RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
LITAF-206ENST00000571277 COL14A1Q05707 1796 aaKnown RBP16.44■□□□□ 0.22
LITAF-206ENST00000571277 ONECUT3O60422 494 aaPredicted RBP16.43■□□□□ 0.22
LITAF-206ENST00000571277 TRPM1Q7Z4N2 1603 aa16.42■□□□□ 0.22
LITAF-206ENST00000571277 PHRF1Q9P1Y6 1649 aaKnown RBP16.42■□□□□ 0.22
LITAF-206ENST00000571277 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
LITAF-206ENST00000571277 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
LITAF-206ENST00000571277 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
LITAF-206ENST00000571277 PLEKHG3A1L390 1219 aa16.41■□□□□ 0.22
LITAF-206ENST00000571277 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
LITAF-206ENST00000571277 ACEP12821 1306 aa16.41■□□□□ 0.22
LITAF-206ENST00000571277 CENPJQ9HC77 1338 aaPredicted RBP16.41■□□□□ 0.22
LITAF-206ENST00000571277 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
LITAF-206ENST00000571277 SEPT12Q8IYM1 358 aa16.4■□□□□ 0.22
LITAF-206ENST00000571277 BTG4Q9NY30 223 aa16.4■□□□□ 0.22
LITAF-206ENST00000571277 CCDC125Q86Z20 511 aa16.38■□□□□ 0.21
LITAF-206ENST00000571277 CCDC9Q9Y3X0 531 aaKnown RBP16.37■□□□□ 0.21
LITAF-206ENST00000571277 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
LITAF-206ENST00000571277 CABP2Q9NPB3 220 aa16.36■□□□□ 0.21
LITAF-206ENST00000571277 PRDM11Q9NQV5 511 aa16.36■□□□□ 0.21
LITAF-206ENST00000571277 KIAA0232Q92628 1395 aa16.36■□□□□ 0.21
LITAF-206ENST00000571277 BLMP54132 1417 aaPredicted RBP16.36■□□□□ 0.21
LITAF-206ENST00000571277 NRKQ7Z2Y5 1582 aa16.35■□□□□ 0.21
LITAF-206ENST00000571277 SRPK2P78362 688 aaKnown RBP16.35■□□□□ 0.21
LITAF-206ENST00000571277 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
LITAF-206ENST00000571277 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
LITAF-206ENST00000571277 SPATA31A5Q5VU36 1347 aa16.35■□□□□ 0.21
LITAF-206ENST00000571277 SPATA31A7Q8IWB4 1347 aa16.35■□□□□ 0.21
LITAF-206ENST00000571277 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
LITAF-206ENST00000571277 FAM98CQ17RN3 349 aaKnown RBP16.34■□□□□ 0.21
LITAF-206ENST00000571277 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
LITAF-206ENST00000571277 KRT27Q7Z3Y8 459 aa16.33■□□□□ 0.2
LITAF-206ENST00000571277 USP19O94966 1318 aa16.33■□□□□ 0.2
LITAF-206ENST00000571277 ROCK2O75116 1388 aaKnown RBP16.32■□□□□ 0.2
LITAF-206ENST00000571277 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
LITAF-206ENST00000571277 LMO7Q8WWI1 1683 aa16.32■□□□□ 0.2
LITAF-206ENST00000571277 USP6P35125 1406 aa16.31■□□□□ 0.2
LITAF-206ENST00000571277 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
LITAF-206ENST00000571277 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
LITAF-206ENST00000571277 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
LITAF-206ENST00000571277 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
LITAF-206ENST00000571277 SSH2Q76I76 1423 aa16.3■□□□□ 0.2
LITAF-206ENST00000571277 CPDO75976 1380 aa16.3■□□□□ 0.2
LITAF-206ENST00000571277 CABP1Q9NZU7 370 aa16.3■□□□□ 0.2
LITAF-206ENST00000571277 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
LITAF-206ENST00000571277 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
LITAF-206ENST00000571277 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
LITAF-206ENST00000571277 DEFB132Q7Z7B7 95 aa16.28■□□□□ 0.2
LITAF-206ENST00000571277 A0A0G2JS52 829 aa16.27■□□□□ 0.2
LITAF-206ENST00000571277 GCP02774 474 aa16.27■□□□□ 0.2
LITAF-206ENST00000571277 MYT1Q01538 1121 aa16.27■□□□□ 0.2
LITAF-206ENST00000571277 NLRP13Q86W25 1043 aa16.27■□□□□ 0.2
LITAF-206ENST00000571277 ZRANB1Q9UGI0 708 aa16.27■□□□□ 0.2
LITAF-206ENST00000571277 SLIT3O75094 1523 aa16.27■□□□□ 0.2
LITAF-206ENST00000571277 AKAP12Q02952 1782 aa16.26■□□□□ 0.19
LITAF-206ENST00000571277 STRN4Q9NRL3 753 aa16.26■□□□□ 0.19
LITAF-206ENST00000571277 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
LITAF-206ENST00000571277 SBNO2Q9Y2G9 1366 aa16.25■□□□□ 0.19
LITAF-206ENST00000571277 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
LITAF-206ENST00000571277 COL5A2P05997 1499 aaPredicted RBP16.23■□□□□ 0.19
LITAF-206ENST00000571277 TNS1Q9HBL0 1735 aaKnown RBP16.23■□□□□ 0.19
LITAF-206ENST00000571277 CPSF1Q10570 1443 aaKnown RBP16.23■□□□□ 0.19
LITAF-206ENST00000571277 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
LITAF-206ENST00000571277 COL18A1P39060 1754 aa16.23■□□□□ 0.19
LITAF-206ENST00000571277 NLRP6P59044 892 aa16.22■□□□□ 0.19
LITAF-206ENST00000571277 SF3B2Q13435 895 aaKnown RBP16.22■□□□□ 0.19
LITAF-206ENST00000571277 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
LITAF-206ENST00000571277 TTC21BQ7Z4L5 1316 aa16.2■□□□□ 0.18
LITAF-206ENST00000571277 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
LITAF-206ENST00000571277 EVA1CP58658 441 aa16.2■□□□□ 0.18
LITAF-206ENST00000571277 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
LITAF-206ENST00000571277 USP35Q9P2H5 1018 aa16.2■□□□□ 0.18
LITAF-206ENST00000571277 AATKQ6ZMQ8 1374 aa16.2■□□□□ 0.18
LITAF-206ENST00000571277 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
LITAF-206ENST00000571277 TONSLQ96HA7 1378 aa16.19■□□□□ 0.18
LITAF-206ENST00000571277 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
LITAF-206ENST00000571277 CD163L1Q9NR16 1453 aa16.18■□□□□ 0.18
LITAF-206ENST00000571277 BAG6P46379 1132 aa16.18■□□□□ 0.18
LITAF-206ENST00000571277 TCP11L2Q8N4U5 519 aa16.18■□□□□ 0.18
LITAF-206ENST00000571277 PARP4Q9UKK3 1724 aaKnown RBP16.18■□□□□ 0.18
LITAF-206ENST00000571277 CRB1P82279 1406 aa16.17■□□□□ 0.18
LITAF-206ENST00000571277 TTC21AQ8NDW8 1320 aa16.17■□□□□ 0.18
LITAF-206ENST00000571277 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
LITAF-206ENST00000571277 NFAT5O94916 1531 aa16.16■□□□□ 0.18
LITAF-206ENST00000571277 USP54Q70EL1 1684 aa16.16■□□□□ 0.18
LITAF-206ENST00000571277 EN1Q05925 392 aaPredicted RBP16.16■□□□□ 0.18
LITAF-206ENST00000571277 TRIM26Q12899 539 aaPredicted RBP16.16■□□□□ 0.18
LITAF-206ENST00000571277 FAM196AQ6ZSG2 479 aa16.16■□□□□ 0.18
LITAF-206ENST00000571277 AXIN2Q9Y2T1 843 aa16.16■□□□□ 0.18
LITAF-206ENST00000571277 THRAP3Q9Y2W1 955 aaKnown RBP16.16■□□□□ 0.18
LITAF-206ENST00000571277 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
LITAF-206ENST00000571277 ARHGEF25Q86VW2 580 aa16.15■□□□□ 0.18
LITAF-206ENST00000571277 PEAK1Q9H792 1746 aa16.14■□□□□ 0.17
LITAF-206ENST00000571277 LRRC37A3O60309 1634 aa16.13■□□□□ 0.17
LITAF-206ENST00000571277 WNK3Q9BYP7 1800 aa16.13■□□□□ 0.17
LITAF-206ENST00000571277 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
LITAF-206ENST00000571277 TRIM37O94972 964 aa16.13■□□□□ 0.17
LITAF-206ENST00000571277 PDE3BQ13370 1112 aa16.12■□□□□ 0.17
LITAF-206ENST00000571277 KCNH5Q8NCM2 988 aa16.12■□□□□ 0.17
LITAF-206ENST00000571277 WDR17Q8IZU2 1322 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms