RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 PTPRTO14522 1441 aa20.35■□□□□ 0.85
RAB40B-206ENST00000571995 CCDC9Q9Y3X0 531 aaKnown RBP20.34■□□□□ 0.85
RAB40B-206ENST00000571995 FOXD4L6Q3SYB3 417 aaPredicted RBP20.34■□□□□ 0.85
RAB40B-206ENST00000571995 FOXD4L3Q6VB84 417 aaPredicted RBP20.34■□□□□ 0.85
RAB40B-206ENST00000571995 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
RAB40B-206ENST00000571995 POLKQ9UBT6 870 aa20.34■□□□□ 0.85
RAB40B-206ENST00000571995 HSCBQ8IWL3 235 aa20.33■□□□□ 0.85
RAB40B-206ENST00000571995 BLMP54132 1417 aaPredicted RBP20.33■□□□□ 0.85
RAB40B-206ENST00000571995 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
RAB40B-206ENST00000571995 ZFYVE16Q7Z3T8 1539 aa20.32■□□□□ 0.84
RAB40B-206ENST00000571995 WASLO00401 505 aaPredicted RBP20.32■□□□□ 0.84
RAB40B-206ENST00000571995 CSB-PGBD3P0DP91 1061 aa20.32■□□□□ 0.84
RAB40B-206ENST00000571995 TRPM1Q7Z4N2 1603 aa20.31■□□□□ 0.84
RAB40B-206ENST00000571995 STK31Q9BXU1 1019 aa20.31■□□□□ 0.84
RAB40B-206ENST00000571995 BRPF3Q9ULD4 1205 aa20.31■□□□□ 0.84
RAB40B-206ENST00000571995 EIF2AK4Q9P2K8 1649 aaKnown RBP20.3■□□□□ 0.84
RAB40B-206ENST00000571995 PSME1Q06323 249 aa20.3■□□□□ 0.84
RAB40B-206ENST00000571995 ESCO1Q5FWF5 840 aa20.3■□□□□ 0.84
RAB40B-206ENST00000571995 ATAD2Q6PL18 1390 aa20.3■□□□□ 0.84
RAB40B-206ENST00000571995 CLTCL1P53675 1640 aa20.29■□□□□ 0.84
RAB40B-206ENST00000571995 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
RAB40B-206ENST00000571995 ANKRD36BQ8N2N9 1353 aa20.29■□□□□ 0.84
RAB40B-206ENST00000571995 ZNF521Q96K83 1311 aa20.29■□□□□ 0.84
RAB40B-206ENST00000571995 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
RAB40B-206ENST00000571995 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.29■□□□□ 0.84
RAB40B-206ENST00000571995 TRIM6-TRIM34B2RNG4 842 aa20.29■□□□□ 0.84
RAB40B-206ENST00000571995 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.29■□□□□ 0.84
RAB40B-206ENST00000571995 C22orf23Q9BZE7 217 aa20.29■□□□□ 0.84
RAB40B-206ENST00000571995 F6X3S4 739 aa20.28■□□□□ 0.84
RAB40B-206ENST00000571995 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
RAB40B-206ENST00000571995 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
RAB40B-206ENST00000571995 GNAI1P63096 354 aa20.28■□□□□ 0.84
RAB40B-206ENST00000571995 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
RAB40B-206ENST00000571995 FOXO3O43524 673 aa20.28■□□□□ 0.84
RAB40B-206ENST00000571995 POLR3AO14802 1390 aaPredicted RBP20.27■□□□□ 0.84
RAB40B-206ENST00000571995 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.84
RAB40B-206ENST00000571995 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
RAB40B-206ENST00000571995 POGZQ7Z3K3 1410 aa20.27■□□□□ 0.83
RAB40B-206ENST00000571995 ZMYM4Q5VZL5 1548 aa20.27■□□□□ 0.83
RAB40B-206ENST00000571995 NFE2L2Q16236 605 aa20.27■□□□□ 0.83
RAB40B-206ENST00000571995 FCHSD2O94868 740 aa20.26■□□□□ 0.83
RAB40B-206ENST00000571995 C8orf58Q8NAV2 365 aa20.26■□□□□ 0.83
RAB40B-206ENST00000571995 KIF16BQ96L93 1317 aa20.25■□□□□ 0.83
RAB40B-206ENST00000571995 SMARCA5O60264 1052 aaPredicted RBP20.25■□□□□ 0.83
RAB40B-206ENST00000571995 GSE1Q14687 1217 aa20.25■□□□□ 0.83
RAB40B-206ENST00000571995 RILPL2Q969X0 211 aa20.25■□□□□ 0.83
RAB40B-206ENST00000571995 MBIPQ9NS73 344 aa20.25■□□□□ 0.83
RAB40B-206ENST00000571995 TRPM2O94759 1503 aa20.24■□□□□ 0.83
RAB40B-206ENST00000571995 IQGAP3Q86VI3 1631 aa20.23■□□□□ 0.83
RAB40B-206ENST00000571995 UHRF1BP1LA0JNW5 1464 aa20.23■□□□□ 0.83
RAB40B-206ENST00000571995 ACEP12821 1306 aa20.23■□□□□ 0.83
RAB40B-206ENST00000571995 LMOD3Q0VAK6 560 aa20.23■□□□□ 0.83
RAB40B-206ENST00000571995 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
RAB40B-206ENST00000571995 E9PCH4 1651 aa20.21■□□□□ 0.83
RAB40B-206ENST00000571995 TSHZ3Q63HK5 1081 aa20.21■□□□□ 0.83
RAB40B-206ENST00000571995 YTHDC2Q9H6S0 1430 aaKnown RBP20.2■□□□□ 0.82
RAB40B-206ENST00000571995 ANXA1P04083 346 aa20.2■□□□□ 0.82
RAB40B-206ENST00000571995 UNC13BO14795 1591 aa20.19■□□□□ 0.82
RAB40B-206ENST00000571995 ZC3H6P61129 1189 aaKnown RBP20.19■□□□□ 0.82
RAB40B-206ENST00000571995 USP35Q9P2H5 1018 aa20.19■□□□□ 0.82
RAB40B-206ENST00000571995 TEFQ10587 303 aa20.17■□□□□ 0.82
RAB40B-206ENST00000571995 TRMT2AQ8IZ69 625 aaKnown RBP20.17■□□□□ 0.82
RAB40B-206ENST00000571995 C16orf71Q8IYS4 520 aaPredicted RBP20.17■□□□□ 0.82
RAB40B-206ENST00000571995 PLXNC1O60486 1568 aa20.17■□□□□ 0.82
RAB40B-206ENST00000571995 CHD1LQ86WJ1 897 aa20.16■□□□□ 0.82
RAB40B-206ENST00000571995 MAP4K4O95819 1239 aaPredicted RBP20.15■□□□□ 0.82
RAB40B-206ENST00000571995 CASC1Q6TDU7 716 aa20.15■□□□□ 0.82
RAB40B-206ENST00000571995 RIMS2Q9UQ26 1411 aa20.15■□□□□ 0.82
RAB40B-206ENST00000571995 LTKP29376 864 aa20.15■□□□□ 0.82
RAB40B-206ENST00000571995 EXOC6BQ9Y2D4 811 aa20.15■□□□□ 0.82
RAB40B-206ENST00000571995 PPIP5K1Q6PFW1 1433 aa20.15■□□□□ 0.82
RAB40B-206ENST00000571995 TBC1D2Q9BYX2 928 aa20.14■□□□□ 0.82
RAB40B-206ENST00000571995 API5Q9BZZ5 524 aaKnown RBP20.14■□□□□ 0.82
RAB40B-206ENST00000571995 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.82
RAB40B-206ENST00000571995 CHMP3Q9Y3E7 222 aa20.14■□□□□ 0.81
RAB40B-206ENST00000571995 TSPOAP1O95153 1857 aa20.14■□□□□ 0.81
RAB40B-206ENST00000571995 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.81
RAB40B-206ENST00000571995 RBM42Q9BTD8 480 aaKnown RBP20.13■□□□□ 0.81
RAB40B-206ENST00000571995 KCNJ4P48050 445 aa20.13■□□□□ 0.81
RAB40B-206ENST00000571995 CHMP4BQ9H444 224 aaKnown RBP20.13■□□□□ 0.81
RAB40B-206ENST00000571995 NLRP2Q9NX02 1062 aa20.13■□□□□ 0.81
RAB40B-206ENST00000571995 METP08581 1390 aa20.12■□□□□ 0.81
RAB40B-206ENST00000571995 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
RAB40B-206ENST00000571995 NPC1L1Q9UHC9 1359 aa20.12■□□□□ 0.81
RAB40B-206ENST00000571995 MADDQ8WXG6 1647 aa20.12■□□□□ 0.81
RAB40B-206ENST00000571995 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
RAB40B-206ENST00000571995 IL1RAPL2Q9NP60 686 aa20.11■□□□□ 0.81
RAB40B-206ENST00000571995 VAMP4O75379 141 aa20.11■□□□□ 0.81
RAB40B-206ENST00000571995 ZNF692Q9BU19 519 aaPredicted RBP20.11■□□□□ 0.81
RAB40B-206ENST00000571995 CLASP1Q7Z460 1538 aa20.1■□□□□ 0.81
RAB40B-206ENST00000571995 INSRP06213 1382 aa20.09■□□□□ 0.81
RAB40B-206ENST00000571995 PLEKHF1Q96S99 279 aa20.09■□□□□ 0.81
RAB40B-206ENST00000571995 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
RAB40B-206ENST00000571995 MEIS3Q99687 375 aa20.08■□□□□ 0.81
RAB40B-206ENST00000571995 KCNA6P17658 529 aa20.08■□□□□ 0.8
RAB40B-206ENST00000571995 OTUD7AQ8TE49 926 aaPredicted RBP20.08■□□□□ 0.8
RAB40B-206ENST00000571995 TTC21BQ7Z4L5 1316 aa20.08■□□□□ 0.8
RAB40B-206ENST00000571995 MPRIPQ6WCQ1 1025 aa20.07■□□□□ 0.8
RAB40B-206ENST00000571995 PROSER2Q86WR7 435 aaPredicted RBP20.07■□□□□ 0.8
RAB40B-206ENST00000571995 PLCB2Q00722 1185 aa20.06■□□□□ 0.8
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