RNA–Protein interactions for RNA: ENST00000568119.5

SCAMP5-217, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-217ENST00000568119 ATAD2Q6PL18 1390 aa28.05■■■□□ 2.08
SCAMP5-217ENST00000568119 USP47Q96K76 1375 aa28.03■■■□□ 2.08
SCAMP5-217ENST00000568119 SLC24A1O60721 1099 aa28.02■■■□□ 2.08
SCAMP5-217ENST00000568119 FNBP4Q8N3X1 1017 aaPredicted RBP28.02■■■□□ 2.08
SCAMP5-217ENST00000568119 TESK2Q96S53 571 aa28.02■■■□□ 2.08
SCAMP5-217ENST00000568119 ABCA3Q99758 1704 aa28.01■■■□□ 2.07
SCAMP5-217ENST00000568119 USP21Q9UK80 565 aa28.01■■■□□ 2.07
SCAMP5-217ENST00000568119 QTRT2Q9H974 415 aaKnown RBP28■■■□□ 2.07
SCAMP5-217ENST00000568119 BRD4O60885 1362 aaPredicted RBP27.99■■■□□ 2.07
SCAMP5-217ENST00000568119 NUTM2GQ5VZR2 741 aa27.98■■■□□ 2.07
SCAMP5-217ENST00000568119 ABTB2Q8N961 1025 aa27.98■■■□□ 2.07
SCAMP5-217ENST00000568119 ZNF692Q9BU19 519 aaPredicted RBP27.98■■■□□ 2.07
SCAMP5-217ENST00000568119 RXRBP28702 533 aa27.97■■■□□ 2.07
SCAMP5-217ENST00000568119 PUS7Q96PZ0 661 aaKnown RBP27.97■■■□□ 2.07
SCAMP5-217ENST00000568119 USP6P35125 1406 aa27.97■■■□□ 2.07
SCAMP5-217ENST00000568119 TMC1Q8TDI8 760 aa27.95■■■□□ 2.06
SCAMP5-217ENST00000568119 AKAP12Q02952 1782 aa27.94■■■□□ 2.06
SCAMP5-217ENST00000568119 CRYBG1Q9Y4K1 1723 aa27.94■■■□□ 2.06
SCAMP5-217ENST00000568119 TRPC5Q9UL62 973 aaPredicted RBP27.93■■■□□ 2.06
SCAMP5-217ENST00000568119 TMF1P82094 1093 aa27.92■■■□□ 2.06
SCAMP5-217ENST00000568119 BCL9LQ86UU0 1499 aa27.91■■■□□ 2.06
SCAMP5-217ENST00000568119 RBM6P78332 1123 aaKnown RBP27.91■■■□□ 2.06
SCAMP5-217ENST00000568119 NLRP13Q86W25 1043 aa27.91■■■□□ 2.06
SCAMP5-217ENST00000568119 SLC12A5Q9H2X9 1139 aa27.91■■■□□ 2.06
SCAMP5-217ENST00000568119 SLIT2O94813 1529 aa27.91■■■□□ 2.06
SCAMP5-217ENST00000568119 CPSF1Q10570 1443 aaKnown RBP27.91■■■□□ 2.06
SCAMP5-217ENST00000568119 KTN1Q86UP2 1357 aaKnown RBP27.9■■■□□ 2.06
SCAMP5-217ENST00000568119 FAM83GA6ND36 823 aa27.9■■■□□ 2.06
SCAMP5-217ENST00000568119 SSH2Q76I76 1423 aa27.9■■■□□ 2.06
SCAMP5-217ENST00000568119 UNC5CLQ8IV45 518 aa27.89■■■□□ 2.06
SCAMP5-217ENST00000568119 PHRF1Q9P1Y6 1649 aaKnown RBP27.89■■■□□ 2.05
SCAMP5-217ENST00000568119 TTC21BQ7Z4L5 1316 aa27.88■■■□□ 2.05
SCAMP5-217ENST00000568119 ATRNO75882 1429 aa27.87■■■□□ 2.05
SCAMP5-217ENST00000568119 NLRP6P59044 892 aa27.87■■■□□ 2.05
SCAMP5-217ENST00000568119 HDGFL2Q7Z4V5 671 aaPredicted RBP27.87■■■□□ 2.05
SCAMP5-217ENST00000568119 PLCH1Q4KWH8 1693 aa27.87■■■□□ 2.05
SCAMP5-217ENST00000568119 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.86■■■□□ 2.05
SCAMP5-217ENST00000568119 MON2Q7Z3U7 1717 aa27.85■■■□□ 2.05
SCAMP5-217ENST00000568119 NWD2Q9ULI1 1742 aa27.85■■■□□ 2.05
SCAMP5-217ENST00000568119 PRDM11Q9NQV5 511 aa27.85■■■□□ 2.05
SCAMP5-217ENST00000568119 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
SCAMP5-217ENST00000568119 CD163L1Q9NR16 1453 aa27.84■■■□□ 2.05
SCAMP5-217ENST00000568119 COL14A1Q05707 1796 aaKnown RBP27.84■■■□□ 2.05
SCAMP5-217ENST00000568119 ZC3H6P61129 1189 aaKnown RBP27.84■■■□□ 2.05
SCAMP5-217ENST00000568119 USP19O94966 1318 aa27.84■■■□□ 2.05
SCAMP5-217ENST00000568119 TTC21AQ8NDW8 1320 aa27.84■■■□□ 2.05
SCAMP5-217ENST00000568119 EIF4G2P78344 907 aaKnown RBP eCLIP27.83■■■□□ 2.05
SCAMP5-217ENST00000568119 CDCA8Q53HL2 280 aa27.83■■■□□ 2.05
SCAMP5-217ENST00000568119 CDK12Q9NYV4 1490 aaPredicted RBP27.83■■■□□ 2.04
SCAMP5-217ENST00000568119 PIK3C2AO00443 1686 aa27.82■■■□□ 2.04
SCAMP5-217ENST00000568119 BTG4Q9NY30 223 aa27.82■■■□□ 2.04
SCAMP5-217ENST00000568119 KIAA0232Q92628 1395 aa27.82■■■□□ 2.04
SCAMP5-217ENST00000568119 NINLQ9Y2I6 1382 aa27.82■■■□□ 2.04
SCAMP5-217ENST00000568119 NRKQ7Z2Y5 1582 aa27.82■■■□□ 2.04
SCAMP5-217ENST00000568119 GCP02774 474 aa27.81■■■□□ 2.04
SCAMP5-217ENST00000568119 GJD4Q96KN9 370 aaPredicted RBP27.81■■■□□ 2.04
SCAMP5-217ENST00000568119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.8■■■□□ 2.04
SCAMP5-217ENST00000568119 A0A1W2PP64 1363 aa27.79■■■□□ 2.04
SCAMP5-217ENST00000568119 CHRNA2Q15822 529 aa27.79■■■□□ 2.04
SCAMP5-217ENST00000568119 HSPA5P11021 654 aaKnown RBP27.78■■■□□ 2.04
SCAMP5-217ENST00000568119 VPS72Q15906 364 aa27.77■■■□□ 2.04
SCAMP5-217ENST00000568119 CCDC9Q9Y3X0 531 aaKnown RBP27.77■■■□□ 2.04
SCAMP5-217ENST00000568119 RGS12O14924 1447 aa27.75■■■□□ 2.03
SCAMP5-217ENST00000568119 EDC4Q6P2E9 1401 aaKnown RBP27.75■■■□□ 2.03
SCAMP5-217ENST00000568119 NRAPQ86VF7 1730 aa27.75■■■□□ 2.03
SCAMP5-217ENST00000568119 SLIT3O75094 1523 aa27.75■■■□□ 2.03
SCAMP5-217ENST00000568119 CPDO75976 1380 aa27.74■■■□□ 2.03
SCAMP5-217ENST00000568119 NME9Q86XW9 330 aa27.73■■■□□ 2.03
SCAMP5-217ENST00000568119 ZRANB1Q9UGI0 708 aa27.72■■■□□ 2.03
SCAMP5-217ENST00000568119 GLI3P10071 1580 aa27.72■■■□□ 2.03
SCAMP5-217ENST00000568119 ZBTB7CA1YPR0 619 aa27.71■■■□□ 2.03
SCAMP5-217ENST00000568119 KCNH5Q8NCM2 988 aa27.71■■■□□ 2.03
SCAMP5-217ENST00000568119 ANKRD36BQ8N2N9 1353 aa27.71■■■□□ 2.03
SCAMP5-217ENST00000568119 USP31Q70CQ4 1352 aa27.7■■■□□ 2.02
SCAMP5-217ENST00000568119 SOX12O15370 315 aa27.69■■■□□ 2.02
SCAMP5-217ENST00000568119 EVA1CP58658 441 aa27.68■■■□□ 2.02
SCAMP5-217ENST00000568119 POLR3GLQ9BT43 218 aa27.68■■■□□ 2.02
SCAMP5-217ENST00000568119 STRN4Q9NRL3 753 aa27.68■■■□□ 2.02
SCAMP5-217ENST00000568119 LMO7Q8WWI1 1683 aa27.65■■■□□ 2.02
SCAMP5-217ENST00000568119 CAMTA1Q9Y6Y1 1673 aa27.65■■■□□ 2.02
SCAMP5-217ENST00000568119 USP54Q70EL1 1684 aa27.65■■■□□ 2.02
SCAMP5-217ENST00000568119 MYOM1P52179 1685 aa27.64■■■□□ 2.02
SCAMP5-217ENST00000568119 SPATA31A5Q5VU36 1347 aa27.64■■■□□ 2.01
SCAMP5-217ENST00000568119 SPATA31A7Q8IWB4 1347 aa27.64■■■□□ 2.01
SCAMP5-217ENST00000568119 AATKQ6ZMQ8 1374 aa27.63■■■□□ 2.01
SCAMP5-217ENST00000568119 ARHGEF25Q86VW2 580 aa27.63■■■□□ 2.01
SCAMP5-217ENST00000568119 ONECUT3O60422 494 aaPredicted RBP27.61■■■□□ 2.01
SCAMP5-217ENST00000568119 SEPT12Q8IYM1 358 aa27.61■■■□□ 2.01
SCAMP5-217ENST00000568119 NFAT5O94916 1531 aa27.61■■■□□ 2.01
SCAMP5-217ENST00000568119 FAM98CQ17RN3 349 aaKnown RBP27.6■■■□□ 2.01
SCAMP5-217ENST00000568119 COL18A1P39060 1754 aa27.59■■■□□ 2.01
SCAMP5-217ENST00000568119 COG3Q96JB2 828 aa27.59■■■□□ 2.01
SCAMP5-217ENST00000568119 OVOS2A0A0J9YW53 1432 aa27.58■■■□□ 2.01
SCAMP5-217ENST00000568119 OVOS2Q6IE36 1432 aa27.58■■■□□ 2.01
SCAMP5-217ENST00000568119 A0A0G2JS52 829 aa27.58■■■□□ 2.01
SCAMP5-217ENST00000568119 MYT1Q01538 1121 aa27.58■■■□□ 2.01
SCAMP5-217ENST00000568119 LARP1Q6PKG0 1096 aaKnown RBP27.58■■■□□ 2.01
SCAMP5-217ENST00000568119 SPATA31A1Q5TZJ5 1347 aa27.58■■■□□ 2.01
SCAMP5-217ENST00000568119 AXIN2Q9Y2T1 843 aa27.57■■■□□ 2
SCAMP5-217ENST00000568119 COL5A2P05997 1499 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms