RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SPATA31A7Q8IWB4 1347 aa18.95■□□□□ 0.62
RNF40-208ENST00000565995 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
RNF40-208ENST00000565995 FAM98CQ17RN3 349 aaKnown RBP18.94■□□□□ 0.62
RNF40-208ENST00000565995 GPRASP1Q5JY77 1395 aa18.93■□□□□ 0.62
RNF40-208ENST00000565995 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
RNF40-208ENST00000565995 RREB1Q92766 1687 aa18.91■□□□□ 0.62
RNF40-208ENST00000565995 WASLO00401 505 aaPredicted RBP18.9■□□□□ 0.62
RNF40-208ENST00000565995 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
RNF40-208ENST00000565995 PSDA5PKW4 1024 aaPredicted RBP18.89■□□□□ 0.61
RNF40-208ENST00000565995 EN1Q05925 392 aaPredicted RBP18.89■□□□□ 0.61
RNF40-208ENST00000565995 STAC3Q96MF2 364 aa18.89■□□□□ 0.61
RNF40-208ENST00000565995 TOPAZ1Q8N9V7 1692 aa18.89■□□□□ 0.61
RNF40-208ENST00000565995 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
RNF40-208ENST00000565995 A0A0G2JS52 829 aa18.87■□□□□ 0.61
RNF40-208ENST00000565995 MYT1Q01538 1121 aa18.87■□□□□ 0.61
RNF40-208ENST00000565995 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
RNF40-208ENST00000565995 SPATA31A1Q5TZJ5 1347 aa18.86■□□□□ 0.61
RNF40-208ENST00000565995 MINK1Q8N4C8 1332 aaPredicted RBP18.86■□□□□ 0.61
RNF40-208ENST00000565995 NUP188Q5SRE5 1749 aa18.86■□□□□ 0.61
RNF40-208ENST00000565995 ATP7BP35670 1465 aa18.85■□□□□ 0.61
RNF40-208ENST00000565995 KIAA1210Q9ULL0 1709 aa18.85■□□□□ 0.61
RNF40-208ENST00000565995 SBF2Q86WG5 1849 aa18.84■□□□□ 0.61
RNF40-208ENST00000565995 FAM182BQ5T319 152 aa18.84■□□□□ 0.61
RNF40-208ENST00000565995 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
RNF40-208ENST00000565995 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
RNF40-208ENST00000565995 PARD3Q8TEW0 1356 aa18.83■□□□□ 0.61
RNF40-208ENST00000565995 LMO7Q8WWI1 1683 aa18.83■□□□□ 0.61
RNF40-208ENST00000565995 PRDM11Q9NQV5 511 aa18.83■□□□□ 0.6
RNF40-208ENST00000565995 FAM196AQ6ZSG2 479 aa18.82■□□□□ 0.6
RNF40-208ENST00000565995 PARP4Q9UKK3 1724 aaKnown RBP18.82■□□□□ 0.6
RNF40-208ENST00000565995 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
RNF40-208ENST00000565995 R3HDM1Q15032 1099 aaKnown RBP18.81■□□□□ 0.6
RNF40-208ENST00000565995 EZH2Q15910 746 aaKnown RBP18.81■□□□□ 0.6
RNF40-208ENST00000565995 POLR3AO14802 1390 aaPredicted RBP18.81■□□□□ 0.6
RNF40-208ENST00000565995 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
RNF40-208ENST00000565995 PAK3O75914 559 aaPredicted RBP18.8■□□□□ 0.6
RNF40-208ENST00000565995 DCAF11Q8TEB1 546 aa18.8■□□□□ 0.6
RNF40-208ENST00000565995 NUDT16Q96DE0 195 aaKnown RBP18.8■□□□□ 0.6
RNF40-208ENST00000565995 RGPD3A6NKT7 1758 aaPredicted RBP18.8■□□□□ 0.6
RNF40-208ENST00000565995 RGPD4Q7Z3J3 1758 aa18.8■□□□□ 0.6
RNF40-208ENST00000565995 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
RNF40-208ENST00000565995 BARGINQ6ZT62 677 aa18.79■□□□□ 0.6
RNF40-208ENST00000565995 CAMTA1Q9Y6Y1 1673 aa18.79■□□□□ 0.6
RNF40-208ENST00000565995 TRIM37O94972 964 aa18.77■□□□□ 0.6
RNF40-208ENST00000565995 KDM2AQ9Y2K7 1162 aa18.77■□□□□ 0.6
RNF40-208ENST00000565995 SSH2Q76I76 1423 aa18.76■□□□□ 0.59
RNF40-208ENST00000565995 CPDO75976 1380 aa18.76■□□□□ 0.59
RNF40-208ENST00000565995 PEAK1Q9H792 1746 aa18.75■□□□□ 0.59
RNF40-208ENST00000565995 PLEKHG3A1L390 1219 aa18.75■□□□□ 0.59
RNF40-208ENST00000565995 CHRNA2Q15822 529 aa18.75■□□□□ 0.59
RNF40-208ENST00000565995 NBPF8Q3BBV2 869 aa18.74■□□□□ 0.59
RNF40-208ENST00000565995 CDK19Q9BWU1 502 aa18.74■□□□□ 0.59
RNF40-208ENST00000565995 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
RNF40-208ENST00000565995 ACEP12821 1306 aa18.74■□□□□ 0.59
RNF40-208ENST00000565995 APBA3O96018 575 aa18.73■□□□□ 0.59
RNF40-208ENST00000565995 ZC3H6P61129 1189 aaKnown RBP18.73■□□□□ 0.59
RNF40-208ENST00000565995 STRN4Q9NRL3 753 aa18.73■□□□□ 0.59
RNF40-208ENST00000565995 CCDC61Q9Y6R9 512 aa18.73■□□□□ 0.59
RNF40-208ENST00000565995 THRAP3Q9Y2W1 955 aaKnown RBP18.72■□□□□ 0.59
RNF40-208ENST00000565995 USP19O94966 1318 aa18.72■□□□□ 0.59
RNF40-208ENST00000565995 COL18A1P39060 1754 aa18.71■□□□□ 0.59
RNF40-208ENST00000565995 EVA1CP58658 441 aa18.7■□□□□ 0.58
RNF40-208ENST00000565995 PDE3BQ13370 1112 aa18.7■□□□□ 0.58
RNF40-208ENST00000565995 TCP11L2Q8N4U5 519 aa18.7■□□□□ 0.58
RNF40-208ENST00000565995 AKAP12Q02952 1782 aa18.7■□□□□ 0.58
RNF40-208ENST00000565995 RGPD5Q99666 1765 aa18.69■□□□□ 0.58
RNF40-208ENST00000565995 C11orf95C9JLR9 678 aaPredicted RBP18.69■□□□□ 0.58
RNF40-208ENST00000565995 LARP1Q6PKG0 1096 aaKnown RBP18.69■□□□□ 0.58
RNF40-208ENST00000565995 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
RNF40-208ENST00000565995 NUTM2GQ5VZR2 741 aa18.68■□□□□ 0.58
RNF40-208ENST00000565995 ABTB2Q8N961 1025 aa18.68■□□□□ 0.58
RNF40-208ENST00000565995 CASZ1Q86V15 1759 aa18.68■□□□□ 0.58
RNF40-208ENST00000565995 COL5A2P05997 1499 aaPredicted RBP18.67■□□□□ 0.58
RNF40-208ENST00000565995 NBPF14Q5TI25 921 aa18.67■□□□□ 0.58
RNF40-208ENST00000565995 USP35Q9P2H5 1018 aa18.67■□□□□ 0.58
RNF40-208ENST00000565995 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
RNF40-208ENST00000565995 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
RNF40-208ENST00000565995 GCP02774 474 aa18.65■□□□□ 0.58
RNF40-208ENST00000565995 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
RNF40-208ENST00000565995 CRB1P82279 1406 aa18.64■□□□□ 0.57
RNF40-208ENST00000565995 SLIT3O75094 1523 aa18.64■□□□□ 0.57
RNF40-208ENST00000565995 PLSCR1O15162 318 aa18.62■□□□□ 0.57
RNF40-208ENST00000565995 PPIP5K1Q6PFW1 1433 aa18.62■□□□□ 0.57
RNF40-208ENST00000565995 PIK3C2AO00443 1686 aa18.62■□□□□ 0.57
RNF40-208ENST00000565995 CHD4Q14839 1912 aa18.61■□□□□ 0.57
RNF40-208ENST00000565995 OVOS2A0A0G2JMS6 1433 aa18.61■□□□□ 0.57
RNF40-208ENST00000565995 OVOS2A0A0J9YW53 1432 aa18.61■□□□□ 0.57
RNF40-208ENST00000565995 OVOS2Q6IE36 1432 aa18.61■□□□□ 0.57
RNF40-208ENST00000565995 AATKQ6ZMQ8 1374 aa18.61■□□□□ 0.57
RNF40-208ENST00000565995 KCNQ2O43526 872 aa18.61■□□□□ 0.57
RNF40-208ENST00000565995 SPON1Q9HCB6 807 aa18.61■□□□□ 0.57
RNF40-208ENST00000565995 BCL9O00512 1426 aa18.59■□□□□ 0.57
RNF40-208ENST00000565995 NINLQ9Y2I6 1382 aa18.59■□□□□ 0.57
RNF40-208ENST00000565995 YY1P25490 414 aa18.58■□□□□ 0.56
RNF40-208ENST00000565995 NBPF1Q3BBV0 1214 aa18.58■□□□□ 0.56
RNF40-208ENST00000565995 USP6P35125 1406 aa18.57■□□□□ 0.56
RNF40-208ENST00000565995 CENPJQ9HC77 1338 aaPredicted RBP18.55■□□□□ 0.56
RNF40-208ENST00000565995 SRPK2P78362 688 aaKnown RBP18.55■□□□□ 0.56
RNF40-208ENST00000565995 BCL11BQ9C0K0 894 aaPredicted RBP18.55■□□□□ 0.56
RNF40-208ENST00000565995 TRPM1Q7Z4N2 1603 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms