RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ADAM23O75077 832 aa8.32□□□□□ -1.08
TOP2A-202ENST00000577541 CCNYL3P0C7X3 344 aa8.32□□□□□ -1.08
TOP2A-202ENST00000577541 MARSP56192 900 aaKnown RBP8.32□□□□□ -1.08
TOP2A-202ENST00000577541 RETREG3Q86VR2 466 aa8.32□□□□□ -1.08
TOP2A-202ENST00000577541 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
TOP2A-202ENST00000577541 COL25A1Q9BXS0 654 aaPredicted RBP8.31□□□□□ -1.08
TOP2A-202ENST00000577541 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
TOP2A-202ENST00000577541 TESPA1A2RU30 521 aaPredicted RBP8.3□□□□□ -1.08
TOP2A-202ENST00000577541 ARHGEF15O94989 841 aa8.3□□□□□ -1.08
TOP2A-202ENST00000577541 ZIC2O95409 532 aaPredicted RBP8.3□□□□□ -1.08
TOP2A-202ENST00000577541 SCARF2Q96GP6 870 aaPredicted RBP8.3□□□□□ -1.08
TOP2A-202ENST00000577541 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
TOP2A-202ENST00000577541 UPP2O95045 317 aa8.29□□□□□ -1.08
TOP2A-202ENST00000577541 MS4A1P11836 297 aa8.29□□□□□ -1.08
TOP2A-202ENST00000577541 BMP2P12643 396 aa8.29□□□□□ -1.08
TOP2A-202ENST00000577541 RNFT1Q5M7Z0 435 aa8.29□□□□□ -1.08
TOP2A-202ENST00000577541 ZNF511Q8NB15 262 aa8.29□□□□□ -1.08
TOP2A-202ENST00000577541 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
TOP2A-202ENST00000577541 ITPKCQ96DU7 683 aa8.28□□□□□ -1.08
TOP2A-202ENST00000577541 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
TOP2A-202ENST00000577541 SOS2Q07890 1332 aaPredicted RBP8.28□□□□□ -1.08
TOP2A-202ENST00000577541 MSTNO14793 375 aa8.27□□□□□ -1.09
TOP2A-202ENST00000577541 SLURP2P0DP57 97 aa8.27□□□□□ -1.09
TOP2A-202ENST00000577541 SMYD5Q6GMV2 418 aa8.27□□□□□ -1.09
TOP2A-202ENST00000577541 PCDHGC3Q9UN70 934 aa8.27□□□□□ -1.09
TOP2A-202ENST00000577541 NR3C2P08235 984 aa8.26□□□□□ -1.09
TOP2A-202ENST00000577541 FAM174AQ8TBP5 190 aa8.26□□□□□ -1.09
TOP2A-202ENST00000577541 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
TOP2A-202ENST00000577541 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
TOP2A-202ENST00000577541 KCNH2Q12809 1159 aa8.25□□□□□ -1.09
TOP2A-202ENST00000577541 PTPRNQ16849 979 aa8.25□□□□□ -1.09
TOP2A-202ENST00000577541 P3H3Q8IVL6 736 aa8.25□□□□□ -1.09
TOP2A-202ENST00000577541 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
TOP2A-202ENST00000577541 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
TOP2A-202ENST00000577541 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.24□□□□□ -1.09
TOP2A-202ENST00000577541 CDK15Q96Q40 435 aa8.24□□□□□ -1.09
TOP2A-202ENST00000577541 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
TOP2A-202ENST00000577541 NR5A1Q13285 461 aa8.23□□□□□ -1.09
TOP2A-202ENST00000577541 ARID5BQ14865 1188 aa8.23□□□□□ -1.09
TOP2A-202ENST00000577541 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
TOP2A-202ENST00000577541 ITGB2P05107 769 aa8.22□□□□□ -1.09
TOP2A-202ENST00000577541 MDM2Q00987 491 aaPredicted RBP8.22□□□□□ -1.09
TOP2A-202ENST00000577541 PTSQ03393 145 aa8.22□□□□□ -1.09
TOP2A-202ENST00000577541 PLA2G4EQ3MJ16 856 aa8.22□□□□□ -1.09
TOP2A-202ENST00000577541 MEIOBQ8N635 442 aa8.22□□□□□ -1.09
TOP2A-202ENST00000577541 SPOCK3Q9BQ16 436 aa8.22□□□□□ -1.09
TOP2A-202ENST00000577541 SPTLC1O15269 473 aa8.21□□□□□ -1.1
TOP2A-202ENST00000577541 GRM5P41594 1212 aa8.2□□□□□ -1.1
TOP2A-202ENST00000577541 FOXJ1Q92949 421 aa8.2□□□□□ -1.1
TOP2A-202ENST00000577541 CCDC155Q8N6L0 562 aa8.19□□□□□ -1.1
TOP2A-202ENST00000577541 TTLL8A6PVC2 850 aa8.18□□□□□ -1.1
TOP2A-202ENST00000577541 FDX1P10109 184 aa8.18□□□□□ -1.1
TOP2A-202ENST00000577541 NUTM1Q86Y26 1132 aa8.18□□□□□ -1.1
TOP2A-202ENST00000577541 TSEN34Q9BSV6 310 aaKnown RBP8.18□□□□□ -1.1
TOP2A-202ENST00000577541 DCAF5Q96JK2 942 aa8.17□□□□□ -1.1
TOP2A-202ENST00000577541 MAP3K10Q02779 954 aa8.16□□□□□ -1.1
TOP2A-202ENST00000577541 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
TOP2A-202ENST00000577541 LYPD4Q6UWN0 246 aa8.16□□□□□ -1.1
TOP2A-202ENST00000577541 VWA5B2Q8N398 1253 aa8.16□□□□□ -1.1
TOP2A-202ENST00000577541 Q8N3U1 123 aa8.16□□□□□ -1.1
TOP2A-202ENST00000577541 SV2AQ7L0J3 742 aa8.15□□□□□ -1.1
TOP2A-202ENST00000577541 FIGNL2A6NMB9 653 aa8.14□□□□□ -1.11
TOP2A-202ENST00000577541 K7ELQ4 463 aaPredicted RBP8.14□□□□□ -1.11
TOP2A-202ENST00000577541 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
TOP2A-202ENST00000577541 PROCP04070 461 aa8.14□□□□□ -1.11
TOP2A-202ENST00000577541 GALNT6Q8NCL4 622 aa8.14□□□□□ -1.11
TOP2A-202ENST00000577541 FAM217BQ9NTX9 383 aaPredicted RBP8.14□□□□□ -1.11
TOP2A-202ENST00000577541 CDC14CA4D256 554 aa8.13□□□□□ -1.11
TOP2A-202ENST00000577541 SLC35F4A4IF30 521 aa8.13□□□□□ -1.11
TOP2A-202ENST00000577541 PHF20L1A8MW92 1017 aa8.13□□□□□ -1.11
TOP2A-202ENST00000577541 ITGA6P23229 1130 aa8.13□□□□□ -1.11
TOP2A-202ENST00000577541 DESI1Q6ICB0 168 aa8.13□□□□□ -1.11
TOP2A-202ENST00000577541 GPIHBP1Q8IV16 184 aa8.13□□□□□ -1.11
TOP2A-202ENST00000577541 PRR7Q8TB68 274 aa8.13□□□□□ -1.11
TOP2A-202ENST00000577541 ENAMQ9NRM1 1142 aa8.13□□□□□ -1.11
TOP2A-202ENST00000577541 NDUFV2P19404 249 aa8.12□□□□□ -1.11
TOP2A-202ENST00000577541 CTHP32929 405 aa8.12□□□□□ -1.11
TOP2A-202ENST00000577541 IRF6O14896 467 aa8.11□□□□□ -1.11
TOP2A-202ENST00000577541 CELA2BP08218 269 aaPredicted RBP8.11□□□□□ -1.11
TOP2A-202ENST00000577541 MAP2K5Q13163 448 aa8.11□□□□□ -1.11
TOP2A-202ENST00000577541 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
TOP2A-202ENST00000577541 CNTNAP5Q8WYK1 1306 aa8.1□□□□□ -1.11
TOP2A-202ENST00000577541 SRSF11Q05519 484 aaKnown RBP8.1□□□□□ -1.11
TOP2A-202ENST00000577541 AGERQ15109 404 aa8.09□□□□□ -1.11
TOP2A-202ENST00000577541 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
TOP2A-202ENST00000577541 GPCPD1Q9NPB8 672 aa8.08□□□□□ -1.12
TOP2A-202ENST00000577541 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
TOP2A-202ENST00000577541 EMILIN1Q9Y6C2 1016 aa8.08□□□□□ -1.12
TOP2A-202ENST00000577541 MOXD2PA6NHM9 499 aa8.07□□□□□ -1.12
TOP2A-202ENST00000577541 SPDYE5A6NIY4 337 aa8.07□□□□□ -1.12
TOP2A-202ENST00000577541 BPHLQ86WA6 291 aaPredicted RBP8.07□□□□□ -1.12
TOP2A-202ENST00000577541 SPIRE2Q8WWL2 714 aa8.07□□□□□ -1.12
TOP2A-202ENST00000577541 SPINT1O43278 529 aa8.06□□□□□ -1.12
TOP2A-202ENST00000577541 CLCN1P35523 988 aa8.06□□□□□ -1.12
TOP2A-202ENST00000577541 MTMR2Q13614 643 aa8.06□□□□□ -1.12
TOP2A-202ENST00000577541 LYPD8Q6UX82 237 aa8.06□□□□□ -1.12
TOP2A-202ENST00000577541 SH3RF1Q7Z6J0 888 aa8.06□□□□□ -1.12
TOP2A-202ENST00000577541 FSHRP23945 695 aa8.05□□□□□ -1.12
TOP2A-202ENST00000577541 PODNQ7Z5L7 613 aa8.05□□□□□ -1.12
TOP2A-202ENST00000577541 F12P00748 615 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms