RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 WNT7BP56706 349 aa14.51□□□□□ -0.09
PCNX1-205ENST00000553508 RC3H1Q5TC82 1133 aaKnown RBP14.51□□□□□ -0.09
PCNX1-205ENST00000553508 ZNF511Q8NB15 262 aa14.5□□□□□ -0.09
PCNX1-205ENST00000553508 EPS8L1Q8TE68 723 aa14.5□□□□□ -0.09
PCNX1-205ENST00000553508 WNT7AO00755 349 aa14.48□□□□□ -0.09
PCNX1-205ENST00000553508 TMEM132AQ24JP5 1023 aa14.48□□□□□ -0.09
PCNX1-205ENST00000553508 MRGPRX2Q96LB1 330 aa14.48□□□□□ -0.09
PCNX1-205ENST00000553508 EHBP1Q8NDI1 1231 aa14.47□□□□□ -0.09
PCNX1-205ENST00000553508 PRR20EP86478 221 aa14.46□□□□□ -0.09
PCNX1-205ENST00000553508 PRR20CP86479 221 aa14.46□□□□□ -0.09
PCNX1-205ENST00000553508 PRR20DP86480 221 aa14.46□□□□□ -0.09
PCNX1-205ENST00000553508 PRR20BP86481 221 aa14.46□□□□□ -0.09
PCNX1-205ENST00000553508 PRR20AP86496 221 aa14.46□□□□□ -0.09
PCNX1-205ENST00000553508 AGERQ15109 404 aa14.46□□□□□ -0.09
PCNX1-205ENST00000553508 ARMC2Q8NEN0 867 aa14.46□□□□□ -0.09
PCNX1-205ENST00000553508 FOXJ1Q92949 421 aa14.46□□□□□ -0.09
PCNX1-205ENST00000553508 CYP4X1Q8N118 509 aa14.45□□□□□ -0.1
PCNX1-205ENST00000553508 NRG2O14511 850 aaPredicted RBP14.44□□□□□ -0.1
PCNX1-205ENST00000553508 SNRKQ9NRH2 765 aa14.44□□□□□ -0.1
PCNX1-205ENST00000553508 LAPTM4AQ15012 233 aa14.43□□□□□ -0.1
PCNX1-205ENST00000553508 BANK1Q8NDB2 785 aa14.43□□□□□ -0.1
PCNX1-205ENST00000553508 TTC24A2A3L6 582 aaPredicted RBP14.42□□□□□ -0.1
PCNX1-205ENST00000553508 FKBPLQ9UIM3 349 aa14.42□□□□□ -0.1
PCNX1-205ENST00000553508 NBPF14Q5TI25 921 aa14.41□□□□□ -0.1
PCNX1-205ENST00000553508 Q6ZNB5 142 aa14.41□□□□□ -0.1
PCNX1-205ENST00000553508 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
PCNX1-205ENST00000553508 FAM187AA6NFU0 413 aa14.39□□□□□ -0.11
PCNX1-205ENST00000553508 TOR4AQ9NXH8 423 aa14.39□□□□□ -0.11
PCNX1-205ENST00000553508 MAGEB6P1A0A0J9YX57 407 aa14.38□□□□□ -0.11
PCNX1-205ENST00000553508 SNIP1Q8TAD8 396 aaKnown RBP14.38□□□□□ -0.11
PCNX1-205ENST00000553508 VARSP26640 1264 aaKnown RBP14.37□□□□□ -0.11
PCNX1-205ENST00000553508 C4orf48Q5BLP8 95 aa14.37□□□□□ -0.11
PCNX1-205ENST00000553508 BPHLQ86WA6 291 aaPredicted RBP14.37□□□□□ -0.11
PCNX1-205ENST00000553508 MTMR14Q8NCE2 650 aa14.37□□□□□ -0.11
PCNX1-205ENST00000553508 GJD4Q96KN9 370 aaPredicted RBP14.37□□□□□ -0.11
PCNX1-205ENST00000553508 CARD14Q9BXL6 1004 aa14.37□□□□□ -0.11
PCNX1-205ENST00000553508 J3QL48 77 aa14.35□□□□□ -0.11
PCNX1-205ENST00000553508 SIAH2O43255 324 aa14.35□□□□□ -0.11
PCNX1-205ENST00000553508 ALDH1A1P00352 501 aa14.35□□□□□ -0.11
PCNX1-205ENST00000553508 PKDCCQ504Y2 493 aa14.35□□□□□ -0.11
PCNX1-205ENST00000553508 PNMA1Q8ND90 353 aa14.35□□□□□ -0.11
PCNX1-205ENST00000553508 GPKOWQ92917 476 aaPredicted RBP eCLIP14.35□□□□□ -0.11
PCNX1-205ENST00000553508 TLL2Q9Y6L7 1015 aa14.34□□□□□ -0.11
PCNX1-205ENST00000553508 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
PCNX1-205ENST00000553508 SH3BP5LQ7L8J4 393 aa14.33□□□□□ -0.12
PCNX1-205ENST00000553508 FAM174AQ8TBP5 190 aa14.33□□□□□ -0.12
PCNX1-205ENST00000553508 ARID5BQ14865 1188 aa14.32□□□□□ -0.12
PCNX1-205ENST00000553508 ARHGAP9Q9BRR9 750 aa14.32□□□□□ -0.12
PCNX1-205ENST00000553508 SH3RF1Q7Z6J0 888 aa14.31□□□□□ -0.12
PCNX1-205ENST00000553508 SMPD1P17405 629 aa14.3□□□□□ -0.12
PCNX1-205ENST00000553508 ZC3H4Q9UPT8 1303 aaKnown RBP14.3□□□□□ -0.12
PCNX1-205ENST00000553508 PTK2Q05397 1052 aa14.29□□□□□ -0.12
PCNX1-205ENST00000553508 ZBTB33Q86T24 672 aa14.29□□□□□ -0.12
PCNX1-205ENST00000553508 DGAT1O75907 488 aa14.28□□□□□ -0.12
PCNX1-205ENST00000553508 WASF2Q9Y6W5 498 aa14.28□□□□□ -0.12
PCNX1-205ENST00000553508 APBB1O00213 710 aa14.27□□□□□ -0.13
PCNX1-205ENST00000553508 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.13
PCNX1-205ENST00000553508 ERFEQ4G0M1 354 aa14.26□□□□□ -0.13
PCNX1-205ENST00000553508 OCSTAMPQ9BR26 566 aa14.26□□□□□ -0.13
PCNX1-205ENST00000553508 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
PCNX1-205ENST00000553508 MCM6Q14566 821 aa14.24□□□□□ -0.13
PCNX1-205ENST00000553508 TRAF7Q6Q0C0 670 aa14.24□□□□□ -0.13
PCNX1-205ENST00000553508 HPS1Q92902 700 aa14.24□□□□□ -0.13
PCNX1-205ENST00000553508 ADAM32Q8TC27 787 aa14.23□□□□□ -0.13
PCNX1-205ENST00000553508 C1QTNF2Q9BXJ5 285 aa14.23□□□□□ -0.13
PCNX1-205ENST00000553508 SOCS7O14512 581 aa14.22□□□□□ -0.13
PCNX1-205ENST00000553508 MYT1Q01538 1121 aa14.22□□□□□ -0.13
PCNX1-205ENST00000553508 GPSM3Q9Y4H4 160 aa14.22□□□□□ -0.13
PCNX1-205ENST00000553508 LCE2BO14633 110 aa14.21□□□□□ -0.13
PCNX1-205ENST00000553508 PRM3Q9NNZ6 103 aa14.21□□□□□ -0.13
PCNX1-205ENST00000553508 ZBBXA8MT70 800 aa14.2□□□□□ -0.14
PCNX1-205ENST00000553508 VASH1Q7L8A9 365 aaPredicted RBP14.2□□□□□ -0.14
PCNX1-205ENST00000553508 CDK15Q96Q40 435 aa14.2□□□□□ -0.14
PCNX1-205ENST00000553508 GDPD2Q9HCC8 539 aa14.2□□□□□ -0.14
PCNX1-205ENST00000553508 ST8SIA5O15466 376 aa14.19□□□□□ -0.14
PCNX1-205ENST00000553508 GPR37L1O60883 481 aa14.19□□□□□ -0.14
PCNX1-205ENST00000553508 FBXO45P0C2W1 286 aa14.19□□□□□ -0.14
PCNX1-205ENST00000553508 MPNDQ8N594 471 aa14.19□□□□□ -0.14
PCNX1-205ENST00000553508 SLC10A4Q96EP9 437 aa14.19□□□□□ -0.14
PCNX1-205ENST00000553508 ADH1CP00326 375 aa14.18□□□□□ -0.14
PCNX1-205ENST00000553508 NNTQ13423 1086 aa14.18□□□□□ -0.14
PCNX1-205ENST00000553508 TRMT44Q8IYL2 757 aaKnown RBP14.18□□□□□ -0.14
PCNX1-205ENST00000553508 ABL2P42684 1182 aa14.17□□□□□ -0.14
PCNX1-205ENST00000553508 DZIP3Q86Y13 1208 aaKnown RBP14.17□□□□□ -0.14
PCNX1-205ENST00000553508 AVPP01185 164 aa14.16□□□□□ -0.14
PCNX1-205ENST00000553508 GRM5P41594 1212 aa14.16□□□□□ -0.14
PCNX1-205ENST00000553508 FSHRP23945 695 aa14.15□□□□□ -0.14
PCNX1-205ENST00000553508 FLIIQ13045 1269 aa14.15□□□□□ -0.14
PCNX1-205ENST00000553508 PCDHB9Q9Y5E1 797 aa14.15□□□□□ -0.14
PCNX1-205ENST00000553508 AXIN1O15169 862 aa14.14□□□□□ -0.15
PCNX1-205ENST00000553508 NR3C2P08235 984 aa14.13□□□□□ -0.15
PCNX1-205ENST00000553508 NR1H3Q13133 447 aa14.13□□□□□ -0.15
PCNX1-205ENST00000553508 AAASQ9NRG9 546 aa14.13□□□□□ -0.15
PCNX1-205ENST00000553508 NR5A1Q13285 461 aa14.12□□□□□ -0.15
PCNX1-205ENST00000553508 POM121Q96HA1 1249 aa14.12□□□□□ -0.15
PCNX1-205ENST00000553508 KCTD15Q96SI1 283 aaPredicted RBP14.12□□□□□ -0.15
PCNX1-205ENST00000553508 MAP4K5Q9Y4K4 846 aa14.12□□□□□ -0.15
PCNX1-205ENST00000553508 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
PCNX1-205ENST00000553508 RAB15P59190 212 aa14.11□□□□□ -0.15
PCNX1-205ENST00000553508 COG6Q9Y2V7 657 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms