208ENST00000578630 FAM83GA6ND36 823 aa15.88■□□□□ 0.13
ERBB2-208ENST00000578630 ZC3H6P61129 1189 aaKnown RBP15.88■□□□□ 0.13
ERBB2-208ENST00000578630 NME9Q86XW9 330 aa15.88■□□□□ 0.13
ERBB2-208ENST00000578630 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
ERBB2-208ENST00000578630 AFF2P51816 1311 aa15.88■□□□□ 0.13
ERBB2-208ENST00000578630 COG3Q96JB2 828 aa15.87■□□□□ 0.13
ERBB2-208ENST00000578630 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
ERBB2-208ENST00000578630 RGS17Q9UGC6 210 aaPredicted RBP15.87■□□□□ 0.13
ERBB2-208ENST00000578630 USP21Q9UK80 565 aa15.87■□□□□ 0.13
ERBB2-208ENST00000578630 CARD14Q9BXL6 1004 aa15.86■□□□□ 0.13
ERBB2-208ENST00000578630 USP19O94966 1318 aa15.86■□□□□ 0.13
ERBB2-208ENST00000578630 USP31Q70CQ4 1352 aa15.86■□□□□ 0.13
ERBB2-208ENST00000578630 FYB1O15117 783 aa15.85■□□□□ 0.13
ERBB2-208ENST00000578630 QTRT2Q9H974 415 aaKnown RBP15.85■□□□□ 0.13
ERBB2-208ENST00000578630 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
ERBB2-208ENST00000578630 ALS2Q96Q42 1657 aa15.85■□□□□ 0.13
ERBB2-208ENST00000578630 SOX12O15370 315 aa15.84■□□□□ 0.13
ERBB2-208ENST00000578630 UNC5CLQ8IV45 518 aa15.84■□□□□ 0.13
ERBB2-208ENST00000578630 TRPC5Q9UL62 973 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-208ENST00000578630 AKAP12Q02952 1782 aa15.84■□□□□ 0.13
ERBB2-208ENST00000578630 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
ERBB2-208ENST00000578630 EVA1CP58658 441 aa15.83■□□□□ 0.12
ERBB2-208ENST00000578630 KNSTRNQ9Y448 316 aa15.83■□□□□ 0.12
ERBB2-208ENST00000578630 CGNL1Q0VF96 1302 aa15.83■□□□□ 0.12
ERBB2-208ENST00000578630 CCDC7Q96M83 1385 aa15.83■□□□□ 0.12
ERBB2-208ENST00000578630 POTEAQ6S8J7 498 aa15.82■□□□□ 0.12
ERBB2-208ENST00000578630 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
ERBB2-208ENST00000578630 BTG4Q9NY30 223 aa15.82■□□□□ 0.12
ERBB2-208ENST00000578630 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
ERBB2-208ENST00000578630 KIAA0232Q92628 1395 aa15.82■□□□□ 0.12
ERBB2-208ENST00000578630 RXRBP28702 533 aa15.81■□□□□ 0.12
ERBB2-208ENST00000578630 CHRNA2Q15822 529 aa15.81■□□□□ 0.12
ERBB2-208ENST00000578630 NSD3Q9BZ95 1437 aa15.8■□□□□ 0.12
ERBB2-208ENST00000578630 CPDO75976 1380 aa15.8■□□□□ 0.12
ERBB2-208ENST00000578630 ARHGEF25Q86VW2 580 aa15.8■□□□□ 0.12
ERBB2-208ENST00000578630 MON2Q7Z3U7 1717 aa15.8■□□□□ 0.12
ERBB2-208ENST00000578630 RBM6P78332 1123 aaKnown RBP15.79■□□□□ 0.12
ERBB2-208ENST00000578630 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
ERBB2-208ENST00000578630 VPS72Q15906 364 aa15.77■□□□□ 0.12
ERBB2-208ENST00000578630 GJD4Q96KN9 370 aaPredicted RBP15.77■□□□□ 0.12
ERBB2-208ENST00000578630 SLIT2O94813 1529 aa15.77■□□□□ 0.11
ERBB2-208ENST00000578630 BCL9LQ86UU0 1499 aa15.77■□□□□ 0.11
ERBB2-208ENST00000578630 AATKQ6ZMQ8 1374 aa15.76■□□□□ 0.11
ERBB2-208ENST00000578630 STRN4Q9NRL3 753 aa15.76■□□□□ 0.11
ERBB2-208ENST00000578630 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
ERBB2-208ENST00000578630 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
ERBB2-208ENST00000578630 SLIT3O75094 1523 aa15.75■□□□□ 0.11
ERBB2-208ENST00000578630 PER1O15534 1290 aaPredicted RBP15.75■□□□□ 0.11
ERBB2-208ENST00000578630 AMPHP49418 695 aa15.75■□□□□ 0.11
ERBB2-208ENST00000578630 MORC1Q86VD1 984 aa15.74■□□□□ 0.11
ERBB2-208ENST00000578630 OVOS2A0A0J9YW53 1432 aa15.74■□□□□ 0.11
ERBB2-208ENST00000578630 OVOS2Q6IE36 1432 aa15.74■□□□□ 0.11
ERBB2-208ENST00000578630 IP6K1Q92551 441 aa15.73■□□□□ 0.11
ERBB2-208ENST00000578630 AXIN2Q9Y2T1 843 aa15.73■□□□□ 0.11
ERBB2-208ENST00000578630 MARF1Q9Y4F3 1742 aaKnown RBP15.73■□□□□ 0.11
ERBB2-208ENST00000578630 NSD2O96028 1365 aa15.73■□□□□ 0.11
ERBB2-208ENST00000578630 MYOM1P52179 1685 aa15.73■□□□□ 0.11
ERBB2-208ENST00000578630 ATRNO75882 1429 aa15.72■□□□□ 0.11
ERBB2-208ENST00000578630 CSB-PGBD3P0DP91 1061 aa15.72■□□□□ 0.11
ERBB2-208ENST00000578630 FBLN1P23142 703 aa15.72■□□□□ 0.11
ERBB2-208ENST00000578630 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
ERBB2-208ENST00000578630 AMER1Q5JTC6 1135 aaPredicted RBP15.71■□□□□ 0.11
ERBB2-208ENST00000578630 ILDR2Q71H61 639 aa15.71■□□□□ 0.11
ERBB2-208ENST00000578630 PHRF1Q9P1Y6 1649 aaKnown RBP15.71■□□□□ 0.11
ERBB2-208ENST00000578630 ABCA3Q99758 1704 aa15.71■□□□□ 0.1
ERBB2-208ENST00000578630 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
ERBB2-208ENST00000578630 RRS1Q15050 365 aaKnown RBP15.7■□□□□ 0.1
ERBB2-208ENST00000578630 LARP1Q6PKG0 1096 aaKnown RBP15.7■□□□□ 0.1
ERBB2-208ENST00000578630 TOM1L2Q6ZVM7 507 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms