RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HMX1Q9NP08 348 aaPredicted RBP10.31□□□□□ -0.76
LINC00254-201ENST00000563416 ZC3H4Q9UPT8 1303 aaKnown RBP10.31□□□□□ -0.76
LINC00254-201ENST00000563416 SH3BP2P78314 561 aa10.3□□□□□ -0.76
LINC00254-201ENST00000563416 FOXC1Q12948 553 aa10.3□□□□□ -0.76
LINC00254-201ENST00000563416 IRX2Q9BZI1 471 aaPredicted RBP10.3□□□□□ -0.76
LINC00254-201ENST00000563416 FKBPLQ9UIM3 349 aa10.3□□□□□ -0.76
LINC00254-201ENST00000563416 WNT7AO00755 349 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 PRR20EP86478 221 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 PRR20CP86479 221 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 PRR20DP86480 221 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 PRR20BP86481 221 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 PRR20AP86496 221 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 LAPTM4AQ15012 233 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 PRM3Q9NNZ6 103 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 PDZRN3Q9UPQ7 1066 aa10.29□□□□□ -0.76
LINC00254-201ENST00000563416 GDF9O60383 454 aa10.28□□□□□ -0.76
LINC00254-201ENST00000563416 SKOR1P84550 965 aa10.28□□□□□ -0.76
LINC00254-201ENST00000563416 AGERQ15109 404 aa10.28□□□□□ -0.76
LINC00254-201ENST00000563416 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
LINC00254-201ENST00000563416 BPHLQ86WA6 291 aaPredicted RBP10.28□□□□□ -0.76
LINC00254-201ENST00000563416 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
LINC00254-201ENST00000563416 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
LINC00254-201ENST00000563416 GFRA3O60609 400 aa10.26□□□□□ -0.77
LINC00254-201ENST00000563416 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
LINC00254-201ENST00000563416 PKD2L1Q9P0L9 805 aa10.26□□□□□ -0.77
LINC00254-201ENST00000563416 TNFRSF10AO00220 468 aa10.25□□□□□ -0.77
LINC00254-201ENST00000563416 VARSP26640 1264 aaKnown RBP10.25□□□□□ -0.77
LINC00254-201ENST00000563416 FLIIQ13045 1269 aa10.25□□□□□ -0.77
LINC00254-201ENST00000563416 PDXDC2PQ6P474 469 aa10.25□□□□□ -0.77
LINC00254-201ENST00000563416 CYP4X1Q8N118 509 aa10.25□□□□□ -0.77
LINC00254-201ENST00000563416 EPS8L1Q8TE68 723 aa10.25□□□□□ -0.77
LINC00254-201ENST00000563416 GJD4Q96KN9 370 aaPredicted RBP10.25□□□□□ -0.77
LINC00254-201ENST00000563416 MRGPRX2Q96LB1 330 aa10.25□□□□□ -0.77
LINC00254-201ENST00000563416 TRIM34Q9BYJ4 488 aa10.25□□□□□ -0.77
LINC00254-201ENST00000563416 NDUFB9Q9Y6M9 179 aa10.25□□□□□ -0.77
LINC00254-201ENST00000563416 TRIM67Q6ZTA4 783 aa10.24□□□□□ -0.77
LINC00254-201ENST00000563416 NRG2O14511 850 aaPredicted RBP10.23□□□□□ -0.77
LINC00254-201ENST00000563416 PTK2Q05397 1052 aa10.23□□□□□ -0.77
LINC00254-201ENST00000563416 GPSM3Q9Y4H4 160 aa10.23□□□□□ -0.77
LINC00254-201ENST00000563416 TTC24A2A3L6 582 aaPredicted RBP10.22□□□□□ -0.77
LINC00254-201ENST00000563416 MCM6Q14566 821 aa10.22□□□□□ -0.77
LINC00254-201ENST00000563416 FAM174AQ8TBP5 190 aa10.22□□□□□ -0.77
LINC00254-201ENST00000563416 FOXJ1Q92949 421 aa10.22□□□□□ -0.77
LINC00254-201ENST00000563416 SH3BP5LQ7L8J4 393 aa10.21□□□□□ -0.77
LINC00254-201ENST00000563416 SH3RF1Q7Z6J0 888 aa10.21□□□□□ -0.77
LINC00254-201ENST00000563416 SNIP1Q8TAD8 396 aaKnown RBP10.21□□□□□ -0.77
LINC00254-201ENST00000563416 ARHGAP9Q9BRR9 750 aa10.21□□□□□ -0.77
LINC00254-201ENST00000563416 MAGEB6P1A0A0J9YX57 407 aa10.2□□□□□ -0.78
LINC00254-201ENST00000563416 ZBTB33Q86T24 672 aa10.19□□□□□ -0.78
LINC00254-201ENST00000563416 TOR4AQ9NXH8 423 aa10.19□□□□□ -0.78
LINC00254-201ENST00000563416 CARD14Q9BXL6 1004 aa10.18□□□□□ -0.78
LINC00254-201ENST00000563416 SIAH2O43255 324 aa10.17□□□□□ -0.78
LINC00254-201ENST00000563416 C4orf48Q5BLP8 95 aa10.17□□□□□ -0.78
LINC00254-201ENST00000563416 MPNDQ8N594 471 aa10.17□□□□□ -0.78
LINC00254-201ENST00000563416 FAM187AA6NFU0 413 aa10.16□□□□□ -0.78
LINC00254-201ENST00000563416 ALDH1A1P00352 501 aa10.16□□□□□ -0.78
LINC00254-201ENST00000563416 PKDCCQ504Y2 493 aa10.16□□□□□ -0.78
LINC00254-201ENST00000563416 ZBBXA8MT70 800 aa10.15□□□□□ -0.78
LINC00254-201ENST00000563416 TRMT44Q8IYL2 757 aaKnown RBP10.15□□□□□ -0.78
LINC00254-201ENST00000563416 C1QTNF2Q9BXJ5 285 aa10.15□□□□□ -0.78
LINC00254-201ENST00000563416 TBC1D2BQ9UPU7 963 aa10.15□□□□□ -0.78
LINC00254-201ENST00000563416 ZNF330Q9Y3S2 320 aaPredicted RBP10.15□□□□□ -0.78
LINC00254-201ENST00000563416 WASF2Q9Y6W5 498 aa10.15□□□□□ -0.78
LINC00254-201ENST00000563416 RAD21O60216 631 aa10.14□□□□□ -0.79
LINC00254-201ENST00000563416 DGAT1O75907 488 aa10.14□□□□□ -0.79
LINC00254-201ENST00000563416 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
LINC00254-201ENST00000563416 ERFEQ4G0M1 354 aa10.14□□□□□ -0.79
LINC00254-201ENST00000563416 ZNF592Q92610 1267 aa10.14□□□□□ -0.79
LINC00254-201ENST00000563416 SLC10A4Q96EP9 437 aa10.14□□□□□ -0.79
LINC00254-201ENST00000563416 CDV3Q9UKY7 258 aaKnown RBP10.14□□□□□ -0.79
LINC00254-201ENST00000563416 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
LINC00254-201ENST00000563416 ARID5BQ14865 1188 aa10.13□□□□□ -0.79
LINC00254-201ENST00000563416 WWC1Q8IX03 1113 aa10.13□□□□□ -0.79
LINC00254-201ENST00000563416 ADAM32Q8TC27 787 aa10.13□□□□□ -0.79
LINC00254-201ENST00000563416 CDK15Q96Q40 435 aa10.13□□□□□ -0.79
LINC00254-201ENST00000563416 Q6ZNB5 142 aa10.12□□□□□ -0.79
LINC00254-201ENST00000563416 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
LINC00254-201ENST00000563416 MAP4K5Q9Y4K4 846 aa10.12□□□□□ -0.79
LINC00254-201ENST00000563416 J3QL48 77 aa10.11□□□□□ -0.79
LINC00254-201ENST00000563416 ADH1CP00326 375 aa10.11□□□□□ -0.79
LINC00254-201ENST00000563416 ABL2P42684 1182 aa10.11□□□□□ -0.79
LINC00254-201ENST00000563416 NR1H3Q13133 447 aa10.11□□□□□ -0.79
LINC00254-201ENST00000563416 VASH1Q7L8A9 365 aaPredicted RBP10.11□□□□□ -0.79
LINC00254-201ENST00000563416 FBXO45P0C2W1 286 aa10.1□□□□□ -0.79
LINC00254-201ENST00000563416 SMPD1P17405 629 aa10.1□□□□□ -0.79
LINC00254-201ENST00000563416 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
LINC00254-201ENST00000563416 OCSTAMPQ9BR26 566 aa10.1□□□□□ -0.79
LINC00254-201ENST00000563416 GPR37L1O60883 481 aa10.09□□□□□ -0.79
LINC00254-201ENST00000563416 MCCD1P59942 119 aaPredicted RBP10.09□□□□□ -0.79
LINC00254-201ENST00000563416 NR5A1Q13285 461 aa10.09□□□□□ -0.79
LINC00254-201ENST00000563416 NBPF20Q3BBV1 942 aa10.09□□□□□ -0.79
LINC00254-201ENST00000563416 COG6Q9Y2V7 657 aa10.09□□□□□ -0.79
LINC00254-201ENST00000563416 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
LINC00254-201ENST00000563416 PCDHB9Q9Y5E1 797 aa10.07□□□□□ -0.8
LINC00254-201ENST00000563416 GTF3C3Q9Y5Q9 886 aa10.07□□□□□ -0.8
LINC00254-201ENST00000563416 AVPP01185 164 aa10.06□□□□□ -0.8
LINC00254-201ENST00000563416 NNTQ13423 1086 aa10.06□□□□□ -0.8
LINC00254-201ENST00000563416 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
LINC00254-201ENST00000563416 FSHRP23945 695 aa10.05□□□□□ -0.8
LINC00254-201ENST00000563416 EIF4G2P78344 907 aaKnown RBP eCLIP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms