RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
SMG1-213ENST00000567737 THSD7AQ9UPZ6 1657 aa20.96■□□□□ 0.95
SMG1-213ENST00000567737 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
SMG1-213ENST00000567737 KCNQ2O43526 872 aa20.94■□□□□ 0.94
SMG1-213ENST00000567737 COL14A1Q05707 1796 aaKnown RBP20.94■□□□□ 0.94
SMG1-213ENST00000567737 KNDC1Q76NI1 1749 aa20.92■□□□□ 0.94
SMG1-213ENST00000567737 ADGRF5Q8IZF2 1346 aa20.92■□□□□ 0.94
SMG1-213ENST00000567737 ZNF784Q8NCA9 323 aaPredicted RBP20.91■□□□□ 0.94
SMG1-213ENST00000567737 RRBP1Q9P2E9 1410 aaKnown RBP20.91■□□□□ 0.94
SMG1-213ENST00000567737 RREB1Q92766 1687 aa20.9■□□□□ 0.94
SMG1-213ENST00000567737 TMEM132EQ6IEE7 984 aa20.9■□□□□ 0.94
SMG1-213ENST00000567737 RGPD8O14715 1765 aaPredicted RBP20.89■□□□□ 0.93
SMG1-213ENST00000567737 IFT172Q9UG01 1749 aa20.89■□□□□ 0.93
SMG1-213ENST00000567737 NUP188Q5SRE5 1749 aa20.88■□□□□ 0.93
SMG1-213ENST00000567737 SPATA31A1Q5TZJ5 1347 aa20.87■□□□□ 0.93
SMG1-213ENST00000567737 PMFBP1Q8TBY8 1022 aa20.87■□□□□ 0.93
SMG1-213ENST00000567737 YTHDC2Q9H6S0 1430 aaKnown RBP20.87■□□□□ 0.93
SMG1-213ENST00000567737 SLC4A2P04920 1241 aa20.86■□□□□ 0.93
SMG1-213ENST00000567737 SIRT1Q96EB6 747 aa20.86■□□□□ 0.93
SMG1-213ENST00000567737 PRDM11Q9NQV5 511 aa20.86■□□□□ 0.93
SMG1-213ENST00000567737 ZBTB22O15209 634 aa20.85■□□□□ 0.93
SMG1-213ENST00000567737 CAMTA1Q9Y6Y1 1673 aa20.85■□□□□ 0.93
SMG1-213ENST00000567737 C1QTNF8P60827 252 aa20.84■□□□□ 0.93
SMG1-213ENST00000567737 PDE3BQ13370 1112 aa20.84■□□□□ 0.93
SMG1-213ENST00000567737 FOXD4L1Q9NU39 408 aa20.83■□□□□ 0.93
SMG1-213ENST00000567737 GPRASP1Q5JY77 1395 aa20.83■□□□□ 0.92
SMG1-213ENST00000567737 ANKRD30BQ9BXX2 1392 aa20.83■□□□□ 0.92
SMG1-213ENST00000567737 RGL3Q3MIN7 710 aa20.81■□□□□ 0.92
SMG1-213ENST00000567737 STRN4Q9NRL3 753 aa20.81■□□□□ 0.92
SMG1-213ENST00000567737 ANKARQ7Z5J8 1434 aa20.8■□□□□ 0.92
SMG1-213ENST00000567737 TRPM3Q9HCF6 1732 aaPredicted RBP20.8■□□□□ 0.92
SMG1-213ENST00000567737 PIK3C2GO75747 1445 aa20.79■□□□□ 0.92
SMG1-213ENST00000567737 USP35Q9P2H5 1018 aa20.79■□□□□ 0.92
SMG1-213ENST00000567737 ALS2Q96Q42 1657 aa20.79■□□□□ 0.92
SMG1-213ENST00000567737 SAFB2Q14151 953 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMG1-213ENST00000567737 BARGINQ6ZT62 677 aa20.76■□□□□ 0.91
SMG1-213ENST00000567737 PRAM1Q96QH2 718 aa20.76■□□□□ 0.91
SMG1-213ENST00000567737 ACIN1Q9UKV3 1341 aaKnown RBP20.76■□□□□ 0.91
SMG1-213ENST00000567737 KIAA0232Q92628 1395 aa20.75■□□□□ 0.91
SMG1-213ENST00000567737 PAK3O75914 559 aaPredicted RBP20.75■□□□□ 0.91
SMG1-213ENST00000567737 CHRNA2Q15822 529 aa20.75■□□□□ 0.91
SMG1-213ENST00000567737 NRKQ7Z2Y5 1582 aa20.75■□□□□ 0.91
SMG1-213ENST00000567737 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
SMG1-213ENST00000567737 EVA1CP58658 441 aa20.73■□□□□ 0.91
SMG1-213ENST00000567737 CRYBG1Q9Y4K1 1723 aa20.73■□□□□ 0.91
SMG1-213ENST00000567737 SPATA31E1Q6ZUB1 1445 aa20.72■□□□□ 0.91
SMG1-213ENST00000567737 POGKQ9P215 609 aa20.72■□□□□ 0.91
SMG1-213ENST00000567737 C11orf95C9JLR9 678 aaPredicted RBP20.71■□□□□ 0.91
SMG1-213ENST00000567737 NGDNQ8NEJ9 315 aaKnown RBP20.7■□□□□ 0.9
SMG1-213ENST00000567737 C14orf93Q9H972 538 aaKnown RBP20.7■□□□□ 0.9
SMG1-213ENST00000567737 EIF3AQ14152 1382 aaKnown RBP20.7■□□□□ 0.9
SMG1-213ENST00000567737 ZBTB7AO95365 584 aa20.69■□□□□ 0.9
SMG1-213ENST00000567737 TCP11L2Q8N4U5 519 aa20.69■□□□□ 0.9
SMG1-213ENST00000567737 SSH2Q76I76 1423 aa20.69■□□□□ 0.9
SMG1-213ENST00000567737 CASZ1Q86V15 1759 aa20.68■□□□□ 0.9
SMG1-213ENST00000567737 ZC3H6P61129 1189 aaKnown RBP20.68■□□□□ 0.9
SMG1-213ENST00000567737 ANO8Q9HCE9 1232 aaPredicted RBP20.68■□□□□ 0.9
SMG1-213ENST00000567737 MYOM1P52179 1685 aa20.67■□□□□ 0.9
SMG1-213ENST00000567737 PLSCR1O15162 318 aa20.66■□□□□ 0.9
SMG1-213ENST00000567737 CFAP70Q5T0N1 1121 aa20.66■□□□□ 0.9
SMG1-213ENST00000567737 SYT17Q9BSW7 474 aa20.66■□□□□ 0.9
SMG1-213ENST00000567737 FHDC1Q9C0D6 1143 aaPredicted RBP20.66■□□□□ 0.9
SMG1-213ENST00000567737 PRR36Q9H6K5 1346 aa20.65■□□□□ 0.9
SMG1-213ENST00000567737 GIGYF1O75420 1035 aaPredicted RBP20.65■□□□□ 0.9
SMG1-213ENST00000567737 PTGER2P43116 358 aa20.65■□□□□ 0.9
SMG1-213ENST00000567737 LARP1Q6PKG0 1096 aaKnown RBP20.65■□□□□ 0.9
SMG1-213ENST00000567737 HIRIP3Q9BW71 556 aaPredicted RBP20.65■□□□□ 0.9
SMG1-213ENST00000567737 BCL11BQ9C0K0 894 aaPredicted RBP20.65■□□□□ 0.9
SMG1-213ENST00000567737 PDGFDQ9GZP0 370 aaPredicted RBP20.65■□□□□ 0.9
SMG1-213ENST00000567737 ATF5Q9Y2D1 282 aaPredicted RBP20.65■□□□□ 0.9
SMG1-213ENST00000567737 THRAP3Q9Y2W1 955 aaKnown RBP20.65■□□□□ 0.9
SMG1-213ENST00000567737 DLC1Q96QB1 1528 aa20.64■□□□□ 0.9
SMG1-213ENST00000567737 RGPD3A6NKT7 1758 aaPredicted RBP20.64■□□□□ 0.89
SMG1-213ENST00000567737 RGPD4Q7Z3J3 1758 aa20.64■□□□□ 0.89
SMG1-213ENST00000567737 TULP4Q9NRJ4 1543 aa20.63■□□□□ 0.89
SMG1-213ENST00000567737 OVOS2A0A0G2JMS6 1433 aa20.63■□□□□ 0.89
SMG1-213ENST00000567737 OVOS2A0A0J9YW53 1432 aa20.63■□□□□ 0.89
SMG1-213ENST00000567737 OVOS2Q6IE36 1432 aa20.63■□□□□ 0.89
SMG1-213ENST00000567737 CHD4Q14839 1912 aa20.63■□□□□ 0.89
SMG1-213ENST00000567737 PHRF1Q9P1Y6 1649 aaKnown RBP20.63■□□□□ 0.89
SMG1-213ENST00000567737 UTRNP46939 3433 aa20.61■□□□□ 0.89
SMG1-213ENST00000567737 MINK1Q8N4C8 1332 aaPredicted RBP20.6■□□□□ 0.89
SMG1-213ENST00000567737 ATP7BP35670 1465 aa20.6■□□□□ 0.89
SMG1-213ENST00000567737 WASLO00401 505 aaPredicted RBP20.59■□□□□ 0.89
SMG1-213ENST00000567737 NUTM2GQ5VZR2 741 aa20.59■□□□□ 0.89
SMG1-213ENST00000567737 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.89
SMG1-213ENST00000567737 STK32BQ9NY57 414 aa20.58■□□□□ 0.89
SMG1-213ENST00000567737 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
SMG1-213ENST00000567737 MTFR1LQ9H019 292 aa20.57■□□□□ 0.88
SMG1-213ENST00000567737 TRAK1Q9UPV9 953 aa20.55■□□□□ 0.88
SMG1-213ENST00000567737 PEAK1Q9H792 1746 aa20.54■□□□□ 0.88
SMG1-213ENST00000567737 PROM2Q8N271 834 aa20.54■□□□□ 0.88
SMG1-213ENST00000567737 CPDO75976 1380 aa20.54■□□□□ 0.88
SMG1-213ENST00000567737 SLC15A2Q16348 729 aa20.53■□□□□ 0.88
SMG1-213ENST00000567737 DDB1Q16531 1140 aa20.53■□□□□ 0.88
SMG1-213ENST00000567737 GPR162Q16538 588 aa20.53■□□□□ 0.88
SMG1-213ENST00000567737 LMO7Q8WWI1 1683 aa20.52■□□□□ 0.88
SMG1-213ENST00000567737 ARXQ96QS3 562 aa20.52■□□□□ 0.88
SMG1-213ENST00000567737 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
SMG1-213ENST00000567737 SGIP1Q9BQI5 828 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms