RNA–Protein interactions for RNA: ENST00000565351.5

KIFC3-220, Transcript of kinesin family member C3, humanhuman

TSL 1 (best)

Gene KIFC3, Length 297 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-220ENST00000565351 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
KIFC3-220ENST00000565351 RBM33Q96EV2 1170 aaKnown RBP16.45■□□□□ 0.22
KIFC3-220ENST00000565351 YTHDC1Q96MU7 727 aaKnown RBP16.45■□□□□ 0.22
KIFC3-220ENST00000565351 C1orf167Q5SNV9 1468 aa16.45■□□□□ 0.22
KIFC3-220ENST00000565351 USP54Q70EL1 1684 aa16.44■□□□□ 0.22
KIFC3-220ENST00000565351 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
KIFC3-220ENST00000565351 CADPS2Q86UW7 1296 aa16.44■□□□□ 0.22
KIFC3-220ENST00000565351 NGDNQ8NEJ9 315 aaKnown RBP16.44■□□□□ 0.22
KIFC3-220ENST00000565351 OVOS2A0A0J9YW53 1432 aa16.44■□□□□ 0.22
KIFC3-220ENST00000565351 MST1RQ04912 1400 aa16.44■□□□□ 0.22
KIFC3-220ENST00000565351 OVOS2Q6IE36 1432 aa16.44■□□□□ 0.22
KIFC3-220ENST00000565351 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
KIFC3-220ENST00000565351 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
KIFC3-220ENST00000565351 FAM9BQ8IZU0 186 aa16.43■□□□□ 0.22
KIFC3-220ENST00000565351 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
KIFC3-220ENST00000565351 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
KIFC3-220ENST00000565351 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
KIFC3-220ENST00000565351 MSH6P52701 1360 aa16.42■□□□□ 0.22
KIFC3-220ENST00000565351 ATF3P18847 181 aa16.42■□□□□ 0.22
KIFC3-220ENST00000565351 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
KIFC3-220ENST00000565351 MTHFSP49914 203 aa16.41■□□□□ 0.22
KIFC3-220ENST00000565351 NME9Q86XW9 330 aa16.41■□□□□ 0.22
KIFC3-220ENST00000565351 COG3Q96JB2 828 aa16.41■□□□□ 0.22
KIFC3-220ENST00000565351 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
KIFC3-220ENST00000565351 BLMP54132 1417 aaPredicted RBP16.38■□□□□ 0.21
KIFC3-220ENST00000565351 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
KIFC3-220ENST00000565351 PIK3C2AO00443 1686 aa16.37■□□□□ 0.21
KIFC3-220ENST00000565351 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
KIFC3-220ENST00000565351 ORAI2Q96SN7 254 aa16.37■□□□□ 0.21
KIFC3-220ENST00000565351 POLKQ9UBT6 870 aa16.37■□□□□ 0.21
KIFC3-220ENST00000565351 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
KIFC3-220ENST00000565351 SHPRHQ149N8 1683 aa16.37■□□□□ 0.21
KIFC3-220ENST00000565351 MAP2P11137 1827 aaKnown RBP16.36■□□□□ 0.21
KIFC3-220ENST00000565351 HNRNPUQ00839 825 aaKnown RBP eCLIP16.36■□□□□ 0.21
KIFC3-220ENST00000565351 ADAMTS8Q9UP79 889 aa16.36■□□□□ 0.21
KIFC3-220ENST00000565351 LTBP4Q8N2S1 1624 aa16.35■□□□□ 0.21
KIFC3-220ENST00000565351 TNNT2P45379 298 aaPredicted RBP16.35■□□□□ 0.21
KIFC3-220ENST00000565351 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
KIFC3-220ENST00000565351 TRPM3Q9HCF6 1732 aaPredicted RBP16.34■□□□□ 0.21
KIFC3-220ENST00000565351 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
KIFC3-220ENST00000565351 PSME1Q06323 249 aa16.34■□□□□ 0.21
KIFC3-220ENST00000565351 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
KIFC3-220ENST00000565351 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
KIFC3-220ENST00000565351 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
KIFC3-220ENST00000565351 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
KIFC3-220ENST00000565351 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
KIFC3-220ENST00000565351 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
KIFC3-220ENST00000565351 FOXO3O43524 673 aa16.31■□□□□ 0.2
KIFC3-220ENST00000565351 SLAIN2Q9P270 581 aa16.31■□□□□ 0.2
KIFC3-220ENST00000565351 NPHP3Q7Z494 1330 aa16.3■□□□□ 0.2
KIFC3-220ENST00000565351 NLRP6P59044 892 aa16.3■□□□□ 0.2
KIFC3-220ENST00000565351 KRT28Q7Z3Y7 464 aa16.3■□□□□ 0.2
KIFC3-220ENST00000565351 ABTB2Q8N961 1025 aa16.3■□□□□ 0.2
KIFC3-220ENST00000565351 NUDCQ9Y266 331 aa16.29■□□□□ 0.2
KIFC3-220ENST00000565351 ALS2Q96Q42 1657 aa16.29■□□□□ 0.2
KIFC3-220ENST00000565351 DIAPH1O60610 1272 aaKnown RBP16.28■□□□□ 0.2
KIFC3-220ENST00000565351 BRINP3Q76B58 766 aa16.28■□□□□ 0.2
KIFC3-220ENST00000565351 PXDNQ92626 1479 aa16.28■□□□□ 0.2
KIFC3-220ENST00000565351 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.2
KIFC3-220ENST00000565351 USP19O94966 1318 aa16.27■□□□□ 0.2
KIFC3-220ENST00000565351 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
KIFC3-220ENST00000565351 SLIT3O75094 1523 aa16.27■□□□□ 0.2
KIFC3-220ENST00000565351 FBLN1P23142 703 aa16.26■□□□□ 0.19
KIFC3-220ENST00000565351 KCNH5Q8NCM2 988 aa16.26■□□□□ 0.19
KIFC3-220ENST00000565351 NFAT5O94916 1531 aa16.25■□□□□ 0.19
KIFC3-220ENST00000565351 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
KIFC3-220ENST00000565351 IL13P35225 146 aa16.25■□□□□ 0.19
KIFC3-220ENST00000565351 PEAK1Q9H792 1746 aa16.25■□□□□ 0.19
KIFC3-220ENST00000565351 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
KIFC3-220ENST00000565351 FCHSD2O94868 740 aa16.24■□□□□ 0.19
KIFC3-220ENST00000565351 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
KIFC3-220ENST00000565351 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
KIFC3-220ENST00000565351 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
KIFC3-220ENST00000565351 RTL1A6NKG5 1358 aa16.24■□□□□ 0.19
KIFC3-220ENST00000565351 FLT4P35916 1363 aa16.24■□□□□ 0.19
KIFC3-220ENST00000565351 MAP3K19Q56UN5 1328 aa16.23■□□□□ 0.19
KIFC3-220ENST00000565351 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
KIFC3-220ENST00000565351 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
KIFC3-220ENST00000565351 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
KIFC3-220ENST00000565351 TNS3Q68CZ2 1445 aa16.22■□□□□ 0.19
KIFC3-220ENST00000565351 NHSL1Q5SYE7 1610 aa16.22■□□□□ 0.19
KIFC3-220ENST00000565351 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
KIFC3-220ENST00000565351 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
KIFC3-220ENST00000565351 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
KIFC3-220ENST00000565351 PLEKHF1Q96S99 279 aa16.21■□□□□ 0.19
KIFC3-220ENST00000565351 ARHGEF10O15013 1369 aa16.21■□□□□ 0.19
KIFC3-220ENST00000565351 IQSEC2Q5JU85 1478 aa16.21■□□□□ 0.19
KIFC3-220ENST00000565351 RGPD1P0DJD0 1748 aa16.2■□□□□ 0.18
KIFC3-220ENST00000565351 GCP02774 474 aa16.2■□□□□ 0.18
KIFC3-220ENST00000565351 PPM1GO15355 546 aaPredicted RBP16.19■□□□□ 0.18
KIFC3-220ENST00000565351 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
KIFC3-220ENST00000565351 APAF1O14727 1248 aa16.18■□□□□ 0.18
KIFC3-220ENST00000565351 HOXC9P31274 260 aa16.18■□□□□ 0.18
KIFC3-220ENST00000565351 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
KIFC3-220ENST00000565351 EIF4A2Q14240 407 aaKnown RBP16.18■□□□□ 0.18
KIFC3-220ENST00000565351 HSP90AB2PQ58FF8 381 aa16.18■□□□□ 0.18
KIFC3-220ENST00000565351 NUTM2GQ5VZR2 741 aa16.18■□□□□ 0.18
KIFC3-220ENST00000565351 ARHGEF25Q86VW2 580 aa16.18■□□□□ 0.18
KIFC3-220ENST00000565351 IP6K1Q92551 441 aa16.18■□□□□ 0.18
KIFC3-220ENST00000565351 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms