RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-205ENST00000555227 PRPF38BQ5VTL8 546 aaKnown RBP11.22□□□□□ -0.61
LINC01578-205ENST00000555227 CTHP32929 405 aa11.21□□□□□ -0.61
LINC01578-205ENST00000555227 CSPP1Q1MSJ5 1256 aa11.21□□□□□ -0.61
LINC01578-205ENST00000555227 IRF7Q92985 503 aa11.21□□□□□ -0.61
LINC01578-205ENST00000555227 HRCP23327 699 aa11.2□□□□□ -0.62
LINC01578-205ENST00000555227 ZSCAN1Q8NBB4 408 aa11.2□□□□□ -0.62
LINC01578-205ENST00000555227 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
LINC01578-205ENST00000555227 WASF2Q9Y6W5 498 aa11.2□□□□□ -0.62
LINC01578-205ENST00000555227 NUTM2BA6NNL0 878 aaPredicted RBP11.19□□□□□ -0.62
LINC01578-205ENST00000555227 NUTM2EB1AL46 878 aaPredicted RBP11.19□□□□□ -0.62
LINC01578-205ENST00000555227 GMPRP36959 345 aa11.19□□□□□ -0.62
LINC01578-205ENST00000555227 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
LINC01578-205ENST00000555227 NUTM2DQ5VT03 806 aaPredicted RBP11.19□□□□□ -0.62
LINC01578-205ENST00000555227 NUTM2AQ8IVF1 878 aaPredicted RBP11.19□□□□□ -0.62
LINC01578-205ENST00000555227 SH3BP2P78314 561 aa11.18□□□□□ -0.62
LINC01578-205ENST00000555227 TSC1Q92574 1164 aa11.18□□□□□ -0.62
LINC01578-205ENST00000555227 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
LINC01578-205ENST00000555227 BAP1Q92560 729 aa11.17□□□□□ -0.62
LINC01578-205ENST00000555227 BCANQ96GW7 911 aa11.17□□□□□ -0.62
LINC01578-205ENST00000555227 LOC100996750A0A140TA64 210 aa11.16□□□□□ -0.62
LINC01578-205ENST00000555227 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
LINC01578-205ENST00000555227 LORP23490 312 aaPredicted RBP11.16□□□□□ -0.62
LINC01578-205ENST00000555227 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
LINC01578-205ENST00000555227 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
LINC01578-205ENST00000555227 KRTAP4-6Q9BYQ5 205 aa11.16□□□□□ -0.62
LINC01578-205ENST00000555227 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
LINC01578-205ENST00000555227 CABLES1Q8TDN4 633 aa11.15□□□□□ -0.62
LINC01578-205ENST00000555227 PLEKHG3A1L390 1219 aa11.14□□□□□ -0.63
LINC01578-205ENST00000555227 H3BM21 787 aa11.14□□□□□ -0.63
LINC01578-205ENST00000555227 VARSP26640 1264 aaKnown RBP11.14□□□□□ -0.63
LINC01578-205ENST00000555227 SIAH2O43255 324 aa11.13□□□□□ -0.63
LINC01578-205ENST00000555227 TUSC1Q2TAM9 212 aa11.13□□□□□ -0.63
LINC01578-205ENST00000555227 HELBQ8NG08 1087 aaPredicted RBP11.13□□□□□ -0.63
LINC01578-205ENST00000555227 CLK2P49760 499 aaKnown RBP11.12□□□□□ -0.63
LINC01578-205ENST00000555227 TRIM46Q7Z4K8 759 aa11.12□□□□□ -0.63
LINC01578-205ENST00000555227 LIMD1Q9UGP4 676 aa11.12□□□□□ -0.63
LINC01578-205ENST00000555227 CAPN5O15484 640 aaPredicted RBP11.11□□□□□ -0.63
LINC01578-205ENST00000555227 BMP1P13497 986 aa11.11□□□□□ -0.63
LINC01578-205ENST00000555227 FAM174AQ8TBP5 190 aa11.1□□□□□ -0.63
LINC01578-205ENST00000555227 MAP10Q9P2G4 905 aa11.1□□□□□ -0.63
LINC01578-205ENST00000555227 AGERQ15109 404 aa11.09□□□□□ -0.63
LINC01578-205ENST00000555227 QPCTQ16769 361 aa11.09□□□□□ -0.63
LINC01578-205ENST00000555227 ARMC2Q8NEN0 867 aa11.09□□□□□ -0.63
LINC01578-205ENST00000555227 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
LINC01578-205ENST00000555227 TLL2Q9Y6L7 1015 aa11.09□□□□□ -0.63
LINC01578-205ENST00000555227 LILRB3O75022 631 aa11.08□□□□□ -0.64
LINC01578-205ENST00000555227 F12P00748 615 aaPredicted RBP11.08□□□□□ -0.64
LINC01578-205ENST00000555227 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
LINC01578-205ENST00000555227 MPNDQ8N594 471 aa11.06□□□□□ -0.64
LINC01578-205ENST00000555227 POLR3EQ9NVU0 708 aa11.06□□□□□ -0.64
LINC01578-205ENST00000555227 ERBB4Q15303 1308 aa11.06□□□□□ -0.64
LINC01578-205ENST00000555227 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
LINC01578-205ENST00000555227 VEGFBP49765 207 aa11.04□□□□□ -0.64
LINC01578-205ENST00000555227 NBPF14Q5TI25 921 aa11.04□□□□□ -0.64
LINC01578-205ENST00000555227 BPHLQ86WA6 291 aaPredicted RBP11.04□□□□□ -0.64
LINC01578-205ENST00000555227 DDRGK1Q96HY6 314 aa11.04□□□□□ -0.64
LINC01578-205ENST00000555227 NNTQ13423 1086 aa11.03□□□□□ -0.64
LINC01578-205ENST00000555227 ARID5BQ14865 1188 aa11.03□□□□□ -0.64
LINC01578-205ENST00000555227 FOXJ1Q92949 421 aa11.02□□□□□ -0.65
LINC01578-205ENST00000555227 ADH1CP00326 375 aa11.01□□□□□ -0.65
LINC01578-205ENST00000555227 RTL5Q5HYW3 569 aaPredicted RBP11.01□□□□□ -0.65
LINC01578-205ENST00000555227 KDM4CQ9H3R0 1056 aa11.01□□□□□ -0.65
LINC01578-205ENST00000555227 VSIG8P0DPA2 414 aa11□□□□□ -0.65
LINC01578-205ENST00000555227 ZFP42Q96MM3 310 aa11□□□□□ -0.65
LINC01578-205ENST00000555227 SKIV2LQ15477 1246 aaKnown RBP10.99□□□□□ -0.65
LINC01578-205ENST00000555227 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
LINC01578-205ENST00000555227 WDR4P57081 412 aaKnown RBP10.97□□□□□ -0.65
LINC01578-205ENST00000555227 SCARF1Q14162 830 aa10.97□□□□□ -0.65
LINC01578-205ENST00000555227 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
LINC01578-205ENST00000555227 GPKOWQ92917 476 aaPredicted RBP eCLIP10.97□□□□□ -0.65
LINC01578-205ENST00000555227 CDK15Q96Q40 435 aa10.97□□□□□ -0.65
LINC01578-205ENST00000555227 NR5A1Q13285 461 aa10.96□□□□□ -0.65
LINC01578-205ENST00000555227 MRPL14Q6P1L8 145 aaKnown RBP10.95□□□□□ -0.66
LINC01578-205ENST00000555227 MAGEB6P1A0A0J9YX57 407 aa10.94□□□□□ -0.66
LINC01578-205ENST00000555227 SUZ12Q15022 739 aaKnown RBP10.94□□□□□ -0.66
LINC01578-205ENST00000555227 TIMP2P16035 220 aa10.93□□□□□ -0.66
LINC01578-205ENST00000555227 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
LINC01578-205ENST00000555227 FAM117AQ9C073 453 aa10.93□□□□□ -0.66
LINC01578-205ENST00000555227 KCNMA1Q12791 1236 aa10.92□□□□□ -0.66
LINC01578-205ENST00000555227 C4orf48Q5BLP8 95 aa10.92□□□□□ -0.66
LINC01578-205ENST00000555227 VASH1Q7L8A9 365 aaPredicted RBP10.92□□□□□ -0.66
LINC01578-205ENST00000555227 ZIC2O95409 532 aaPredicted RBP10.91□□□□□ -0.66
LINC01578-205ENST00000555227 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
LINC01578-205ENST00000555227 CARD14Q9BXL6 1004 aa10.91□□□□□ -0.66
LINC01578-205ENST00000555227 UPP2O95045 317 aa10.9□□□□□ -0.66
LINC01578-205ENST00000555227 SH3BP5LQ7L8J4 393 aa10.9□□□□□ -0.66
LINC01578-205ENST00000555227 SH3RF1Q7Z6J0 888 aa10.9□□□□□ -0.66
LINC01578-205ENST00000555227 MAP4K5Q9Y4K4 846 aa10.9□□□□□ -0.66
LINC01578-205ENST00000555227 FSHRP23945 695 aa10.89□□□□□ -0.67
LINC01578-205ENST00000555227 PURBQ96QR8 312 aaKnown RBP10.89□□□□□ -0.67
LINC01578-205ENST00000555227 C1QTNF2Q9BXJ5 285 aa10.89□□□□□ -0.67
LINC01578-205ENST00000555227 AP1G2O75843 785 aa10.88□□□□□ -0.67
LINC01578-205ENST00000555227 TRMT44Q8IYL2 757 aaKnown RBP10.88□□□□□ -0.67
LINC01578-205ENST00000555227 PROCA1Q8NCQ7 364 aaPredicted RBP10.88□□□□□ -0.67
LINC01578-205ENST00000555227 ARHGAP9Q9BRR9 750 aa10.88□□□□□ -0.67
LINC01578-205ENST00000555227 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC01578-205ENST00000555227 FKBPLQ9UIM3 349 aa10.88□□□□□ -0.67
LINC01578-205ENST00000555227 ZC3H4Q9UPT8 1303 aaKnown RBP10.87□□□□□ -0.67
LINC01578-205ENST00000555227 PPP2R2DQ66LE6 453 aa10.87□□□□□ -0.67
LINC01578-205ENST00000555227 PDXDC2PQ6P474 469 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms