RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	GNL2	Q13823	731 aa	Known RBP	5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	TDO2	P48775	406 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	LIG1	P18858	919 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	MNAT1	P51948	309 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	GSDMD	P57764	484 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	HSP90AB3P	Q58FF7	597 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	CFAP45	Q9UL16	551 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	SYCP1	Q15431	976 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	GPATCH11	Q8N954	259 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	ABCA10	Q8WWZ4	1543 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	ATP6V1A	P38606	617 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	CCAR2	Q8N163	923 aa	Known RBP	5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	SDF4	Q9BRK5	362 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	CAGE1	Q8TC20	777 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	ADCY5	O95622	1261 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	LUZP1	Q86V48	1076 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	TNPO1	Q92973	898 aa	Known RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	ARFGAP3	Q9NP61	516 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	GPATCH3	Q96I76	525 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	BIVM-ERCC5	R4GMW8	1640 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	SLFN5	Q08AF3	891 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	PSMA5	P28066	241 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	AEBP2	Q6ZN18	517 aa	Predicted RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	PLCD3	Q8N3E9	789 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	SPDYE4	A6NLX3	237 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	PDZRN3	Q9UPQ7	1066 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	COG6	Q9Y2V7	657 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	ADAMTS8	Q9UP79	889 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	ZSCAN12	O43309	604 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	SF3A1	Q15459	793 aa	Known RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	TRDN	Q13061	729 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	DYDC1	Q8WWB3	177 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	TACO1	Q9BSH4	297 aa	Known RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	GOLGA6L7	A0A1B0GV03	622 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	ZKSCAN1	P17029	563 aa	Predicted RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	XPC	Q01831	940 aa	Predicted RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	PPP6R1	Q9UPN7	881 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	LRSAM1	Q6UWE0	723 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	NUTM1	Q86Y26	1132 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	CCDC191	Q8NCU4	936 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	KIF1C	O43896	1103 aa	Known RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	EPB41L2	O43491	1005 aa	Known RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	DNAJC21	Q5F1R6	531 aa	Known RBP	5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	RNF214	Q8ND24	703 aa		5.06	□□□□□ -1.6
MACF1-231	ENST00000564288	EIF2AK4	Q9P2K8	1649 aa	Known RBP	5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	ANKRD20A12P	Q8NF67	263 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	GOLGA6L9	A6NEM1	432 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	PLCD4	Q9BRC7	762 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	ITPRIP	Q8IWB1	547 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	SMC3	Q9UQE7	1217 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	APAF1	O14727	1248 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	FMNL3	Q8IVF7	1028 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	ERCC3	P19447	782 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	USP47	Q96K76	1375 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	MX1	P20591	662 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	NEK4	P51957	841 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	CCDC183	Q5T5S1	534 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	NEUROD2	Q15784	382 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	RGL3	Q3MIN7	710 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	BAG4	O95429	457 aa	Known RBP	5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	ZRSR2	Q15696	482 aa	Known RBP	5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	AEBP1	Q8IUX7	1158 aa		5.05	□□□□□ -1.6
MACF1-231	ENST00000564288	TTC31	Q49AM3	519 aa	Predicted RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	EBAG9	O00559	213 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CECR2	Q9BXF3	1484 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	ST20-MTHFS	A0A0A6YYL1	179 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	SOS1	Q07889	1333 aa	Predicted RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	NEFH	P12036	1026 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	NOC3L	Q8WTT2	800 aa	Known RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	YEATS2	Q9ULM3	1422 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CDC45	O75419	566 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	INCENP	Q9NQS7	918 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	KAT6B	Q8WYB5	2073 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	HDAC1	Q13547	482 aa	Predicted RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CEP135	Q66GS9	1140 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	PIBF1	Q8WXW3	757 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	API5	Q9BZZ5	524 aa	Known RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CBFA2T2	O43439	604 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CPSF2	Q9P2I0	782 aa	Known RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	SYNJ1	O43426	1573 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CDCA7L	Q96GN5	454 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CCDC172	P0C7W6	258 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	ZNF396	Q96N95	335 aa	Predicted RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	SARNP	P82979	210 aa	Known RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	CNPY4	Q8N129	248 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	PRDM10	Q9NQV6	1147 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	UTP14A	Q9BVJ6	771 aa	Known RBP	5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	MAP2K2	P36507	400 aa		5.04	□□□□□ -1.6
MACF1-231	ENST00000564288	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.03	□□□□□ -1.6
MACF1-231	ENST00000564288	TMCO5B	A8MYB1	307 aa		5.03	□□□□□ -1.6
MACF1-231	ENST00000564288	IPO7	O95373	1038 aa	Known RBP	5.03	□□□□□ -1.6
MACF1-231	ENST00000564288	ZNF397	Q8NF99	534 aa	Predicted RBP	5.03	□□□□□ -1.6
MACF1-231	ENST00000564288	LRCH2	Q5VUJ6	765 aa		5.03	□□□□□ -1.6
MACF1-231	ENST00000564288	ANKRD1	Q15327	319 aa		5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms