RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 PSME1Q06323 249 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 TEFQ10587 303 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 KIAA1211Q6ZU35 1233 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 MCM10Q7L590 875 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 ABTB2Q8N961 1025 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 WASLO00401 505 aaPredicted RBP14.35□□□□□ -0.11
CDH1-210ENST00000566612 PIK3C2GO75747 1445 aa14.35□□□□□ -0.11
CDH1-210ENST00000566612 BCORL1Q5H9F3 1711 aa14.34□□□□□ -0.11
CDH1-210ENST00000566612 CHMP5Q9NZZ3 219 aa14.34□□□□□ -0.11
CDH1-210ENST00000566612 POLR3AO14802 1390 aaPredicted RBP14.34□□□□□ -0.11
CDH1-210ENST00000566612 FAM83GA6ND36 823 aa14.34□□□□□ -0.11
CDH1-210ENST00000566612 NAP1L5Q96NT1 182 aaPredicted RBP14.34□□□□□ -0.11
CDH1-210ENST00000566612 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
CDH1-210ENST00000566612 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
CDH1-210ENST00000566612 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.34□□□□□ -0.11
CDH1-210ENST00000566612 ATP7AQ04656 1500 aa14.34□□□□□ -0.11
CDH1-210ENST00000566612 CDC42BPAQ5VT25 1732 aa14.34□□□□□ -0.11
CDH1-210ENST00000566612 PTMAP06454 111 aaKnown RBP14.34□□□□□ -0.11
CDH1-210ENST00000566612 ZNF330Q9Y3S2 320 aaPredicted RBP14.34□□□□□ -0.11
CDH1-210ENST00000566612 ANKRD36BQ8N2N9 1353 aa14.33□□□□□ -0.11
CDH1-210ENST00000566612 CHD1LQ86WJ1 897 aa14.33□□□□□ -0.12
CDH1-210ENST00000566612 NCKAP5LQ9HCH0 1330 aa14.32□□□□□ -0.12
CDH1-210ENST00000566612 FGD1P98174 961 aa14.32□□□□□ -0.12
CDH1-210ENST00000566612 ATP10AO60312 1499 aa14.32□□□□□ -0.12
CDH1-210ENST00000566612 ST18O60284 1047 aa14.32□□□□□ -0.12
CDH1-210ENST00000566612 RBM33Q96EV2 1170 aaKnown RBP14.31□□□□□ -0.12
CDH1-210ENST00000566612 BRPF3Q9ULD4 1205 aa14.31□□□□□ -0.12
CDH1-210ENST00000566612 C8orf34Q49A92 452 aa14.31□□□□□ -0.12
CDH1-210ENST00000566612 NAP1L2Q9ULW6 460 aaPredicted RBP14.31□□□□□ -0.12
CDH1-210ENST00000566612 IL27Q8NEV9 243 aa14.31□□□□□ -0.12
CDH1-210ENST00000566612 UGGT1Q9NYU2 1555 aa14.3□□□□□ -0.12
CDH1-210ENST00000566612 ZNF428Q96B54 188 aa14.3□□□□□ -0.12
CDH1-210ENST00000566612 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
CDH1-210ENST00000566612 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
CDH1-210ENST00000566612 BLMP54132 1417 aaPredicted RBP14.29□□□□□ -0.12
CDH1-210ENST00000566612 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
CDH1-210ENST00000566612 POLKQ9UBT6 870 aa14.29□□□□□ -0.12
CDH1-210ENST00000566612 DDX49Q9Y6V7 483 aaKnown RBP14.29□□□□□ -0.12
CDH1-210ENST00000566612 CDC45O75419 566 aa14.28□□□□□ -0.12
CDH1-210ENST00000566612 ANO2Q9NQ90 1003 aa14.28□□□□□ -0.12
CDH1-210ENST00000566612 NSD2O96028 1365 aa14.28□□□□□ -0.12
CDH1-210ENST00000566612 CHMP3Q9Y3E7 222 aa14.28□□□□□ -0.12
CDH1-210ENST00000566612 MYO5CQ9NQX4 1742 aa14.28□□□□□ -0.12
CDH1-210ENST00000566612 KDM5DQ9BY66 1539 aa14.28□□□□□ -0.12
CDH1-210ENST00000566612 SEC24BO95487 1268 aa14.28□□□□□ -0.12
CDH1-210ENST00000566612 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
CDH1-210ENST00000566612 CCDC9Q9Y3X0 531 aaKnown RBP14.28□□□□□ -0.12
CDH1-210ENST00000566612 PREX2Q70Z35 1606 aa14.27□□□□□ -0.12
CDH1-210ENST00000566612 DDX11L8A8MPP1 907 aa14.27□□□□□ -0.12
CDH1-210ENST00000566612 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.12
CDH1-210ENST00000566612 NPC1L1Q9UHC9 1359 aa14.27□□□□□ -0.12
CDH1-210ENST00000566612 REC8O95072 547 aa14.27□□□□□ -0.13
CDH1-210ENST00000566612 C9orf78Q9NZ63 289 aaPredicted RBP14.27□□□□□ -0.13
CDH1-210ENST00000566612 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
CDH1-210ENST00000566612 ZMYM4Q5VZL5 1548 aa14.26□□□□□ -0.13
CDH1-210ENST00000566612 ABCC11Q96J66 1382 aa14.26□□□□□ -0.13
CDH1-210ENST00000566612 THEMISQ8N1K5 641 aaPredicted RBP14.26□□□□□ -0.13
CDH1-210ENST00000566612 MBIPQ9NS73 344 aa14.26□□□□□ -0.13
CDH1-210ENST00000566612 PTPRTO14522 1441 aa14.26□□□□□ -0.13
CDH1-210ENST00000566612 NPATQ14207 1427 aa14.26□□□□□ -0.13
CDH1-210ENST00000566612 CCDC27Q2M243 656 aa14.26□□□□□ -0.13
CDH1-210ENST00000566612 GAS2L2Q8NHY3 880 aa14.26□□□□□ -0.13
CDH1-210ENST00000566612 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
CDH1-210ENST00000566612 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
CDH1-210ENST00000566612 IFT57Q9NWB7 429 aa14.25□□□□□ -0.13
CDH1-210ENST00000566612 XPCQ01831 940 aaPredicted RBP14.25□□□□□ -0.13
CDH1-210ENST00000566612 AMOTL2Q9Y2J4 779 aa14.25□□□□□ -0.13
CDH1-210ENST00000566612 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
CDH1-210ENST00000566612 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
CDH1-210ENST00000566612 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
CDH1-210ENST00000566612 CHD1O14646 1710 aa14.24□□□□□ -0.13
CDH1-210ENST00000566612 KDM2BQ8NHM5 1336 aa14.24□□□□□ -0.13
CDH1-210ENST00000566612 TSPYL6Q8N831 410 aa14.24□□□□□ -0.13
CDH1-210ENST00000566612 F6X3S4 739 aa14.24□□□□□ -0.13
CDH1-210ENST00000566612 TBC1D2Q9BYX2 928 aa14.24□□□□□ -0.13
CDH1-210ENST00000566612 SMARCA5O60264 1052 aaPredicted RBP14.24□□□□□ -0.13
CDH1-210ENST00000566612 UBTFL1P0CB47 393 aaPredicted RBP14.24□□□□□ -0.13
CDH1-210ENST00000566612 CCDC30Q5VVM6 783 aa14.23□□□□□ -0.13
CDH1-210ENST00000566612 ADCY10Q96PN6 1610 aa14.23□□□□□ -0.13
CDH1-210ENST00000566612 DNTTIP2Q5QJE6 756 aaKnown RBP14.23□□□□□ -0.13
CDH1-210ENST00000566612 HDGFL1Q5TGJ6 251 aa14.23□□□□□ -0.13
CDH1-210ENST00000566612 ACEP12821 1306 aa14.23□□□□□ -0.13
CDH1-210ENST00000566612 TRAK2O60296 914 aa14.22□□□□□ -0.13
CDH1-210ENST00000566612 SURF6O75683 361 aaKnown RBP14.22□□□□□ -0.13
CDH1-210ENST00000566612 USHBP1Q8N6Y0 703 aa14.22□□□□□ -0.13
CDH1-210ENST00000566612 C8orf58Q8NAV2 365 aa14.22□□□□□ -0.13
CDH1-210ENST00000566612 ABCC1P33527 1531 aa14.22□□□□□ -0.13
CDH1-210ENST00000566612 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
CDH1-210ENST00000566612 EXOC6BQ9Y2D4 811 aa14.22□□□□□ -0.13
CDH1-210ENST00000566612 GNAI2P04899 355 aa14.21□□□□□ -0.13
CDH1-210ENST00000566612 KRT24Q2M2I5 525 aa14.21□□□□□ -0.13
CDH1-210ENST00000566612 PUS7Q96PZ0 661 aaKnown RBP14.21□□□□□ -0.13
CDH1-210ENST00000566612 GPATCH3Q96I76 525 aa14.21□□□□□ -0.13
CDH1-210ENST00000566612 ERVK-7P63135 1459 aa14.21□□□□□ -0.14
CDH1-210ENST00000566612 GNAI3P08754 354 aa14.21□□□□□ -0.14
CDH1-210ENST00000566612 NLRP2Q9NX02 1062 aa14.21□□□□□ -0.14
CDH1-210ENST00000566612 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms