RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 NUTM2DQ5VT03 806 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-210ENST00000555658 NUTM2AQ8IVF1 878 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-210ENST00000555658 ZNF511Q8NB15 262 aa7.91□□□□□ -1.14
FOXN3-210ENST00000555658 TSC1Q92574 1164 aa7.91□□□□□ -1.14
FOXN3-210ENST00000555658 SNRPBP14678 240 aaKnown RBP7.9□□□□□ -1.14
FOXN3-210ENST00000555658 PRPF38BQ5VTL8 546 aaKnown RBP7.9□□□□□ -1.14
FOXN3-210ENST00000555658 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
FOXN3-210ENST00000555658 FAM174AQ8TBP5 190 aa7.9□□□□□ -1.14
FOXN3-210ENST00000555658 HRCP23327 699 aa7.89□□□□□ -1.15
FOXN3-210ENST00000555658 AGERQ15109 404 aa7.89□□□□□ -1.15
FOXN3-210ENST00000555658 PCDHB15Q9Y5E8 787 aa7.89□□□□□ -1.15
FOXN3-210ENST00000555658 PDE4DQ08499 809 aa7.88□□□□□ -1.15
FOXN3-210ENST00000555658 CFAP99D6REC4 459 aa7.87□□□□□ -1.15
FOXN3-210ENST00000555658 SLC16A10Q8TF71 515 aa7.87□□□□□ -1.15
FOXN3-210ENST00000555658 TLL2Q9Y6L7 1015 aa7.87□□□□□ -1.15
FOXN3-210ENST00000555658 TERTO14746 1132 aaKnown RBP7.86□□□□□ -1.15
FOXN3-210ENST00000555658 ARID5BQ14865 1188 aa7.86□□□□□ -1.15
FOXN3-210ENST00000555658 ARMC2Q8NEN0 867 aa7.86□□□□□ -1.15
FOXN3-210ENST00000555658 HELBQ8NG08 1087 aaPredicted RBP7.86□□□□□ -1.15
FOXN3-210ENST00000555658 CABLES1Q8TDN4 633 aa7.86□□□□□ -1.15
FOXN3-210ENST00000555658 BMP1P13497 986 aa7.85□□□□□ -1.15
FOXN3-210ENST00000555658 INSM1Q01101 510 aaPredicted RBP7.85□□□□□ -1.15
FOXN3-210ENST00000555658 NFX1Q12986 1120 aaKnown RBP7.85□□□□□ -1.15
FOXN3-210ENST00000555658 NNTQ13423 1086 aa7.85□□□□□ -1.15
FOXN3-210ENST00000555658 SCARF1Q14162 830 aa7.85□□□□□ -1.15
FOXN3-210ENST00000555658 MPNDQ8N594 471 aa7.85□□□□□ -1.15
FOXN3-210ENST00000555658 RSPH6AQ9H0K4 717 aa7.85□□□□□ -1.15
FOXN3-210ENST00000555658 BPHLQ86WA6 291 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-210ENST00000555658 MAP10Q9P2G4 905 aa7.84□□□□□ -1.15
FOXN3-210ENST00000555658 ADH1CP00326 375 aa7.83□□□□□ -1.16
FOXN3-210ENST00000555658 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
FOXN3-210ENST00000555658 MYSM1Q5VVJ2 828 aa7.83□□□□□ -1.16
FOXN3-210ENST00000555658 SLC24A3Q9HC58 644 aa7.83□□□□□ -1.16
FOXN3-210ENST00000555658 ATP1B4Q9UN42 357 aaPredicted RBP7.83□□□□□ -1.16
FOXN3-210ENST00000555658 WDR4P57081 412 aaKnown RBP7.82□□□□□ -1.16
FOXN3-210ENST00000555658 TUSC1Q2TAM9 212 aa7.82□□□□□ -1.16
FOXN3-210ENST00000555658 FOXJ1Q92949 421 aa7.82□□□□□ -1.16
FOXN3-210ENST00000555658 F12P00748 615 aaPredicted RBP7.81□□□□□ -1.16
FOXN3-210ENST00000555658 NBPF14Q5TI25 921 aa7.81□□□□□ -1.16
FOXN3-210ENST00000555658 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
FOXN3-210ENST00000555658 NXF1Q9UBU9 619 aaKnown RBP7.81□□□□□ -1.16
FOXN3-210ENST00000555658 LIMD1Q9UGP4 676 aa7.81□□□□□ -1.16
FOXN3-210ENST00000555658 WIPF1O43516 503 aa7.8□□□□□ -1.16
FOXN3-210ENST00000555658 UPP2O95045 317 aa7.8□□□□□ -1.16
FOXN3-210ENST00000555658 CLK2P49760 499 aaKnown RBP7.8□□□□□ -1.16
FOXN3-210ENST00000555658 ZFP42Q96MM3 310 aa7.8□□□□□ -1.16
FOXN3-210ENST00000555658 STK17AQ9UEE5 414 aa7.8□□□□□ -1.16
FOXN3-210ENST00000555658 PER1O15534 1290 aaPredicted RBP7.79□□□□□ -1.16
FOXN3-210ENST00000555658 LILRB3O75022 631 aa7.79□□□□□ -1.16
FOXN3-210ENST00000555658 NR5A1Q13285 461 aa7.79□□□□□ -1.16
FOXN3-210ENST00000555658 QPCTQ16769 361 aa7.79□□□□□ -1.16
FOXN3-210ENST00000555658 MRPL14Q6P1L8 145 aaKnown RBP7.79□□□□□ -1.16
FOXN3-210ENST00000555658 IRF7Q92985 503 aa7.79□□□□□ -1.16
FOXN3-210ENST00000555658 CDK15Q96Q40 435 aa7.79□□□□□ -1.16
FOXN3-210ENST00000555658 TIMP2P16035 220 aa7.78□□□□□ -1.16
FOXN3-210ENST00000555658 NPAS3Q8IXF0 933 aa7.78□□□□□ -1.16
FOXN3-210ENST00000555658 ZIC2O95409 532 aaPredicted RBP7.77□□□□□ -1.17
FOXN3-210ENST00000555658 PURBQ96QR8 312 aaKnown RBP7.77□□□□□ -1.17
FOXN3-210ENST00000555658 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.17
FOXN3-210ENST00000555658 FAM181BA6NEQ2 426 aa7.76□□□□□ -1.17
FOXN3-210ENST00000555658 MAGEB6P1A0A0J9YX57 407 aa7.75□□□□□ -1.17
FOXN3-210ENST00000555658 RTL5Q5HYW3 569 aaPredicted RBP7.75□□□□□ -1.17
FOXN3-210ENST00000555658 GPKOWQ92917 476 aaPredicted RBP eCLIP7.75□□□□□ -1.17
FOXN3-210ENST00000555658 MAN1A2O60476 641 aa7.74□□□□□ -1.17
FOXN3-210ENST00000555658 VASH1Q7L8A9 365 aaPredicted RBP7.74□□□□□ -1.17
FOXN3-210ENST00000555658 BMP2P12643 396 aa7.73□□□□□ -1.17
FOXN3-210ENST00000555658 FSHRP23945 695 aa7.73□□□□□ -1.17
FOXN3-210ENST00000555658 VEGFBP49765 207 aa7.73□□□□□ -1.17
FOXN3-210ENST00000555658 C6orf118Q5T5N4 469 aa7.73□□□□□ -1.17
FOXN3-210ENST00000555658 ITPKCQ96DU7 683 aa7.73□□□□□ -1.17
FOXN3-210ENST00000555658 CARD14Q9BXL6 1004 aa7.73□□□□□ -1.17
FOXN3-210ENST00000555658 ZFAND3Q9H8U3 227 aa7.73□□□□□ -1.17
FOXN3-210ENST00000555658 H3BM21 787 aa7.72□□□□□ -1.17
FOXN3-210ENST00000555658 C4orf48Q5BLP8 95 aa7.72□□□□□ -1.17
FOXN3-210ENST00000555658 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
FOXN3-210ENST00000555658 MAP4K5Q9Y4K4 846 aa7.72□□□□□ -1.17
FOXN3-210ENST00000555658 NR3C2P08235 984 aa7.71□□□□□ -1.18
FOXN3-210ENST00000555658 GRM5P41594 1212 aa7.71□□□□□ -1.18
FOXN3-210ENST00000555658 PNMA1Q8ND90 353 aa7.71□□□□□ -1.18
FOXN3-210ENST00000555658 KLF16Q9BXK1 252 aaPredicted RBP7.71□□□□□ -1.18
FOXN3-210ENST00000555658 EMILIN1Q9Y6C2 1016 aa7.71□□□□□ -1.18
FOXN3-210ENST00000555658 GMPRP36959 345 aa7.7□□□□□ -1.18
FOXN3-210ENST00000555658 CTDSPL2Q05D32 466 aa7.7□□□□□ -1.18
FOXN3-210ENST00000555658 SKIV2LQ15477 1246 aaKnown RBP7.7□□□□□ -1.18
FOXN3-210ENST00000555658 SH3BP5LQ7L8J4 393 aa7.7□□□□□ -1.18
FOXN3-210ENST00000555658 TRMT44Q8IYL2 757 aaKnown RBP7.7□□□□□ -1.18
FOXN3-210ENST00000555658 SLC10A4Q96EP9 437 aa7.7□□□□□ -1.18
FOXN3-210ENST00000555658 ARHGAP9Q9BRR9 750 aa7.7□□□□□ -1.18
FOXN3-210ENST00000555658 C1QTNF2Q9BXJ5 285 aa7.7□□□□□ -1.18
FOXN3-210ENST00000555658 SH3RF1Q7Z6J0 888 aa7.69□□□□□ -1.18
FOXN3-210ENST00000555658 CCDC116Q8IYX3 515 aa7.69□□□□□ -1.18
FOXN3-210ENST00000555658 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
FOXN3-210ENST00000555658 TSEN34Q9BSV6 310 aaKnown RBP7.69□□□□□ -1.18
FOXN3-210ENST00000555658 PGPEP1Q9NXJ5 209 aa7.69□□□□□ -1.18
FOXN3-210ENST00000555658 CDV3Q9UKY7 258 aaKnown RBP7.69□□□□□ -1.18
FOXN3-210ENST00000555658 SH3D19Q5HYK7 790 aa7.68□□□□□ -1.18
FOXN3-210ENST00000555658 PDXDC2PQ6P474 469 aa7.68□□□□□ -1.18
FOXN3-210ENST00000555658 ZBTB33Q86T24 672 aa7.68□□□□□ -1.18
FOXN3-210ENST00000555658 MEIOBQ8N635 442 aa7.68□□□□□ -1.18
FOXN3-210ENST00000555658 BCANQ96GW7 911 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms