RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ZNF511Q8NB15 262 aa8.43□□□□□ -1.06
ATXN3-227ENST00000554491 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
ATXN3-227ENST00000554491 TRIM46Q7Z4K8 759 aa8.42□□□□□ -1.06
ATXN3-227ENST00000554491 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
ATXN3-227ENST00000554491 CAPN5O15484 640 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-227ENST00000554491 CTHP32929 405 aa8.41□□□□□ -1.06
ATXN3-227ENST00000554491 DIXDC1Q155Q3 683 aa8.41□□□□□ -1.06
ATXN3-227ENST00000554491 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
ATXN3-227ENST00000554491 MAP10Q9P2G4 905 aa8.41□□□□□ -1.06
ATXN3-227ENST00000554491 TERTO14746 1132 aaKnown RBP8.4□□□□□ -1.06
ATXN3-227ENST00000554491 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
ATXN3-227ENST00000554491 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.06
ATXN3-227ENST00000554491 LIMD1Q9UGP4 676 aa8.4□□□□□ -1.06
ATXN3-227ENST00000554491 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-227ENST00000554491 VARSP26640 1264 aaKnown RBP8.39□□□□□ -1.07
ATXN3-227ENST00000554491 PDE4DQ08499 809 aa8.39□□□□□ -1.07
ATXN3-227ENST00000554491 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-227ENST00000554491 QPCTQ16769 361 aa8.38□□□□□ -1.07
ATXN3-227ENST00000554491 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
ATXN3-227ENST00000554491 FOXJ1Q92949 421 aa8.38□□□□□ -1.07
ATXN3-227ENST00000554491 PRPF38BQ5VTL8 546 aaKnown RBP8.37□□□□□ -1.07
ATXN3-227ENST00000554491 SLC24A3Q9HC58 644 aa8.37□□□□□ -1.07
ATXN3-227ENST00000554491 NNTQ13423 1086 aa8.36□□□□□ -1.07
ATXN3-227ENST00000554491 WIPF1O43516 503 aa8.35□□□□□ -1.07
ATXN3-227ENST00000554491 TSC1Q92574 1164 aa8.35□□□□□ -1.07
ATXN3-227ENST00000554491 RB1CC1Q8TDY2 1594 aa8.35□□□□□ -1.07
ATXN3-227ENST00000554491 PLEKHG3A1L390 1219 aa8.34□□□□□ -1.07
ATXN3-227ENST00000554491 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-227ENST00000554491 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-227ENST00000554491 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
ATXN3-227ENST00000554491 NUTM2DQ5VT03 806 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-227ENST00000554491 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-227ENST00000554491 MPNDQ8N594 471 aa8.34□□□□□ -1.07
ATXN3-227ENST00000554491 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
ATXN3-227ENST00000554491 LILRB3O75022 631 aa8.33□□□□□ -1.08
ATXN3-227ENST00000554491 TIMP2P16035 220 aa8.33□□□□□ -1.08
ATXN3-227ENST00000554491 ARID5BQ14865 1188 aa8.33□□□□□ -1.08
ATXN3-227ENST00000554491 FAM174AQ8TBP5 190 aa8.33□□□□□ -1.08
ATXN3-227ENST00000554491 KLF16Q9BXK1 252 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-227ENST00000554491 ADH1CP00326 375 aa8.32□□□□□ -1.08
ATXN3-227ENST00000554491 WDR4P57081 412 aaKnown RBP8.32□□□□□ -1.08
ATXN3-227ENST00000554491 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-227ENST00000554491 VEGFBP49765 207 aa8.31□□□□□ -1.08
ATXN3-227ENST00000554491 CDK15Q96Q40 435 aa8.31□□□□□ -1.08
ATXN3-227ENST00000554491 NXF1Q9UBU9 619 aaKnown RBP8.31□□□□□ -1.08
ATXN3-227ENST00000554491 NR3C2P08235 984 aa8.3□□□□□ -1.08
ATXN3-227ENST00000554491 AGERQ15109 404 aa8.3□□□□□ -1.08
ATXN3-227ENST00000554491 TUSC1Q2TAM9 212 aa8.3□□□□□ -1.08
ATXN3-227ENST00000554491 MRPL14Q6P1L8 145 aaKnown RBP8.3□□□□□ -1.08
ATXN3-227ENST00000554491 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
ATXN3-227ENST00000554491 GRM5P41594 1212 aa8.29□□□□□ -1.08
ATXN3-227ENST00000554491 PURBQ96QR8 312 aaKnown RBP8.29□□□□□ -1.08
ATXN3-227ENST00000554491 ZFAND3Q9H8U3 227 aa8.29□□□□□ -1.08
ATXN3-227ENST00000554491 SOBPA7XYQ1 873 aa8.28□□□□□ -1.08
ATXN3-227ENST00000554491 CLK2P49760 499 aaKnown RBP8.28□□□□□ -1.08
ATXN3-227ENST00000554491 INSM1Q01101 510 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-227ENST00000554491 BPHLQ86WA6 291 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-227ENST00000554491 ITPKCQ96DU7 683 aa8.28□□□□□ -1.08
ATXN3-227ENST00000554491 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-227ENST00000554491 STK17AQ9UEE5 414 aa8.27□□□□□ -1.09
ATXN3-227ENST00000554491 GMPRP36959 345 aa8.26□□□□□ -1.09
ATXN3-227ENST00000554491 SCARF1Q14162 830 aa8.26□□□□□ -1.09
ATXN3-227ENST00000554491 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-227ENST00000554491 SLC16A10Q8TF71 515 aa8.26□□□□□ -1.09
ATXN3-227ENST00000554491 ERBB4Q15303 1308 aa8.26□□□□□ -1.09
ATXN3-227ENST00000554491 H3BM21 787 aa8.25□□□□□ -1.09
ATXN3-227ENST00000554491 NR5A1Q13285 461 aa8.25□□□□□ -1.09
ATXN3-227ENST00000554491 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
ATXN3-227ENST00000554491 C1QTNF2Q9BXJ5 285 aa8.25□□□□□ -1.09
ATXN3-227ENST00000554491 UNC13AQ9UPW8 1703 aa8.25□□□□□ -1.09
ATXN3-227ENST00000554491 CTDSPL2Q05D32 466 aa8.24□□□□□ -1.09
ATXN3-227ENST00000554491 C6orf118Q5T5N4 469 aa8.24□□□□□ -1.09
ATXN3-227ENST00000554491 FBXO31Q5XUX0 539 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-227ENST00000554491 SH3BP5LQ7L8J4 393 aa8.24□□□□□ -1.09
ATXN3-227ENST00000554491 MAGEB6P1A0A0J9YX57 407 aa8.23□□□□□ -1.09
ATXN3-227ENST00000554491 NPAS3Q8IXF0 933 aa8.23□□□□□ -1.09
ATXN3-227ENST00000554491 ARMC2Q8NEN0 867 aa8.23□□□□□ -1.09
ATXN3-227ENST00000554491 RSPH6AQ9H0K4 717 aa8.23□□□□□ -1.09
ATXN3-227ENST00000554491 FSHRP23945 695 aa8.22□□□□□ -1.09
ATXN3-227ENST00000554491 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
ATXN3-227ENST00000554491 IRF7Q92985 503 aa8.22□□□□□ -1.09
ATXN3-227ENST00000554491 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
ATXN3-227ENST00000554491 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-227ENST00000554491 VASH1Q7L8A9 365 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-227ENST00000554491 LRRN4Q8WUT4 740 aa8.21□□□□□ -1.1
ATXN3-227ENST00000554491 GPBP1L1Q9HC44 474 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-227ENST00000554491 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
ATXN3-227ENST00000554491 MEIOBQ8N635 442 aa8.2□□□□□ -1.1
ATXN3-227ENST00000554491 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-227ENST00000554491 MAP4K5Q9Y4K4 846 aa8.19□□□□□ -1.1
ATXN3-227ENST00000554491 MAN1A2O60476 641 aa8.18□□□□□ -1.1
ATXN3-227ENST00000554491 BMP2P12643 396 aa8.18□□□□□ -1.1
ATXN3-227ENST00000554491 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
ATXN3-227ENST00000554491 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
ATXN3-227ENST00000554491 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
ATXN3-227ENST00000554491 KDM4CQ9H3R0 1056 aa8.18□□□□□ -1.1
ATXN3-227ENST00000554491 SKIV2LQ15477 1246 aaKnown RBP8.17□□□□□ -1.1
ATXN3-227ENST00000554491 NACADO15069 1562 aa8.17□□□□□ -1.1
ATXN3-227ENST00000554491 NR6A1Q15406 480 aa8.16□□□□□ -1.1
ATXN3-227ENST00000554491 CCDC116Q8IYX3 515 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms