RNA–Protein interactions for RNA: ENST00000555490.1

AL352955.1-201, humanhuman

TSL 3 BASIC

Gene AL352955.1, Length 332 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL352955.1-201ENST00000555490 PTCRAQ6ISU1 281 aaPredicted RBP7.14□□□□□ -1.27
AL352955.1-201ENST00000555490 CNTNAP3BQ96NU0 1288 aa7.14□□□□□ -1.27
AL352955.1-201ENST00000555490 CNTNAP3Q9BZ76 1288 aa7.14□□□□□ -1.27
AL352955.1-201ENST00000555490 MAN1A2O60476 641 aa7.13□□□□□ -1.27
AL352955.1-201ENST00000555490 SH3BP2P78314 561 aa7.12□□□□□ -1.27
AL352955.1-201ENST00000555490 FOXK2Q01167 660 aa7.12□□□□□ -1.27
AL352955.1-201ENST00000555490 NEUROD2Q15784 382 aa7.12□□□□□ -1.27
AL352955.1-201ENST00000555490 GIGYF2Q6Y7W6 1299 aaKnown RBP7.12□□□□□ -1.27
AL352955.1-201ENST00000555490 TIMP2P16035 220 aa7.11□□□□□ -1.27
AL352955.1-201ENST00000555490 WDR4P57081 412 aaKnown RBP7.11□□□□□ -1.27
AL352955.1-201ENST00000555490 NNTQ13423 1086 aa7.11□□□□□ -1.27
AL352955.1-201ENST00000555490 NUTM1Q86Y26 1132 aa7.11□□□□□ -1.27
AL352955.1-201ENST00000555490 GPR161Q8N6U8 529 aaKnown RBP7.11□□□□□ -1.27
AL352955.1-201ENST00000555490 PHOX2BQ99453 314 aa7.11□□□□□ -1.27
AL352955.1-201ENST00000555490 FAM217BQ9NTX9 383 aaPredicted RBP7.11□□□□□ -1.27
AL352955.1-201ENST00000555490 TLL2Q9Y6L7 1015 aa7.11□□□□□ -1.27
AL352955.1-201ENST00000555490 JUNDP17535 347 aa7.1□□□□□ -1.27
AL352955.1-201ENST00000555490 SSTR3P32745 418 aaPredicted RBP7.1□□□□□ -1.27
AL352955.1-201ENST00000555490 USP46P62068 366 aa7.1□□□□□ -1.27
AL352955.1-201ENST00000555490 ZNF385CQ66K41 422 aaPredicted RBP7.1□□□□□ -1.27
AL352955.1-201ENST00000555490 PARP9Q8IXQ6 854 aa7.1□□□□□ -1.27
AL352955.1-201ENST00000555490 DDRGK1Q96HY6 314 aa7.1□□□□□ -1.27
AL352955.1-201ENST00000555490 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
AL352955.1-201ENST00000555490 SVOPQ8N4V2 548 aa7.09□□□□□ -1.27
AL352955.1-201ENST00000555490 HLA-CQ95604 372 aa7.09□□□□□ -1.27
AL352955.1-201ENST00000555490 NUDT12Q9BQG2 462 aa7.09□□□□□ -1.27
AL352955.1-201ENST00000555490 PLEKHG3A1L390 1219 aa7.08□□□□□ -1.28
AL352955.1-201ENST00000555490 ADAM23O75077 832 aa7.08□□□□□ -1.28
AL352955.1-201ENST00000555490 ADH1CP00326 375 aa7.08□□□□□ -1.28
AL352955.1-201ENST00000555490 CD46P15529 392 aa7.08□□□□□ -1.28
AL352955.1-201ENST00000555490 C6orf118Q5T5N4 469 aa7.08□□□□□ -1.28
AL352955.1-201ENST00000555490 KANK3Q6NY19 840 aa7.08□□□□□ -1.28
AL352955.1-201ENST00000555490 RSPH6AQ9H0K4 717 aa7.08□□□□□ -1.28
AL352955.1-201ENST00000555490 KDM4AO75164 1064 aa7.07□□□□□ -1.28
AL352955.1-201ENST00000555490 PRKCSHP14314 528 aaPredicted RBP7.07□□□□□ -1.28
AL352955.1-201ENST00000555490 MARSP56192 900 aaKnown RBP7.07□□□□□ -1.28
AL352955.1-201ENST00000555490 PSMG3-AS1Q96PY0 264 aa7.06□□□□□ -1.28
AL352955.1-201ENST00000555490 BEGAINQ9BUH8 593 aa7.06□□□□□ -1.28
AL352955.1-201ENST00000555490 KLF16Q9BXK1 252 aaPredicted RBP7.06□□□□□ -1.28
AL352955.1-201ENST00000555490 COL25A1Q9BXS0 654 aaPredicted RBP7.06□□□□□ -1.28
AL352955.1-201ENST00000555490 KRTAP9-2Q9BYQ4 174 aa7.06□□□□□ -1.28
AL352955.1-201ENST00000555490 KDM4CQ9H3R0 1056 aa7.06□□□□□ -1.28
AL352955.1-201ENST00000555490 WHAMMQ8TF30 809 aa7.05□□□□□ -1.28
AL352955.1-201ENST00000555490 SYMPKQ92797 1274 aaKnown RBP7.05□□□□□ -1.28
AL352955.1-201ENST00000555490 ARHGEF15O94989 841 aa7.04□□□□□ -1.28
AL352955.1-201ENST00000555490 LINC01559Q495D7 138 aa7.04□□□□□ -1.28
AL352955.1-201ENST00000555490 ATP1B4Q9UN42 357 aaPredicted RBP7.04□□□□□ -1.28
AL352955.1-201ENST00000555490 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
AL352955.1-201ENST00000555490 MSTNO14793 375 aa7.03□□□□□ -1.28
AL352955.1-201ENST00000555490 VARSP26640 1264 aaKnown RBP7.03□□□□□ -1.28
AL352955.1-201ENST00000555490 MPNDQ8N594 471 aa7.03□□□□□ -1.28
AL352955.1-201ENST00000555490 BAP1Q92560 729 aa7.03□□□□□ -1.28
AL352955.1-201ENST00000555490 SCARF2Q96GP6 870 aaPredicted RBP7.03□□□□□ -1.28
AL352955.1-201ENST00000555490 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
AL352955.1-201ENST00000555490 BMP2P12643 396 aa7.02□□□□□ -1.29
AL352955.1-201ENST00000555490 GUCA2AQ02747 115 aa7.02□□□□□ -1.29
AL352955.1-201ENST00000555490 RNFT1Q5M7Z0 435 aa7.02□□□□□ -1.29
AL352955.1-201ENST00000555490 DNMT3LQ9UJW3 386 aa7.02□□□□□ -1.29
AL352955.1-201ENST00000555490 ZIC2O95409 532 aaPredicted RBP7.01□□□□□ -1.29
AL352955.1-201ENST00000555490 BRPF1P55201 1214 aaPredicted RBP7.01□□□□□ -1.29
AL352955.1-201ENST00000555490 UNC93B1Q9H1C4 597 aa7.01□□□□□ -1.29
AL352955.1-201ENST00000555490 GPBP1L1Q9HC44 474 aaPredicted RBP7.01□□□□□ -1.29
AL352955.1-201ENST00000555490 HOXA2O43364 376 aa7□□□□□ -1.29
AL352955.1-201ENST00000555490 CCNYL3P0C7X3 344 aa7□□□□□ -1.29
AL352955.1-201ENST00000555490 SLURP2P0DP57 97 aa7□□□□□ -1.29
AL352955.1-201ENST00000555490 MS4A1P11836 297 aa7□□□□□ -1.29
AL352955.1-201ENST00000555490 GJA5P36382 358 aa7□□□□□ -1.29
AL352955.1-201ENST00000555490 SOS2Q07890 1332 aaPredicted RBP7□□□□□ -1.29
AL352955.1-201ENST00000555490 UPP2O95045 317 aa6.99□□□□□ -1.29
AL352955.1-201ENST00000555490 PLA2G4EQ3MJ16 856 aa6.99□□□□□ -1.29
AL352955.1-201ENST00000555490 RETREG3Q86VR2 466 aa6.99□□□□□ -1.29
AL352955.1-201ENST00000555490 ZNF511Q8NB15 262 aa6.99□□□□□ -1.29
AL352955.1-201ENST00000555490 ITPKCQ96DU7 683 aa6.99□□□□□ -1.29
AL352955.1-201ENST00000555490 SPOCK3Q9BQ16 436 aa6.99□□□□□ -1.29
AL352955.1-201ENST00000555490 TBC1D2Q9BYX2 928 aa6.99□□□□□ -1.29
AL352955.1-201ENST00000555490 SPIRE2Q8WWL2 714 aa6.98□□□□□ -1.29
AL352955.1-201ENST00000555490 SPDYE5A6NIY4 337 aa6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 FDX1P10109 184 aa6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 PTSQ03393 145 aa6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 KRTAP1-3Q8IUG1 177 aa6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 LINC00528Q8N1L1 170 aa6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 Q8N3U1 123 aa6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 NANOS1Q8WY41 292 aaKnown RBP6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 PCMTD1Q96MG8 357 aaPredicted RBP6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 EVA1BQ9NVM1 165 aa6.97□□□□□ -1.29
AL352955.1-201ENST00000555490 CLK2P49760 499 aaKnown RBP6.96□□□□□ -1.3
AL352955.1-201ENST00000555490 ARID5BQ14865 1188 aa6.96□□□□□ -1.3
AL352955.1-201ENST00000555490 GOPCQ9HD26 462 aa6.96□□□□□ -1.3
AL352955.1-201ENST00000555490 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.95□□□□□ -1.3
AL352955.1-201ENST00000555490 SH3D19Q5HYK7 790 aa6.95□□□□□ -1.3
AL352955.1-201ENST00000555490 RIC3Q7Z5B4 369 aa6.95□□□□□ -1.3
AL352955.1-201ENST00000555490 FAM174AQ8TBP5 190 aa6.95□□□□□ -1.3
AL352955.1-201ENST00000555490 FAM117AQ9C073 453 aa6.95□□□□□ -1.3
AL352955.1-201ENST00000555490 C6orf229H3BNL8 230 aa6.94□□□□□ -1.3
AL352955.1-201ENST00000555490 ITGB2P05107 769 aa6.94□□□□□ -1.3
AL352955.1-201ENST00000555490 NR3C2P08235 984 aa6.94□□□□□ -1.3
AL352955.1-201ENST00000555490 KCNH2Q12809 1159 aa6.94□□□□□ -1.3
AL352955.1-201ENST00000555490 SKIV2LQ15477 1246 aaKnown RBP6.94□□□□□ -1.3
AL352955.1-201ENST00000555490 TUSC1Q2TAM9 212 aa6.94□□□□□ -1.3
AL352955.1-201ENST00000555490 MYSM1Q5VVJ2 828 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms