RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-209ENST00000566749 MARF1Q9Y4F3 1742 aaKnown RBP34.72■■■■□ 3.15
PPP4C-209ENST00000566749 TESK2Q96S53 571 aa34.69■■■■□ 3.14
PPP4C-209ENST00000566749 ABCA3Q99758 1704 aa34.68■■■■□ 3.14
PPP4C-209ENST00000566749 SLC24A1O60721 1099 aa34.66■■■■□ 3.14
PPP4C-209ENST00000566749 FNBP4Q8N3X1 1017 aaPredicted RBP34.65■■■■□ 3.14
PPP4C-209ENST00000566749 USP21Q9UK80 565 aa34.65■■■■□ 3.14
PPP4C-209ENST00000566749 ABTB2Q8N961 1025 aa34.63■■■■□ 3.13
PPP4C-209ENST00000566749 USP6P35125 1406 aa34.63■■■■□ 3.13
PPP4C-209ENST00000566749 NUTM2GQ5VZR2 741 aa34.62■■■■□ 3.13
PPP4C-209ENST00000566749 BRD4O60885 1362 aaPredicted RBP34.62■■■■□ 3.13
PPP4C-209ENST00000566749 ZNF692Q9BU19 519 aaPredicted RBP34.61■■■■□ 3.13
PPP4C-209ENST00000566749 QTRT2Q9H974 415 aaKnown RBP34.61■■■■□ 3.13
PPP4C-209ENST00000566749 TMC1Q8TDI8 760 aa34.6■■■■□ 3.13
PPP4C-209ENST00000566749 PUS7Q96PZ0 661 aaKnown RBP34.6■■■■□ 3.13
PPP4C-209ENST00000566749 SOCS7O14512 581 aa34.59■■■■□ 3.13
PPP4C-209ENST00000566749 RXRBP28702 533 aa34.58■■■■□ 3.13
PPP4C-209ENST00000566749 AKAP12Q02952 1782 aa34.58■■■■□ 3.13
PPP4C-209ENST00000566749 CRYBG1Q9Y4K1 1723 aa34.57■■■■□ 3.12
PPP4C-209ENST00000566749 TMF1P82094 1093 aa34.56■■■■□ 3.12
PPP4C-209ENST00000566749 TRPC5Q9UL62 973 aaPredicted RBP34.55■■■■□ 3.12
PPP4C-209ENST00000566749 CPSF1Q10570 1443 aaKnown RBP34.54■■■■□ 3.12
PPP4C-209ENST00000566749 BCL9LQ86UU0 1499 aa34.54■■■■□ 3.12
PPP4C-209ENST00000566749 SLC12A5Q9H2X9 1139 aa34.53■■■■□ 3.12
PPP4C-209ENST00000566749 KTN1Q86UP2 1357 aaKnown RBP34.53■■■■□ 3.12
PPP4C-209ENST00000566749 SSH2Q76I76 1423 aa34.53■■■■□ 3.12
PPP4C-209ENST00000566749 NLRP13Q86W25 1043 aa34.52■■■■□ 3.12
PPP4C-209ENST00000566749 SLIT2O94813 1529 aa34.52■■■■□ 3.12
PPP4C-209ENST00000566749 PHRF1Q9P1Y6 1649 aaKnown RBP34.52■■■■□ 3.12
PPP4C-209ENST00000566749 FAM83GA6ND36 823 aa34.51■■■■□ 3.11
PPP4C-209ENST00000566749 RBM6P78332 1123 aaKnown RBP34.51■■■■□ 3.11
PPP4C-209ENST00000566749 HDGFL2Q7Z4V5 671 aaPredicted RBP34.49■■■■□ 3.11
PPP4C-209ENST00000566749 UNC5CLQ8IV45 518 aa34.49■■■■□ 3.11
PPP4C-209ENST00000566749 TTC21BQ7Z4L5 1316 aa34.49■■■■□ 3.11
PPP4C-209ENST00000566749 PLCH1Q4KWH8 1693 aa34.48■■■■□ 3.11
PPP4C-209ENST00000566749 NLRP6P59044 892 aa34.48■■■■□ 3.11
PPP4C-209ENST00000566749 ATRNO75882 1429 aa34.48■■■■□ 3.11
PPP4C-209ENST00000566749 MON2Q7Z3U7 1717 aa34.48■■■■□ 3.11
PPP4C-209ENST00000566749 TERF2IPQ9NYB0 399 aa34.47■■■■□ 3.11
PPP4C-209ENST00000566749 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.47■■■■□ 3.11
PPP4C-209ENST00000566749 CD163L1Q9NR16 1453 aa34.47■■■■□ 3.11
PPP4C-209ENST00000566749 PRDM11Q9NQV5 511 aa34.46■■■■□ 3.11
PPP4C-209ENST00000566749 USP19O94966 1318 aa34.46■■■■□ 3.11
PPP4C-209ENST00000566749 NINLQ9Y2I6 1382 aa34.46■■■■□ 3.11
PPP4C-209ENST00000566749 NWD2Q9ULI1 1742 aa34.46■■■■□ 3.11
PPP4C-209ENST00000566749 CDCA8Q53HL2 280 aa34.46■■■■□ 3.11
PPP4C-209ENST00000566749 TTC21AQ8NDW8 1320 aa34.45■■■■□ 3.11
PPP4C-209ENST00000566749 NRKQ7Z2Y5 1582 aa34.45■■■■□ 3.11
PPP4C-209ENST00000566749 COL14A1Q05707 1796 aaKnown RBP34.45■■■■□ 3.11
PPP4C-209ENST00000566749 ZC3H6P61129 1189 aaKnown RBP34.45■■■■□ 3.1
PPP4C-209ENST00000566749 EIF4G2P78344 907 aaKnown RBP eCLIP34.45■■■■□ 3.1
PPP4C-209ENST00000566749 PIK3C2AO00443 1686 aa34.45■■■■□ 3.1
PPP4C-209ENST00000566749 KIAA0232Q92628 1395 aa34.43■■■■□ 3.1
PPP4C-209ENST00000566749 CDK12Q9NYV4 1490 aaPredicted RBP34.42■■■■□ 3.1
PPP4C-209ENST00000566749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.41■■■■□ 3.1
PPP4C-209ENST00000566749 BTG4Q9NY30 223 aa34.41■■■■□ 3.1
PPP4C-209ENST00000566749 A0A1W2PP64 1363 aa34.41■■■■□ 3.1
PPP4C-209ENST00000566749 GCP02774 474 aa34.4■■■■□ 3.1
PPP4C-209ENST00000566749 HSPA5P11021 654 aaKnown RBP34.39■■■■□ 3.1
PPP4C-209ENST00000566749 CHRNA2Q15822 529 aa34.39■■■■□ 3.1
PPP4C-209ENST00000566749 GJD4Q96KN9 370 aaPredicted RBP34.39■■■■□ 3.1
PPP4C-209ENST00000566749 EDC4Q6P2E9 1401 aaKnown RBP34.36■■■■□ 3.09
PPP4C-209ENST00000566749 RGS12O14924 1447 aa34.36■■■■□ 3.09
PPP4C-209ENST00000566749 VPS72Q15906 364 aa34.35■■■■□ 3.09
PPP4C-209ENST00000566749 CCDC9Q9Y3X0 531 aaKnown RBP34.35■■■■□ 3.09
PPP4C-209ENST00000566749 SLIT3O75094 1523 aa34.34■■■■□ 3.09
PPP4C-209ENST00000566749 NRAPQ86VF7 1730 aa34.34■■■■□ 3.09
PPP4C-209ENST00000566749 CPDO75976 1380 aa34.34■■■■□ 3.09
PPP4C-209ENST00000566749 ANKRD36BQ8N2N9 1353 aa34.32■■■■□ 3.08
PPP4C-209ENST00000566749 NME9Q86XW9 330 aa34.32■■■■□ 3.08
PPP4C-209ENST00000566749 ZBTB7CA1YPR0 619 aa34.29■■■■□ 3.08
PPP4C-209ENST00000566749 KCNH5Q8NCM2 988 aa34.29■■■■□ 3.08
PPP4C-209ENST00000566749 ZRANB1Q9UGI0 708 aa34.29■■■■□ 3.08
PPP4C-209ENST00000566749 GLI3P10071 1580 aa34.29■■■■□ 3.08
PPP4C-209ENST00000566749 SOX12O15370 315 aa34.28■■■■□ 3.08
PPP4C-209ENST00000566749 USP31Q70CQ4 1352 aa34.27■■■■□ 3.08
PPP4C-209ENST00000566749 POLR3GLQ9BT43 218 aa34.27■■■■□ 3.08
PPP4C-209ENST00000566749 STRN4Q9NRL3 753 aa34.26■■■■□ 3.07
PPP4C-209ENST00000566749 MYOM1P52179 1685 aa34.23■■■■□ 3.07
PPP4C-209ENST00000566749 EVA1CP58658 441 aa34.23■■■■□ 3.07
PPP4C-209ENST00000566749 USP54Q70EL1 1684 aa34.22■■■■□ 3.07
PPP4C-209ENST00000566749 LMO7Q8WWI1 1683 aa34.22■■■■□ 3.07
PPP4C-209ENST00000566749 CAMTA1Q9Y6Y1 1673 aa34.22■■■■□ 3.07
PPP4C-209ENST00000566749 ARHGEF25Q86VW2 580 aa34.19■■■■□ 3.06
PPP4C-209ENST00000566749 SPATA31A5Q5VU36 1347 aa34.19■■■■□ 3.06
PPP4C-209ENST00000566749 SPATA31A7Q8IWB4 1347 aa34.19■■■■□ 3.06
PPP4C-209ENST00000566749 AATKQ6ZMQ8 1374 aa34.19■■■■□ 3.06
PPP4C-209ENST00000566749 NFAT5O94916 1531 aa34.18■■■■□ 3.06
PPP4C-209ENST00000566749 OVOS2A0A0J9YW53 1432 aa34.16■■■■□ 3.06
PPP4C-209ENST00000566749 OVOS2Q6IE36 1432 aa34.16■■■■□ 3.06
PPP4C-209ENST00000566749 FAM98CQ17RN3 349 aaKnown RBP34.14■■■■□ 3.06
PPP4C-209ENST00000566749 SEPT12Q8IYM1 358 aa34.14■■■■□ 3.06
PPP4C-209ENST00000566749 COG3Q96JB2 828 aa34.14■■■■□ 3.06
PPP4C-209ENST00000566749 A0A0G2JS52 829 aa34.14■■■■□ 3.06
PPP4C-209ENST00000566749 ONECUT3O60422 494 aaPredicted RBP34.14■■■■□ 3.06
PPP4C-209ENST00000566749 MYT1Q01538 1121 aa34.14■■■■□ 3.06
PPP4C-209ENST00000566749 COL5A2P05997 1499 aaPredicted RBP34.13■■■■□ 3.05
PPP4C-209ENST00000566749 SPATA31A1Q5TZJ5 1347 aa34.13■■■■□ 3.05
PPP4C-209ENST00000566749 LARP1Q6PKG0 1096 aaKnown RBP34.13■■■■□ 3.05
PPP4C-209ENST00000566749 COL18A1P39060 1754 aa34.13■■■■□ 3.05
PPP4C-209ENST00000566749 CARD14Q9BXL6 1004 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms