RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 PKDCCQ504Y2 493 aa8.01□□□□□ -1.13
PCNX4-206ENST00000553513 RC3H1Q5TC82 1133 aaKnown RBP8.01□□□□□ -1.13
PCNX4-206ENST00000553513 FBXO31Q5XUX0 539 aaPredicted RBP8.01□□□□□ -1.13
PCNX4-206ENST00000553513 BAP1Q92560 729 aa8.01□□□□□ -1.13
PCNX4-206ENST00000553513 MRGPRX2Q96LB1 330 aa8.01□□□□□ -1.13
PCNX4-206ENST00000553513 FAM187AA6NFU0 413 aa8□□□□□ -1.13
PCNX4-206ENST00000553513 DGAT1O75907 488 aa8□□□□□ -1.13
PCNX4-206ENST00000553513 SH3BP2P78314 561 aa8□□□□□ -1.13
PCNX4-206ENST00000553513 LINC01559Q495D7 138 aa8□□□□□ -1.13
PCNX4-206ENST00000553513 ZNF511Q8NB15 262 aa8□□□□□ -1.13
PCNX4-206ENST00000553513 ARMC2Q8NEN0 867 aa8□□□□□ -1.13
PCNX4-206ENST00000553513 TOR4AQ9NXH8 423 aa8□□□□□ -1.13
PCNX4-206ENST00000553513 TTC24A2A3L6 582 aaPredicted RBP7.99□□□□□ -1.13
PCNX4-206ENST00000553513 AP1G2O75843 785 aa7.99□□□□□ -1.13
PCNX4-206ENST00000553513 RFC5P40937 340 aa7.99□□□□□ -1.13
PCNX4-206ENST00000553513 EHBP1Q8NDI1 1231 aa7.99□□□□□ -1.13
PCNX4-206ENST00000553513 SNIP1Q8TAD8 396 aaKnown RBP7.99□□□□□ -1.13
PCNX4-206ENST00000553513 TMEM259Q4ZIN3 620 aa7.97□□□□□ -1.13
PCNX4-206ENST00000553513 TRAF7Q6Q0C0 670 aa7.97□□□□□ -1.13
PCNX4-206ENST00000553513 NBPF14Q5TI25 921 aa7.96□□□□□ -1.14
PCNX4-206ENST00000553513 LRRN4Q8WUT4 740 aa7.96□□□□□ -1.14
PCNX4-206ENST00000553513 USP17L8P0C7I0 530 aa7.95□□□□□ -1.14
PCNX4-206ENST00000553513 VARSP26640 1264 aaKnown RBP7.95□□□□□ -1.14
PCNX4-206ENST00000553513 GPKOWQ92917 476 aaPredicted RBP eCLIP7.94□□□□□ -1.14
PCNX4-206ENST00000553513 SIAH2O43255 324 aa7.93□□□□□ -1.14
PCNX4-206ENST00000553513 SMPD1P17405 629 aa7.93□□□□□ -1.14
PCNX4-206ENST00000553513 MYT1Q01538 1121 aa7.93□□□□□ -1.14
PCNX4-206ENST00000553513 AGERQ15109 404 aa7.93□□□□□ -1.14
PCNX4-206ENST00000553513 BPHLQ86WA6 291 aaPredicted RBP7.93□□□□□ -1.14
PCNX4-206ENST00000553513 PNMA1Q8ND90 353 aa7.93□□□□□ -1.14
PCNX4-206ENST00000553513 J3QL48 77 aa7.92□□□□□ -1.14
PCNX4-206ENST00000553513 LCE2BO14633 110 aa7.92□□□□□ -1.14
PCNX4-206ENST00000553513 ALDH1A1P00352 501 aa7.92□□□□□ -1.14
PCNX4-206ENST00000553513 NR6A1Q15406 480 aa7.92□□□□□ -1.14
PCNX4-206ENST00000553513 FAM174AQ8TBP5 190 aa7.92□□□□□ -1.14
PCNX4-206ENST00000553513 FOXJ1Q92949 421 aa7.92□□□□□ -1.14
PCNX4-206ENST00000553513 FKBPLQ9UIM3 349 aa7.92□□□□□ -1.14
PCNX4-206ENST00000553513 AVPP01185 164 aa7.91□□□□□ -1.14
PCNX4-206ENST00000553513 ZC3H4Q9UPT8 1303 aaKnown RBP7.91□□□□□ -1.14
PCNX4-206ENST00000553513 CTC1Q2NKJ3 1217 aa7.9□□□□□ -1.14
PCNX4-206ENST00000553513 MPNDQ8N594 471 aa7.9□□□□□ -1.14
PCNX4-206ENST00000553513 HMX1Q9NP08 348 aaPredicted RBP7.9□□□□□ -1.14
PCNX4-206ENST00000553513 WASF2Q9Y6W5 498 aa7.9□□□□□ -1.14
PCNX4-206ENST00000553513 PDXDC2PQ6P474 469 aa7.89□□□□□ -1.15
PCNX4-206ENST00000553513 SH3BP5LQ7L8J4 393 aa7.89□□□□□ -1.15
PCNX4-206ENST00000553513 SH3RF1Q7Z6J0 888 aa7.89□□□□□ -1.15
PCNX4-206ENST00000553513 CRIPAKQ8N1N5 446 aa7.89□□□□□ -1.15
PCNX4-206ENST00000553513 BANK1Q8NDB2 785 aa7.89□□□□□ -1.15
PCNX4-206ENST00000553513 TLL2Q9Y6L7 1015 aa7.89□□□□□ -1.15
PCNX4-206ENST00000553513 C4orf48Q5BLP8 95 aa7.88□□□□□ -1.15
PCNX4-206ENST00000553513 MAGEB6P1A0A0J9YX57 407 aa7.87□□□□□ -1.15
PCNX4-206ENST00000553513 AXIN1O15169 862 aa7.87□□□□□ -1.15
PCNX4-206ENST00000553513 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
PCNX4-206ENST00000553513 EPS8L1Q8TE68 723 aa7.87□□□□□ -1.15
PCNX4-206ENST00000553513 ARHGAP9Q9BRR9 750 aa7.87□□□□□ -1.15
PCNX4-206ENST00000553513 AAASQ9NRG9 546 aa7.87□□□□□ -1.15
PCNX4-206ENST00000553513 SOCS7O14512 581 aa7.86□□□□□ -1.15
PCNX4-206ENST00000553513 ST8SIA5O15466 376 aa7.86□□□□□ -1.15
PCNX4-206ENST00000553513 PTK2Q05397 1052 aa7.86□□□□□ -1.15
PCNX4-206ENST00000553513 HPS1Q92902 700 aa7.86□□□□□ -1.15
PCNX4-206ENST00000553513 CDK15Q96Q40 435 aa7.86□□□□□ -1.15
PCNX4-206ENST00000553513 C1QTNF2Q9BXJ5 285 aa7.86□□□□□ -1.15
PCNX4-206ENST00000553513 CARD14Q9BXL6 1004 aa7.86□□□□□ -1.15
PCNX4-206ENST00000553513 GPSM3Q9Y4H4 160 aa7.86□□□□□ -1.15
PCNX4-206ENST00000553513 APBB1O00213 710 aa7.85□□□□□ -1.15
PCNX4-206ENST00000553513 ADH1CP00326 375 aa7.85□□□□□ -1.15
PCNX4-206ENST00000553513 ARID5BQ14865 1188 aa7.85□□□□□ -1.15
PCNX4-206ENST00000553513 TRMT44Q8IYL2 757 aaKnown RBP7.85□□□□□ -1.15
PCNX4-206ENST00000553513 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
PCNX4-206ENST00000553513 ZBTB33Q86T24 672 aa7.84□□□□□ -1.15
PCNX4-206ENST00000553513 NNTQ13423 1086 aa7.83□□□□□ -1.16
PCNX4-206ENST00000553513 ERFEQ4G0M1 354 aa7.83□□□□□ -1.16
PCNX4-206ENST00000553513 GJD4Q96KN9 370 aaPredicted RBP7.83□□□□□ -1.16
PCNX4-206ENST00000553513 MAP4K5Q9Y4K4 846 aa7.83□□□□□ -1.16
PCNX4-206ENST00000553513 NR5A1Q13285 461 aa7.82□□□□□ -1.16
PCNX4-206ENST00000553513 VASH1Q7L8A9 365 aaPredicted RBP7.82□□□□□ -1.16
PCNX4-206ENST00000553513 SLC10A4Q96EP9 437 aa7.82□□□□□ -1.16
PCNX4-206ENST00000553513 CDV3Q9UKY7 258 aaKnown RBP7.82□□□□□ -1.16
PCNX4-206ENST00000553513 MTMR14Q8NCE2 650 aa7.81□□□□□ -1.16
PCNX4-206ENST00000553513 GRM5P41594 1212 aa7.8□□□□□ -1.16
PCNX4-206ENST00000553513 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
PCNX4-206ENST00000553513 ADAM32Q8TC27 787 aa7.8□□□□□ -1.16
PCNX4-206ENST00000553513 SNRKQ9NRH2 765 aa7.8□□□□□ -1.16
PCNX4-206ENST00000553513 NDUFB9Q9Y6M9 179 aa7.8□□□□□ -1.16
PCNX4-206ENST00000553513 CAPN5O15484 640 aaPredicted RBP7.79□□□□□ -1.16
PCNX4-206ENST00000553513 FSHRP23945 695 aa7.79□□□□□ -1.16
PCNX4-206ENST00000553513 OCSTAMPQ9BR26 566 aa7.79□□□□□ -1.16
PCNX4-206ENST00000553513 ZBBXA8MT70 800 aa7.78□□□□□ -1.16
PCNX4-206ENST00000553513 PRM3Q9NNZ6 103 aa7.78□□□□□ -1.16
PCNX4-206ENST00000553513 ATP13A2Q9NQ11 1180 aa7.78□□□□□ -1.16
PCNX4-206ENST00000553513 DACH1Q9UI36 760 aa7.78□□□□□ -1.16
PCNX4-206ENST00000553513 NR3C2P08235 984 aa7.77□□□□□ -1.17
PCNX4-206ENST00000553513 WDR4P57081 412 aaKnown RBP7.77□□□□□ -1.17
PCNX4-206ENST00000553513 NBPF20Q3BBV1 942 aa7.77□□□□□ -1.17
PCNX4-206ENST00000553513 DZIP3Q86Y13 1208 aaKnown RBP7.77□□□□□ -1.17
PCNX4-206ENST00000553513 TIMP2P16035 220 aa7.76□□□□□ -1.17
PCNX4-206ENST00000553513 TMEM132AQ24JP5 1023 aa7.76□□□□□ -1.17
PCNX4-206ENST00000553513 CCDC116Q8IYX3 515 aa7.76□□□□□ -1.17
PCNX4-206ENST00000553513 KCTD15Q96SI1 283 aaPredicted RBP7.76□□□□□ -1.17
PCNX4-206ENST00000553513 ZIC2O95409 532 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms