RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
VPS9D1-205ENST00000565452 PLSCR1O15162 318 aa13.64□□□□□ -0.23
VPS9D1-205ENST00000565452 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-205ENST00000565452 SYT17Q9BSW7 474 aa13.64□□□□□ -0.23
VPS9D1-205ENST00000565452 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-205ENST00000565452 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-205ENST00000565452 ANKRD30BQ9BXX2 1392 aa13.62□□□□□ -0.23
VPS9D1-205ENST00000565452 ZBTB7AO95365 584 aa13.62□□□□□ -0.23
VPS9D1-205ENST00000565452 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
VPS9D1-205ENST00000565452 CHRNA2Q15822 529 aa13.62□□□□□ -0.23
VPS9D1-205ENST00000565452 POGKQ9P215 609 aa13.62□□□□□ -0.23
VPS9D1-205ENST00000565452 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-205ENST00000565452 KIF1BO60333 1816 aa13.62□□□□□ -0.23
VPS9D1-205ENST00000565452 PTGER2P43116 358 aa13.61□□□□□ -0.23
VPS9D1-205ENST00000565452 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
VPS9D1-205ENST00000565452 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-205ENST00000565452 FHDC1Q9C0D6 1143 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-205ENST00000565452 BCL11BQ9C0K0 894 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-205ENST00000565452 YTHDC2Q9H6S0 1430 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-205ENST00000565452 DHX57Q6P158 1386 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-205ENST00000565452 ZC3H6P61129 1189 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-205ENST00000565452 PRAM1Q96QH2 718 aa13.6□□□□□ -0.23
VPS9D1-205ENST00000565452 THRAP3Q9Y2W1 955 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-205ENST00000565452 COL14A1Q05707 1796 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-205ENST00000565452 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-205ENST00000565452 TNS1Q9HBL0 1735 aaKnown RBP13.59□□□□□ -0.23
VPS9D1-205ENST00000565452 C14orf93Q9H972 538 aaKnown RBP13.59□□□□□ -0.23
VPS9D1-205ENST00000565452 KIAA0232Q92628 1395 aa13.58□□□□□ -0.23
VPS9D1-205ENST00000565452 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
VPS9D1-205ENST00000565452 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
VPS9D1-205ENST00000565452 ANKARQ7Z5J8 1434 aa13.57□□□□□ -0.24
VPS9D1-205ENST00000565452 GPR162Q16538 588 aa13.57□□□□□ -0.24
VPS9D1-205ENST00000565452 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
VPS9D1-205ENST00000565452 PDGFDQ9GZP0 370 aaPredicted RBP13.57□□□□□ -0.24
VPS9D1-205ENST00000565452 STK32BQ9NY57 414 aa13.57□□□□□ -0.24
VPS9D1-205ENST00000565452 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
VPS9D1-205ENST00000565452 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
VPS9D1-205ENST00000565452 UTRNP46939 3433 aa13.55□□□□□ -0.24
VPS9D1-205ENST00000565452 MTFR1LQ9H019 292 aa13.55□□□□□ -0.24
VPS9D1-205ENST00000565452 SLC15A2Q16348 729 aa13.54□□□□□ -0.24
VPS9D1-205ENST00000565452 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
VPS9D1-205ENST00000565452 PROM2Q8N271 834 aa13.54□□□□□ -0.24
VPS9D1-205ENST00000565452 ARXQ96QS3 562 aa13.54□□□□□ -0.24
VPS9D1-205ENST00000565452 EIF3AQ14152 1382 aaKnown RBP13.53□□□□□ -0.24
VPS9D1-205ENST00000565452 CAMTA1Q9Y6Y1 1673 aa13.53□□□□□ -0.24
VPS9D1-205ENST00000565452 HIRIP3Q9BW71 556 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-205ENST00000565452 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
VPS9D1-205ENST00000565452 NUP188Q5SRE5 1749 aa13.51□□□□□ -0.25
VPS9D1-205ENST00000565452 RREB1Q92766 1687 aa13.51□□□□□ -0.25
VPS9D1-205ENST00000565452 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
VPS9D1-205ENST00000565452 DDB1Q16531 1140 aa13.51□□□□□ -0.25
VPS9D1-205ENST00000565452 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
VPS9D1-205ENST00000565452 PPLO60437 1756 aa13.5□□□□□ -0.25
VPS9D1-205ENST00000565452 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
VPS9D1-205ENST00000565452 SGIP1Q9BQI5 828 aa13.5□□□□□ -0.25
VPS9D1-205ENST00000565452 CEP350Q5VT06 3117 aa13.5□□□□□ -0.25
VPS9D1-205ENST00000565452 ABCA3Q99758 1704 aa13.5□□□□□ -0.25
VPS9D1-205ENST00000565452 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-205ENST00000565452 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
VPS9D1-205ENST00000565452 TXNRD1Q16881 649 aa13.49□□□□□ -0.25
VPS9D1-205ENST00000565452 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
VPS9D1-205ENST00000565452 OVOS2A0A0J9YW53 1432 aa13.48□□□□□ -0.25
VPS9D1-205ENST00000565452 OVOS2Q6IE36 1432 aa13.48□□□□□ -0.25
VPS9D1-205ENST00000565452 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
VPS9D1-205ENST00000565452 TRAK1Q9UPV9 953 aa13.48□□□□□ -0.25
VPS9D1-205ENST00000565452 NRKQ7Z2Y5 1582 aa13.48□□□□□ -0.25
VPS9D1-205ENST00000565452 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-205ENST00000565452 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
VPS9D1-205ENST00000565452 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
VPS9D1-205ENST00000565452 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-205ENST00000565452 NUDT16Q96DE0 195 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-205ENST00000565452 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
VPS9D1-205ENST00000565452 KNDC1Q76NI1 1749 aa13.45□□□□□ -0.26
VPS9D1-205ENST00000565452 GRIN3BO60391 1043 aa13.45□□□□□ -0.26
VPS9D1-205ENST00000565452 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
VPS9D1-205ENST00000565452 CDCA7Q9BWT1 371 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-205ENST00000565452 GCP02774 474 aa13.44□□□□□ -0.26
VPS9D1-205ENST00000565452 MARCH10Q8NA82 808 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-205ENST00000565452 CPDO75976 1380 aa13.44□□□□□ -0.26
VPS9D1-205ENST00000565452 ALS2Q96Q42 1657 aa13.44□□□□□ -0.26
VPS9D1-205ENST00000565452 HSPA6P17066 643 aa13.43□□□□□ -0.26
VPS9D1-205ENST00000565452 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
VPS9D1-205ENST00000565452 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-205ENST00000565452 DLC1Q96QB1 1528 aa13.43□□□□□ -0.26
VPS9D1-205ENST00000565452 CHD4Q14839 1912 aa13.43□□□□□ -0.26
VPS9D1-205ENST00000565452 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
VPS9D1-205ENST00000565452 POLD1P28340 1107 aa13.42□□□□□ -0.26
VPS9D1-205ENST00000565452 PPARGC1BQ86YN6 1023 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-205ENST00000565452 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
VPS9D1-205ENST00000565452 MPHOSPH9Q99550 1183 aa13.42□□□□□ -0.26
VPS9D1-205ENST00000565452 CRB1P82279 1406 aa13.41□□□□□ -0.26
VPS9D1-205ENST00000565452 ZBTB7CA1YPR0 619 aa13.41□□□□□ -0.26
VPS9D1-205ENST00000565452 EXOC5O00471 708 aa13.41□□□□□ -0.26
VPS9D1-205ENST00000565452 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
VPS9D1-205ENST00000565452 MYOM1P52179 1685 aa13.4□□□□□ -0.26
VPS9D1-205ENST00000565452 ACEP12821 1306 aa13.4□□□□□ -0.26
VPS9D1-205ENST00000565452 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
VPS9D1-205ENST00000565452 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
VPS9D1-205ENST00000565452 BCL9O00512 1426 aa13.39□□□□□ -0.27
VPS9D1-205ENST00000565452 CDK19Q9BWU1 502 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms