RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-208ENST00000567111 PNPLA6Q8IY17 1366 aa31.24■■■□□ 2.59
E4F1-208ENST00000567111 TTC21BQ7Z4L5 1316 aa31.24■■■□□ 2.59
E4F1-208ENST00000567111 TTC21AQ8NDW8 1320 aa31.24■■■□□ 2.59
E4F1-208ENST00000567111 A0A1W2PP64 1363 aa31.23■■■□□ 2.59
E4F1-208ENST00000567111 CCDC7Q96M83 1385 aa31.23■■■□□ 2.59
E4F1-208ENST00000567111 AKAP12Q02952 1782 aa31.22■■■□□ 2.59
E4F1-208ENST00000567111 CD163L1Q9NR16 1453 aa31.22■■■□□ 2.59
E4F1-208ENST00000567111 NLRP13Q86W25 1043 aa31.2■■■□□ 2.59
E4F1-208ENST00000567111 TRPM3Q9HCF6 1732 aaPredicted RBP31.2■■■□□ 2.58
E4F1-208ENST00000567111 WASHC2AQ641Q2 1341 aa31.2■■■□□ 2.58
E4F1-208ENST00000567111 EDC4Q6P2E9 1401 aaKnown RBP31.19■■■□□ 2.58
E4F1-208ENST00000567111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.19■■■□□ 2.58
E4F1-208ENST00000567111 SHPRHQ149N8 1683 aa31.19■■■□□ 2.58
E4F1-208ENST00000567111 SSH2Q76I76 1423 aa31.18■■■□□ 2.58
E4F1-208ENST00000567111 NUTM2BA6NNL0 878 aaPredicted RBP31.18■■■□□ 2.58
E4F1-208ENST00000567111 NUTM2EB1AL46 878 aaPredicted RBP31.18■■■□□ 2.58
E4F1-208ENST00000567111 HAP1P54257 671 aaPredicted RBP31.18■■■□□ 2.58
E4F1-208ENST00000567111 NUTM2AQ8IVF1 878 aaPredicted RBP31.18■■■□□ 2.58
E4F1-208ENST00000567111 PANK3Q9H999 370 aa31.18■■■□□ 2.58
E4F1-208ENST00000567111 NLRP6P59044 892 aa31.17■■■□□ 2.58
E4F1-208ENST00000567111 NUTM2GQ5VZR2 741 aa31.15■■■□□ 2.58
E4F1-208ENST00000567111 MON2Q7Z3U7 1717 aa31.15■■■□□ 2.58
E4F1-208ENST00000567111 PLEKHG5O94827 1062 aa31.14■■■□□ 2.58
E4F1-208ENST00000567111 MYOM1P52179 1685 aa31.13■■■□□ 2.57
E4F1-208ENST00000567111 ALS2Q96Q42 1657 aa31.13■■■□□ 2.57
E4F1-208ENST00000567111 CARD14Q9BXL6 1004 aa31.12■■■□□ 2.57
E4F1-208ENST00000567111 CABLES1Q8TDN4 633 aa31.11■■■□□ 2.57
E4F1-208ENST00000567111 COL22A1Q8NFW1 1626 aaPredicted RBP31.1■■■□□ 2.57
E4F1-208ENST00000567111 MEX3CQ5U5Q3 659 aaKnown RBP31.1■■■□□ 2.57
E4F1-208ENST00000567111 NME9Q86XW9 330 aa31.08■■■□□ 2.57
E4F1-208ENST00000567111 KNSTRNQ9Y448 316 aa31.07■■■□□ 2.56
E4F1-208ENST00000567111 CGNL1Q0VF96 1302 aa31.06■■■□□ 2.56
E4F1-208ENST00000567111 NSD3Q9BZ95 1437 aa31.06■■■□□ 2.56
E4F1-208ENST00000567111 ADAMTS2O95450 1211 aa31.05■■■□□ 2.56
E4F1-208ENST00000567111 COG3Q96JB2 828 aa31.05■■■□□ 2.56
E4F1-208ENST00000567111 NRKQ7Z2Y5 1582 aa31.05■■■□□ 2.56
E4F1-208ENST00000567111 USP31Q70CQ4 1352 aa31.05■■■□□ 2.56
E4F1-208ENST00000567111 ZNF316A6NFI3 1004 aaPredicted RBP31.04■■■□□ 2.56
E4F1-208ENST00000567111 FYB1O15117 783 aa31.04■■■□□ 2.56
E4F1-208ENST00000567111 KCNH5Q8NCM2 988 aa31.04■■■□□ 2.56
E4F1-208ENST00000567111 USP19O94966 1318 aa31.02■■■□□ 2.56
E4F1-208ENST00000567111 GCP02774 474 aa31.02■■■□□ 2.56
E4F1-208ENST00000567111 MED1Q15648 1581 aaPredicted RBP31.01■■■□□ 2.56
E4F1-208ENST00000567111 ZRANB1Q9UGI0 708 aa31.01■■■□□ 2.55
E4F1-208ENST00000567111 PIK3C2AO00443 1686 aa31■■■□□ 2.55
E4F1-208ENST00000567111 GGNBP2Q9H3C7 697 aa30.99■■■□□ 2.55
E4F1-208ENST00000567111 NGLY1Q96IV0 654 aa30.98■■■□□ 2.55
E4F1-208ENST00000567111 ZC3H6P61129 1189 aaKnown RBP30.96■■■□□ 2.55
E4F1-208ENST00000567111 C8orf37Q96NL8 207 aa30.96■■■□□ 2.55
E4F1-208ENST00000567111 LRP6O75581 1613 aa30.95■■■□□ 2.55
E4F1-208ENST00000567111 PER1O15534 1290 aaPredicted RBP30.95■■■□□ 2.55
E4F1-208ENST00000567111 PHF23Q9BUL5 403 aaPredicted RBP30.94■■■□□ 2.54
E4F1-208ENST00000567111 SOX12O15370 315 aa30.93■■■□□ 2.54
E4F1-208ENST00000567111 PRDM11Q9NQV5 511 aa30.93■■■□□ 2.54
E4F1-208ENST00000567111 DDX10Q13206 875 aaKnown RBP30.92■■■□□ 2.54
E4F1-208ENST00000567111 NSD2O96028 1365 aa30.92■■■□□ 2.54
E4F1-208ENST00000567111 OVOS2A0A0J9YW53 1432 aa30.9■■■□□ 2.54
E4F1-208ENST00000567111 OVOS2Q6IE36 1432 aa30.9■■■□□ 2.54
E4F1-208ENST00000567111 SLIT3O75094 1523 aa30.9■■■□□ 2.54
E4F1-208ENST00000567111 FAM83GA6ND36 823 aa30.9■■■□□ 2.54
E4F1-208ENST00000567111 ABCA3Q99758 1704 aa30.89■■■□□ 2.54
E4F1-208ENST00000567111 KIF20BQ96Q89 1820 aa30.89■■■□□ 2.53
E4F1-208ENST00000567111 PHRF1Q9P1Y6 1649 aaKnown RBP30.88■■■□□ 2.53
E4F1-208ENST00000567111 CRYBG1Q9Y4K1 1723 aa30.88■■■□□ 2.53
E4F1-208ENST00000567111 ZBTB7CA1YPR0 619 aa30.88■■■□□ 2.53
E4F1-208ENST00000567111 CPDO75976 1380 aa30.88■■■□□ 2.53
E4F1-208ENST00000567111 KIAA0232Q92628 1395 aa30.88■■■□□ 2.53
E4F1-208ENST00000567111 USP54Q70EL1 1684 aa30.87■■■□□ 2.53
E4F1-208ENST00000567111 AMER1Q5JTC6 1135 aaPredicted RBP30.87■■■□□ 2.53
E4F1-208ENST00000567111 MORC1Q86VD1 984 aa30.87■■■□□ 2.53
E4F1-208ENST00000567111 FNBP4Q8N3X1 1017 aaPredicted RBP30.86■■■□□ 2.53
E4F1-208ENST00000567111 MARF1Q9Y4F3 1742 aaKnown RBP30.86■■■□□ 2.53
E4F1-208ENST00000567111 AFF2P51816 1311 aa30.85■■■□□ 2.53
E4F1-208ENST00000567111 ARHGEF25Q86VW2 580 aa30.85■■■□□ 2.53
E4F1-208ENST00000567111 ZNF772Q68DY9 489 aaPredicted RBP30.84■■■□□ 2.53
E4F1-208ENST00000567111 CHRNA2Q15822 529 aa30.83■■■□□ 2.53
E4F1-208ENST00000567111 USP21Q9UK80 565 aa30.83■■■□□ 2.53
E4F1-208ENST00000567111 NPC1L1Q9UHC9 1359 aa30.82■■■□□ 2.52
E4F1-208ENST00000567111 CC2D1BQ5T0F9 858 aaKnown RBP30.81■■■□□ 2.52
E4F1-208ENST00000567111 BTG4Q9NY30 223 aa30.8■■■□□ 2.52
E4F1-208ENST00000567111 AATKQ6ZMQ8 1374 aa30.79■■■□□ 2.52
E4F1-208ENST00000567111 COL14A1Q05707 1796 aaKnown RBP30.79■■■□□ 2.52
E4F1-208ENST00000567111 EVA1CP58658 441 aa30.78■■■□□ 2.52
E4F1-208ENST00000567111 UNC5CLQ8IV45 518 aa30.78■■■□□ 2.52
E4F1-208ENST00000567111 NFAT5O94916 1531 aa30.78■■■□□ 2.52
E4F1-208ENST00000567111 TNNT2P45379 298 aaPredicted RBP30.77■■■□□ 2.52
E4F1-208ENST00000567111 AMPHP49418 695 aa30.77■■■□□ 2.52
E4F1-208ENST00000567111 CNGB1Q14028 1251 aaPredicted RBP30.76■■■□□ 2.51
E4F1-208ENST00000567111 ILDR2Q71H61 639 aa30.76■■■□□ 2.51
E4F1-208ENST00000567111 SLIT2O94813 1529 aa30.75■■■□□ 2.51
E4F1-208ENST00000567111 FBLN1P23142 703 aa30.75■■■□□ 2.51
E4F1-208ENST00000567111 ANKRD26Q9UPS8 1709 aa30.74■■■□□ 2.51
E4F1-208ENST00000567111 QTRT2Q9H974 415 aaKnown RBP30.74■■■□□ 2.51
E4F1-208ENST00000567111 MAP3K19Q56UN5 1328 aa30.73■■■□□ 2.51
E4F1-208ENST00000567111 RRS1Q15050 365 aaKnown RBP30.73■■■□□ 2.51
E4F1-208ENST00000567111 IP6K1Q92551 441 aa30.73■■■□□ 2.51
E4F1-208ENST00000567111 TRPC5Q9UL62 973 aaPredicted RBP30.73■■■□□ 2.51
E4F1-208ENST00000567111 RGS17Q9UGC6 210 aaPredicted RBP30.71■■■□□ 2.51
E4F1-208ENST00000567111 BCL9LQ86UU0 1499 aa30.7■■■□□ 2.51
E4F1-208ENST00000567111 STRN4Q9NRL3 753 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms