RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 MS4A1P11836 297 aa14.65□□□□□ -0.06
CLPX-204ENST00000559152 NUDT16Q96DE0 195 aaKnown RBP14.65□□□□□ -0.06
CLPX-204ENST00000559152 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
CLPX-204ENST00000559152 ADGRB2O60241 1585 aa14.64□□□□□ -0.07
CLPX-204ENST00000559152 U2SURPO15042 1029 aaKnown RBP14.64□□□□□ -0.07
CLPX-204ENST00000559152 C20orf194Q5TEA3 1177 aa14.64□□□□□ -0.07
CLPX-204ENST00000559152 RRP7AQ9Y3A4 280 aaKnown RBP14.64□□□□□ -0.07
CLPX-204ENST00000559152 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
CLPX-204ENST00000559152 CT47B1P0C2W7 299 aaPredicted RBP14.64□□□□□ -0.07
CLPX-204ENST00000559152 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
CLPX-204ENST00000559152 CENPQQ7L2Z9 268 aaPredicted RBP14.63□□□□□ -0.07
CLPX-204ENST00000559152 PLEKHF1Q96S99 279 aa14.63□□□□□ -0.07
CLPX-204ENST00000559152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.62□□□□□ -0.07
CLPX-204ENST00000559152 AAMPQ13685 434 aa14.62□□□□□ -0.07
CLPX-204ENST00000559152 CDC42BPGQ6DT37 1551 aa14.62□□□□□ -0.07
CLPX-204ENST00000559152 BCAR3O75815 825 aa14.61□□□□□ -0.07
CLPX-204ENST00000559152 FCHSD2O94868 740 aa14.61□□□□□ -0.07
CLPX-204ENST00000559152 NEFMP07197 916 aa14.61□□□□□ -0.07
CLPX-204ENST00000559152 AATKQ6ZMQ8 1374 aa14.61□□□□□ -0.07
CLPX-204ENST00000559152 CANXP27824 592 aaKnown RBP14.61□□□□□ -0.07
CLPX-204ENST00000559152 SLIT1O75093 1534 aa14.6□□□□□ -0.07
CLPX-204ENST00000559152 IL16Q14005 1332 aa14.6□□□□□ -0.07
CLPX-204ENST00000559152 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
CLPX-204ENST00000559152 THEMISQ8N1K5 641 aaPredicted RBP14.6□□□□□ -0.07
CLPX-204ENST00000559152 RIMS1Q86UR5 1692 aaKnown RBP14.6□□□□□ -0.07
CLPX-204ENST00000559152 LTKP29376 864 aa14.6□□□□□ -0.07
CLPX-204ENST00000559152 CEBPAP49715 358 aaPredicted RBP14.6□□□□□ -0.07
CLPX-204ENST00000559152 POLKQ9UBT6 870 aa14.6□□□□□ -0.07
CLPX-204ENST00000559152 ARHGAP23Q9P227 1491 aa14.59□□□□□ -0.07
CLPX-204ENST00000559152 ROBO2Q9HCK4 1378 aa14.59□□□□□ -0.07
CLPX-204ENST00000559152 COG3Q96JB2 828 aa14.59□□□□□ -0.07
CLPX-204ENST00000559152 KDM2BQ8NHM5 1336 aa14.58□□□□□ -0.07
CLPX-204ENST00000559152 RARSP54136 660 aaKnown RBP14.58□□□□□ -0.07
CLPX-204ENST00000559152 TBX22Q9Y458 520 aa14.58□□□□□ -0.07
CLPX-204ENST00000559152 C3P01024 1663 aa14.57□□□□□ -0.08
CLPX-204ENST00000559152 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
CLPX-204ENST00000559152 ANP32AP39687 249 aaKnown RBP14.56□□□□□ -0.08
CLPX-204ENST00000559152 CDK12Q9NYV4 1490 aaPredicted RBP14.56□□□□□ -0.08
CLPX-204ENST00000559152 MON2Q7Z3U7 1717 aa14.56□□□□□ -0.08
CLPX-204ENST00000559152 PLEKHG3A1L390 1219 aa14.56□□□□□ -0.08
CLPX-204ENST00000559152 RIPK4P57078 832 aa14.56□□□□□ -0.08
CLPX-204ENST00000559152 DIP2AQ14689 1571 aa14.55□□□□□ -0.08
CLPX-204ENST00000559152 PPM1GO15355 546 aaPredicted RBP14.55□□□□□ -0.08
CLPX-204ENST00000559152 NME9Q86XW9 330 aa14.55□□□□□ -0.08
CLPX-204ENST00000559152 TRIM35Q9UPQ4 493 aa14.55□□□□□ -0.08
CLPX-204ENST00000559152 CALD1Q05682 793 aaKnown RBP14.54□□□□□ -0.08
CLPX-204ENST00000559152 PTCH1Q13635 1447 aa14.54□□□□□ -0.08
CLPX-204ENST00000559152 ITSN1Q15811 1721 aa14.54□□□□□ -0.08
CLPX-204ENST00000559152 PRR36Q9H6K5 1346 aa14.54□□□□□ -0.08
CLPX-204ENST00000559152 AKAP12Q02952 1782 aa14.53□□□□□ -0.08
CLPX-204ENST00000559152 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
CLPX-204ENST00000559152 RSPH6AQ9H0K4 717 aa14.53□□□□□ -0.08
CLPX-204ENST00000559152 PDE4AP27815 886 aa14.53□□□□□ -0.08
CLPX-204ENST00000559152 FRAT1Q92837 279 aaPredicted RBP14.53□□□□□ -0.08
CLPX-204ENST00000559152 SLC26A8Q96RN1 970 aa14.53□□□□□ -0.08
CLPX-204ENST00000559152 AMOTL2Q9Y2J4 779 aa14.53□□□□□ -0.08
CLPX-204ENST00000559152 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.08
CLPX-204ENST00000559152 CLUAP1Q96AJ1 413 aa14.52□□□□□ -0.08
CLPX-204ENST00000559152 BACH2Q9BYV9 841 aa14.52□□□□□ -0.08
CLPX-204ENST00000559152 PRKAR2BP31323 418 aa14.51□□□□□ -0.09
CLPX-204ENST00000559152 IL13P35225 146 aa14.51□□□□□ -0.09
CLPX-204ENST00000559152 PTPRUQ92729 1446 aa14.51□□□□□ -0.09
CLPX-204ENST00000559152 MSH5O43196 834 aa14.51□□□□□ -0.09
CLPX-204ENST00000559152 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.51□□□□□ -0.09
CLPX-204ENST00000559152 PIK3R4Q99570 1358 aa14.51□□□□□ -0.09
CLPX-204ENST00000559152 EMILIN1Q9Y6C2 1016 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 LRRC7Q96NW7 1537 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 ACEP12821 1306 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 TTC21BQ7Z4L5 1316 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 LMOD3Q0VAK6 560 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 NFE2L2Q16236 605 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 ZKSCAN2Q63HK3 967 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 ZNF428Q96B54 188 aa14.5□□□□□ -0.09
CLPX-204ENST00000559152 TOPAZ1Q8N9V7 1692 aa14.49□□□□□ -0.09
CLPX-204ENST00000559152 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
CLPX-204ENST00000559152 PANK1Q8TE04 598 aa14.49□□□□□ -0.09
CLPX-204ENST00000559152 COG6Q9Y2V7 657 aa14.49□□□□□ -0.09
CLPX-204ENST00000559152 MAP2P11137 1827 aaKnown RBP14.49□□□□□ -0.09
CLPX-204ENST00000559152 EXOSC9Q06265 439 aaKnown RBP14.49□□□□□ -0.09
CLPX-204ENST00000559152 USP6P35125 1406 aa14.48□□□□□ -0.09
CLPX-204ENST00000559152 TTC21AQ8NDW8 1320 aa14.48□□□□□ -0.09
CLPX-204ENST00000559152 TSR2Q969E8 191 aaKnown RBP14.47□□□□□ -0.09
CLPX-204ENST00000559152 IPO9Q96P70 1041 aaKnown RBP14.47□□□□□ -0.09
CLPX-204ENST00000559152 FBLN1P23142 703 aa14.47□□□□□ -0.09
CLPX-204ENST00000559152 SMC4Q9NTJ3 1288 aa14.47□□□□□ -0.09
CLPX-204ENST00000559152 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
CLPX-204ENST00000559152 NRKQ7Z2Y5 1582 aa14.46□□□□□ -0.09
CLPX-204ENST00000559152 ALDH1L2Q3SY69 923 aa14.46□□□□□ -0.09
CLPX-204ENST00000559152 FTSJ3Q8IY81 847 aaKnown RBP14.46□□□□□ -0.09
CLPX-204ENST00000559152 OVOS2A0A0J9YW53 1432 aa14.46□□□□□ -0.09
CLPX-204ENST00000559152 OVOS2Q6IE36 1432 aa14.46□□□□□ -0.09
CLPX-204ENST00000559152 IPO8O15397 1037 aaKnown RBP14.46□□□□□ -0.1
CLPX-204ENST00000559152 HMOX1P09601 288 aa14.46□□□□□ -0.1
CLPX-204ENST00000559152 DZIP1LQ8IYY4 767 aaKnown RBP14.45□□□□□ -0.1
CLPX-204ENST00000559152 USP31Q70CQ4 1352 aa14.45□□□□□ -0.1
CLPX-204ENST00000559152 KIF16BQ96L93 1317 aa14.45□□□□□ -0.1
CLPX-204ENST00000559152 GNAI1P63096 354 aa14.45□□□□□ -0.1
CLPX-204ENST00000559152 MVPQ14764 893 aaKnown RBP14.45□□□□□ -0.1
CLPX-204ENST00000559152 RRS1Q15050 365 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms