RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
RPAIN-216ENST00000575599 ARHGEF10O15013 1369 aa18.75■□□□□ 0.59
RPAIN-216ENST00000575599 PAK3O75914 559 aaPredicted RBP18.75■□□□□ 0.59
RPAIN-216ENST00000575599 ACEP12821 1306 aa18.75■□□□□ 0.59
RPAIN-216ENST00000575599 AFF2P51816 1311 aa18.75■□□□□ 0.59
RPAIN-216ENST00000575599 POLR3AO14802 1390 aaPredicted RBP18.74■□□□□ 0.59
RPAIN-216ENST00000575599 HAP1P54257 671 aaPredicted RBP18.74■□□□□ 0.59
RPAIN-216ENST00000575599 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
RPAIN-216ENST00000575599 ALS2Q96Q42 1657 aa18.74■□□□□ 0.59
RPAIN-216ENST00000575599 SBNO2Q9Y2G9 1366 aa18.74■□□□□ 0.59
RPAIN-216ENST00000575599 PLEKHG3A1L390 1219 aa18.73■□□□□ 0.59
RPAIN-216ENST00000575599 CABLES1Q8TDN4 633 aa18.73■□□□□ 0.59
RPAIN-216ENST00000575599 NGLY1Q96IV0 654 aa18.73■□□□□ 0.59
RPAIN-216ENST00000575599 ABCA3Q99758 1704 aa18.72■□□□□ 0.59
RPAIN-216ENST00000575599 MARF1Q9Y4F3 1742 aaKnown RBP18.72■□□□□ 0.59
RPAIN-216ENST00000575599 CABP1Q9NZU7 370 aa18.71■□□□□ 0.59
RPAIN-216ENST00000575599 USP47Q96K76 1375 aa18.7■□□□□ 0.58
RPAIN-216ENST00000575599 ST20-MTHFSA0A0A6YYL1 179 aa18.69■□□□□ 0.58
RPAIN-216ENST00000575599 ATAD2Q6PL18 1390 aa18.69■□□□□ 0.58
RPAIN-216ENST00000575599 USP21Q9UK80 565 aa18.67■□□□□ 0.58
RPAIN-216ENST00000575599 NUTM2GQ5VZR2 741 aa18.66■□□□□ 0.58
RPAIN-216ENST00000575599 TESK2Q96S53 571 aa18.66■□□□□ 0.58
RPAIN-216ENST00000575599 SPINK5Q9NQ38 1064 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-216ENST00000575599 USP6P35125 1406 aa18.65■□□□□ 0.58
RPAIN-216ENST00000575599 CRYBG1Q9Y4K1 1723 aa18.65■□□□□ 0.58
RPAIN-216ENST00000575599 SOCS7O14512 581 aa18.65■□□□□ 0.58
RPAIN-216ENST00000575599 FNBP4Q8N3X1 1017 aaPredicted RBP18.64■□□□□ 0.57
RPAIN-216ENST00000575599 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
RPAIN-216ENST00000575599 ABTB2Q8N961 1025 aa18.63■□□□□ 0.57
RPAIN-216ENST00000575599 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
RPAIN-216ENST00000575599 QTRT2Q9H974 415 aaKnown RBP18.63■□□□□ 0.57
RPAIN-216ENST00000575599 PHRF1Q9P1Y6 1649 aaKnown RBP18.63■□□□□ 0.57
RPAIN-216ENST00000575599 PLCH1Q4KWH8 1693 aa18.62■□□□□ 0.57
RPAIN-216ENST00000575599 RXRBP28702 533 aa18.62■□□□□ 0.57
RPAIN-216ENST00000575599 U3KPZ7 1027 aaPredicted RBP18.62■□□□□ 0.57
RPAIN-216ENST00000575599 BRD4O60885 1362 aaPredicted RBP18.61■□□□□ 0.57
RPAIN-216ENST00000575599 SLIT2O94813 1529 aa18.61■□□□□ 0.57
RPAIN-216ENST00000575599 BCL9LQ86UU0 1499 aa18.6■□□□□ 0.57
RPAIN-216ENST00000575599 TRPC5Q9UL62 973 aaPredicted RBP18.6■□□□□ 0.57
RPAIN-216ENST00000575599 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
RPAIN-216ENST00000575599 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.59■□□□□ 0.57
RPAIN-216ENST00000575599 NRKQ7Z2Y5 1582 aa18.59■□□□□ 0.57
RPAIN-216ENST00000575599 ATRNO75882 1429 aa18.58■□□□□ 0.57
RPAIN-216ENST00000575599 CPSF1Q10570 1443 aaKnown RBP18.58■□□□□ 0.57
RPAIN-216ENST00000575599 SLC24A1O60721 1099 aa18.58■□□□□ 0.57
RPAIN-216ENST00000575599 RBM6P78332 1123 aaKnown RBP18.58■□□□□ 0.57
RPAIN-216ENST00000575599 TMF1P82094 1093 aa18.58■□□□□ 0.57
RPAIN-216ENST00000575599 ZNF692Q9BU19 519 aaPredicted RBP18.58■□□□□ 0.57
RPAIN-216ENST00000575599 MON2Q7Z3U7 1717 aa18.58■□□□□ 0.56
RPAIN-216ENST00000575599 PIK3C2AO00443 1686 aa18.58■□□□□ 0.56
RPAIN-216ENST00000575599 SSH2Q76I76 1423 aa18.58■□□□□ 0.56
RPAIN-216ENST00000575599 FAM83GA6ND36 823 aa18.57■□□□□ 0.56
RPAIN-216ENST00000575599 UNC5CLQ8IV45 518 aa18.57■□□□□ 0.56
RPAIN-216ENST00000575599 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
RPAIN-216ENST00000575599 COL14A1Q05707 1796 aaKnown RBP18.57■□□□□ 0.56
RPAIN-216ENST00000575599 NWD2Q9ULI1 1742 aa18.57■□□□□ 0.56
RPAIN-216ENST00000575599 NLRP13Q86W25 1043 aa18.56■□□□□ 0.56
RPAIN-216ENST00000575599 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
RPAIN-216ENST00000575599 PRDM11Q9NQV5 511 aa18.56■□□□□ 0.56
RPAIN-216ENST00000575599 CD163L1Q9NR16 1453 aa18.56■□□□□ 0.56
RPAIN-216ENST00000575599 TTC21BQ7Z4L5 1316 aa18.56■□□□□ 0.56
RPAIN-216ENST00000575599 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
RPAIN-216ENST00000575599 NLRP6P59044 892 aa18.55■□□□□ 0.56
RPAIN-216ENST00000575599 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-216ENST00000575599 USP19O94966 1318 aa18.55■□□□□ 0.56
RPAIN-216ENST00000575599 CDK12Q9NYV4 1490 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-216ENST00000575599 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
RPAIN-216ENST00000575599 RGS12O14924 1447 aa18.54■□□□□ 0.56
RPAIN-216ENST00000575599 A0A1W2PP64 1363 aa18.54■□□□□ 0.56
RPAIN-216ENST00000575599 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
RPAIN-216ENST00000575599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.54■□□□□ 0.56
RPAIN-216ENST00000575599 BTG4Q9NY30 223 aa18.54■□□□□ 0.56
RPAIN-216ENST00000575599 TERF2IPQ9NYB0 399 aa18.54■□□□□ 0.56
RPAIN-216ENST00000575599 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
RPAIN-216ENST00000575599 NRAPQ86VF7 1730 aa18.53■□□□□ 0.56
RPAIN-216ENST00000575599 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
RPAIN-216ENST00000575599 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
RPAIN-216ENST00000575599 EIF4G2P78344 907 aaKnown RBP eCLIP18.52■□□□□ 0.55
RPAIN-216ENST00000575599 CCDC9Q9Y3X0 531 aaKnown RBP18.52■□□□□ 0.55
RPAIN-216ENST00000575599 SLIT3O75094 1523 aa18.51■□□□□ 0.55
RPAIN-216ENST00000575599 GCP02774 474 aa18.51■□□□□ 0.55
RPAIN-216ENST00000575599 CDCA8Q53HL2 280 aa18.51■□□□□ 0.55
RPAIN-216ENST00000575599 GJD4Q96KN9 370 aaPredicted RBP18.51■□□□□ 0.55
RPAIN-216ENST00000575599 GLI3P10071 1580 aa18.5■□□□□ 0.55
RPAIN-216ENST00000575599 ZBTB7CA1YPR0 619 aa18.5■□□□□ 0.55
RPAIN-216ENST00000575599 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
RPAIN-216ENST00000575599 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
RPAIN-216ENST00000575599 SOX12O15370 315 aa18.49■□□□□ 0.55
RPAIN-216ENST00000575599 KCNA4P22459 653 aa18.49■□□□□ 0.55
RPAIN-216ENST00000575599 VPS72Q15906 364 aa18.49■□□□□ 0.55
RPAIN-216ENST00000575599 NME9Q86XW9 330 aa18.48■□□□□ 0.55
RPAIN-216ENST00000575599 CPDO75976 1380 aa18.48■□□□□ 0.55
RPAIN-216ENST00000575599 ZRANB1Q9UGI0 708 aa18.47■□□□□ 0.55
RPAIN-216ENST00000575599 ANKRD36BQ8N2N9 1353 aa18.47■□□□□ 0.55
RPAIN-216ENST00000575599 MYOM1P52179 1685 aa18.46■□□□□ 0.55
RPAIN-216ENST00000575599 POLR3GLQ9BT43 218 aa18.46■□□□□ 0.55
RPAIN-216ENST00000575599 STRN4Q9NRL3 753 aa18.46■□□□□ 0.55
RPAIN-216ENST00000575599 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
RPAIN-216ENST00000575599 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
RPAIN-216ENST00000575599 CAMTA1Q9Y6Y1 1673 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms