RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PDXDC2PQ6P474 469 aa6.24□□□□□ -1.41
CHD9-207ENST00000562806 BPHLQ86WA6 291 aaPredicted RBP6.24□□□□□ -1.41
CHD9-207ENST00000562806 MAP10Q9P2G4 905 aa6.24□□□□□ -1.41
CHD9-207ENST00000562806 NDUFB9Q9Y6M9 179 aa6.24□□□□□ -1.41
CHD9-207ENST00000562806 PTK2Q05397 1052 aa6.23□□□□□ -1.41
CHD9-207ENST00000562806 WWC1Q8IX03 1113 aa6.23□□□□□ -1.41
CHD9-207ENST00000562806 ZNF511Q8NB15 262 aa6.23□□□□□ -1.41
CHD9-207ENST00000562806 WNT7AO00755 349 aa6.22□□□□□ -1.41
CHD9-207ENST00000562806 VARSP26640 1264 aaKnown RBP6.22□□□□□ -1.41
CHD9-207ENST00000562806 PRR20EP86478 221 aa6.22□□□□□ -1.41
CHD9-207ENST00000562806 PRR20CP86479 221 aa6.22□□□□□ -1.41
CHD9-207ENST00000562806 PRR20DP86480 221 aa6.22□□□□□ -1.41
CHD9-207ENST00000562806 PRR20BP86481 221 aa6.22□□□□□ -1.41
CHD9-207ENST00000562806 PRR20AP86496 221 aa6.22□□□□□ -1.41
CHD9-207ENST00000562806 NR6A1Q15406 480 aa6.22□□□□□ -1.41
CHD9-207ENST00000562806 BAP1Q92560 729 aa6.22□□□□□ -1.41
CHD9-207ENST00000562806 ZNF330Q9Y3S2 320 aaPredicted RBP6.22□□□□□ -1.41
CHD9-207ENST00000562806 RAD21O60216 631 aa6.21□□□□□ -1.42
CHD9-207ENST00000562806 MCCD1P59942 119 aaPredicted RBP6.21□□□□□ -1.42
CHD9-207ENST00000562806 SH3BP2P78314 561 aa6.21□□□□□ -1.42
CHD9-207ENST00000562806 MCM6Q14566 821 aa6.21□□□□□ -1.42
CHD9-207ENST00000562806 AGERQ15109 404 aa6.21□□□□□ -1.42
CHD9-207ENST00000562806 ERICH6Q7L0X2 663 aa6.21□□□□□ -1.42
CHD9-207ENST00000562806 MTMR14Q8NCE2 650 aa6.21□□□□□ -1.42
CHD9-207ENST00000562806 TRIM52Q96A61 297 aa6.21□□□□□ -1.42
CHD9-207ENST00000562806 EMID1Q96A84 441 aaPredicted RBP6.21□□□□□ -1.42
CHD9-207ENST00000562806 RC3H1Q5TC82 1133 aaKnown RBP6.2□□□□□ -1.42
CHD9-207ENST00000562806 MPNDQ8N594 471 aa6.2□□□□□ -1.42
CHD9-207ENST00000562806 EHBP1Q8NDI1 1231 aa6.2□□□□□ -1.42
CHD9-207ENST00000562806 FAM174AQ8TBP5 190 aa6.2□□□□□ -1.42
CHD9-207ENST00000562806 GJD4Q96KN9 370 aaPredicted RBP6.2□□□□□ -1.42
CHD9-207ENST00000562806 TRIM34Q9BYJ4 488 aa6.2□□□□□ -1.42
CHD9-207ENST00000562806 HMX1Q9NP08 348 aaPredicted RBP6.2□□□□□ -1.42
CHD9-207ENST00000562806 SNRKQ9NRH2 765 aa6.2□□□□□ -1.42
CHD9-207ENST00000562806 CDV3Q9UKY7 258 aaKnown RBP6.2□□□□□ -1.42
CHD9-207ENST00000562806 ARHGAP9Q9BRR9 750 aa6.19□□□□□ -1.42
CHD9-207ENST00000562806 GTF3C3Q9Y5Q9 886 aa6.19□□□□□ -1.42
CHD9-207ENST00000562806 GDF9O60383 454 aa6.18□□□□□ -1.42
CHD9-207ENST00000562806 UBTFP17480 764 aaKnown RBP6.18□□□□□ -1.42
CHD9-207ENST00000562806 WASHC4Q2M389 1173 aa6.18□□□□□ -1.42
CHD9-207ENST00000562806 LINC01559Q495D7 138 aa6.18□□□□□ -1.42
CHD9-207ENST00000562806 SH3BP5LQ7L8J4 393 aa6.18□□□□□ -1.42
CHD9-207ENST00000562806 CYP4X1Q8N118 509 aa6.18□□□□□ -1.42
CHD9-207ENST00000562806 SNIP1Q8TAD8 396 aaKnown RBP6.18□□□□□ -1.42
CHD9-207ENST00000562806 IRX2Q9BZI1 471 aaPredicted RBP6.18□□□□□ -1.42
CHD9-207ENST00000562806 PDZRN3Q9UPQ7 1066 aa6.18□□□□□ -1.42
CHD9-207ENST00000562806 ZBBXA8MT70 800 aa6.17□□□□□ -1.42
CHD9-207ENST00000562806 NRG2O14511 850 aaPredicted RBP6.17□□□□□ -1.42
CHD9-207ENST00000562806 SKOR1P84550 965 aa6.17□□□□□ -1.42
CHD9-207ENST00000562806 SH3RF1Q7Z6J0 888 aa6.17□□□□□ -1.42
CHD9-207ENST00000562806 ZBTB33Q86T24 672 aa6.17□□□□□ -1.42
CHD9-207ENST00000562806 CCDC125Q86Z20 511 aa6.17□□□□□ -1.42
CHD9-207ENST00000562806 TRMT44Q8IYL2 757 aaKnown RBP6.17□□□□□ -1.42
CHD9-207ENST00000562806 TTC24A2A3L6 582 aaPredicted RBP6.16□□□□□ -1.42
CHD9-207ENST00000562806 FOXC1Q12948 553 aa6.16□□□□□ -1.42
CHD9-207ENST00000562806 EPS8L1Q8TE68 723 aa6.16□□□□□ -1.42
CHD9-207ENST00000562806 MRGPRX2Q96LB1 330 aa6.16□□□□□ -1.42
CHD9-207ENST00000562806 PKD2L1Q9P0L9 805 aa6.16□□□□□ -1.42
CHD9-207ENST00000562806 MAP4K5Q9Y4K4 846 aa6.16□□□□□ -1.42
CHD9-207ENST00000562806 GFRA3O60609 400 aa6.15□□□□□ -1.42
CHD9-207ENST00000562806 NR1H3Q13133 447 aa6.15□□□□□ -1.42
CHD9-207ENST00000562806 SLC10A4Q96EP9 437 aa6.15□□□□□ -1.42
CHD9-207ENST00000562806 C1QTNF2Q9BXJ5 285 aa6.15□□□□□ -1.42
CHD9-207ENST00000562806 MAGEB6P1A0A0J9YX57 407 aa6.14□□□□□ -1.43
CHD9-207ENST00000562806 SIAH2O43255 324 aa6.14□□□□□ -1.43
CHD9-207ENST00000562806 DGAT1O75907 488 aa6.14□□□□□ -1.43
CHD9-207ENST00000562806 SOX11P35716 441 aa6.14□□□□□ -1.43
CHD9-207ENST00000562806 EIF4G2P78344 907 aaKnown RBP eCLIP6.14□□□□□ -1.43
CHD9-207ENST00000562806 NBPF20Q3BBV1 942 aa6.14□□□□□ -1.43
CHD9-207ENST00000562806 FOXJ1Q92949 421 aa6.14□□□□□ -1.43
CHD9-207ENST00000562806 CDK15Q96Q40 435 aa6.14□□□□□ -1.43
CHD9-207ENST00000562806 TOR4AQ9NXH8 423 aa6.14□□□□□ -1.43
CHD9-207ENST00000562806 A6NJR5 290 aa6.13□□□□□ -1.43
CHD9-207ENST00000562806 NR5A1Q13285 461 aa6.13□□□□□ -1.43
CHD9-207ENST00000562806 DZIP3Q86Y13 1208 aaKnown RBP6.13□□□□□ -1.43
CHD9-207ENST00000562806 GDPD2Q9HCC8 539 aa6.13□□□□□ -1.43
CHD9-207ENST00000562806 TBC1D2BQ9UPU7 963 aa6.13□□□□□ -1.43
CHD9-207ENST00000562806 COG6Q9Y2V7 657 aa6.13□□□□□ -1.43
CHD9-207ENST00000562806 WASF2Q9Y6W5 498 aa6.13□□□□□ -1.43
CHD9-207ENST00000562806 TNFRSF10AO00220 468 aa6.12□□□□□ -1.43
CHD9-207ENST00000562806 ABL2P42684 1182 aa6.12□□□□□ -1.43
CHD9-207ENST00000562806 ERFEQ4G0M1 354 aa6.12□□□□□ -1.43
CHD9-207ENST00000562806 TRIM67Q6ZTA4 783 aa6.12□□□□□ -1.43
CHD9-207ENST00000562806 ADAM32Q8TC27 787 aa6.12□□□□□ -1.43
CHD9-207ENST00000562806 ADH1CP00326 375 aa6.11□□□□□ -1.43
CHD9-207ENST00000562806 DHX9Q08211 1270 aaKnown RBP6.11□□□□□ -1.43
CHD9-207ENST00000562806 PKDCCQ504Y2 493 aa6.11□□□□□ -1.43
CHD9-207ENST00000562806 RNF20Q5VTR2 975 aa6.11□□□□□ -1.43
CHD9-207ENST00000562806 VASH1Q7L8A9 365 aaPredicted RBP6.11□□□□□ -1.43
CHD9-207ENST00000562806 SEPT12Q8IYM1 358 aa6.11□□□□□ -1.43
CHD9-207ENST00000562806 CARD14Q9BXL6 1004 aa6.11□□□□□ -1.43
CHD9-207ENST00000562806 ALDH1A1P00352 501 aa6.1□□□□□ -1.43
CHD9-207ENST00000562806 FBXO45P0C2W1 286 aa6.1□□□□□ -1.43
CHD9-207ENST00000562806 CTC1Q2NKJ3 1217 aa6.1□□□□□ -1.43
CHD9-207ENST00000562806 C4orf48Q5BLP8 95 aa6.1□□□□□ -1.43
CHD9-207ENST00000562806 ARID5BQ14865 1188 aa6.09□□□□□ -1.43
CHD9-207ENST00000562806 FAM187AA6NFU0 413 aa6.08□□□□□ -1.44
CHD9-207ENST00000562806 GPR37L1O60883 481 aa6.08□□□□□ -1.44
CHD9-207ENST00000562806 AVPP01185 164 aa6.08□□□□□ -1.44
CHD9-207ENST00000562806 SEMA3FQ13275 785 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms