RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-220ENST00000553491 SKOR1P84550 965 aa8.39□□□□□ -1.07
ATXN3-220ENST00000553491 BAZ1BQ9UIG0 1483 aaKnown RBP8.38□□□□□ -1.07
ATXN3-220ENST00000553491 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
ATXN3-220ENST00000553491 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-220ENST00000553491 KCNH2Q12809 1159 aa8.38□□□□□ -1.07
ATXN3-220ENST00000553491 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
ATXN3-220ENST00000553491 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
ATXN3-220ENST00000553491 GOPCQ9HD26 462 aa8.37□□□□□ -1.07
ATXN3-220ENST00000553491 TOR4AQ9NXH8 423 aa8.37□□□□□ -1.07
ATXN3-220ENST00000553491 NUTM2BA6NNL0 878 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-220ENST00000553491 NUTM2EB1AL46 878 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-220ENST00000553491 WNT7AO00755 349 aa8.36□□□□□ -1.07
ATXN3-220ENST00000553491 FOXC1Q12948 553 aa8.36□□□□□ -1.07
ATXN3-220ENST00000553491 NUTM2DQ5VT03 806 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-220ENST00000553491 Q6ZNB5 142 aa8.36□□□□□ -1.07
ATXN3-220ENST00000553491 NUTM2AQ8IVF1 878 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-220ENST00000553491 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
ATXN3-220ENST00000553491 UNC93B1Q9H1C4 597 aa8.36□□□□□ -1.07
ATXN3-220ENST00000553491 WNT7BP56706 349 aa8.35□□□□□ -1.07
ATXN3-220ENST00000553491 MAP10Q9P2G4 905 aa8.34□□□□□ -1.07
ATXN3-220ENST00000553491 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
ATXN3-220ENST00000553491 SH3BP2P78314 561 aa8.33□□□□□ -1.08
ATXN3-220ENST00000553491 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
ATXN3-220ENST00000553491 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
ATXN3-220ENST00000553491 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
ATXN3-220ENST00000553491 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
ATXN3-220ENST00000553491 TIMELESSQ9UNS1 1208 aa8.32□□□□□ -1.08
ATXN3-220ENST00000553491 PEG3Q9GZU2 1588 aa8.31□□□□□ -1.08
ATXN3-220ENST00000553491 RSF1Q96T23 1441 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-220ENST00000553491 DGAT1O75907 488 aa8.31□□□□□ -1.08
ATXN3-220ENST00000553491 TRAF7Q6Q0C0 670 aa8.31□□□□□ -1.08
ATXN3-220ENST00000553491 BAP1Q92560 729 aa8.31□□□□□ -1.08
ATXN3-220ENST00000553491 TSC1Q92574 1164 aa8.31□□□□□ -1.08
ATXN3-220ENST00000553491 SIAH2O43255 324 aa8.3□□□□□ -1.08
ATXN3-220ENST00000553491 CTHP32929 405 aa8.3□□□□□ -1.08
ATXN3-220ENST00000553491 MYT1Q01538 1121 aa8.29□□□□□ -1.08
ATXN3-220ENST00000553491 ZNF511Q8NB15 262 aa8.29□□□□□ -1.08
ATXN3-220ENST00000553491 HELBQ8NG08 1087 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-220ENST00000553491 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
ATXN3-220ENST00000553491 SMPD1P17405 629 aa8.28□□□□□ -1.08
ATXN3-220ENST00000553491 RFC5P40937 340 aa8.28□□□□□ -1.08
ATXN3-220ENST00000553491 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
ATXN3-220ENST00000553491 CYP4X1Q8N118 509 aa8.28□□□□□ -1.08
ATXN3-220ENST00000553491 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
ATXN3-220ENST00000553491 NESP48681 1621 aa8.28□□□□□ -1.08
ATXN3-220ENST00000553491 ERCC6Q03468 1493 aa8.27□□□□□ -1.09
ATXN3-220ENST00000553491 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
ATXN3-220ENST00000553491 AVPP01185 164 aa8.27□□□□□ -1.09
ATXN3-220ENST00000553491 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
ATXN3-220ENST00000553491 J3QL48 77 aa8.26□□□□□ -1.09
ATXN3-220ENST00000553491 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-220ENST00000553491 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
ATXN3-220ENST00000553491 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
ATXN3-220ENST00000553491 TTC24A2A3L6 582 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-220ENST00000553491 CRIPAKQ8N1N5 446 aa8.24□□□□□ -1.09
ATXN3-220ENST00000553491 EHBP1Q8NDI1 1231 aa8.24□□□□□ -1.09
ATXN3-220ENST00000553491 KIF21AQ7Z4S6 1674 aa8.24□□□□□ -1.09
ATXN3-220ENST00000553491 TOP2AP11388 1531 aaKnown RBP8.24□□□□□ -1.09
ATXN3-220ENST00000553491 AP1G2O75843 785 aa8.23□□□□□ -1.09
ATXN3-220ENST00000553491 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
ATXN3-220ENST00000553491 SH3RF1Q7Z6J0 888 aa8.23□□□□□ -1.09
ATXN3-220ENST00000553491 MPNDQ8N594 471 aa8.23□□□□□ -1.09
ATXN3-220ENST00000553491 HMX1Q9NP08 348 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-220ENST00000553491 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
ATXN3-220ENST00000553491 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
ATXN3-220ENST00000553491 NR6A1Q15406 480 aa8.22□□□□□ -1.09
ATXN3-220ENST00000553491 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
ATXN3-220ENST00000553491 ATP1B4Q9UN42 357 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-220ENST00000553491 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-220ENST00000553491 SH3BP5LQ7L8J4 393 aa8.21□□□□□ -1.1
ATXN3-220ENST00000553491 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
ATXN3-220ENST00000553491 LAMC3Q9Y6N6 1575 aa8.21□□□□□ -1.1
ATXN3-220ENST00000553491 ST8SIA5O15466 376 aa8.2□□□□□ -1.1
ATXN3-220ENST00000553491 ALDH1A1P00352 501 aa8.2□□□□□ -1.1
ATXN3-220ENST00000553491 TMEM259Q4ZIN3 620 aa8.2□□□□□ -1.1
ATXN3-220ENST00000553491 ERICH6Q7L0X2 663 aa8.2□□□□□ -1.1
ATXN3-220ENST00000553491 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
ATXN3-220ENST00000553491 HPS1Q92902 700 aa8.2□□□□□ -1.1
ATXN3-220ENST00000553491 C1QTNF2Q9BXJ5 285 aa8.2□□□□□ -1.1
ATXN3-220ENST00000553491 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
ATXN3-220ENST00000553491 OCSTAMPQ9BR26 566 aa8.19□□□□□ -1.1
ATXN3-220ENST00000553491 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
ATXN3-220ENST00000553491 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
ATXN3-220ENST00000553491 TLL2Q9Y6L7 1015 aa8.19□□□□□ -1.1
ATXN3-220ENST00000553491 PRDM2Q13029 1718 aa8.18□□□□□ -1.1
ATXN3-220ENST00000553491 NBPF14Q5TI25 921 aa8.18□□□□□ -1.1
ATXN3-220ENST00000553491 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.1
ATXN3-220ENST00000553491 GJD4Q96KN9 370 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-220ENST00000553491 DACH1Q9UI36 760 aa8.18□□□□□ -1.1
ATXN3-220ENST00000553491 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
ATXN3-220ENST00000553491 CTC1Q2NKJ3 1217 aa8.17□□□□□ -1.1
ATXN3-220ENST00000553491 PDXDC2PQ6P474 469 aa8.17□□□□□ -1.1
ATXN3-220ENST00000553491 BPHLQ86WA6 291 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-220ENST00000553491 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
ATXN3-220ENST00000553491 POTECB2RU33 542 aa8.16□□□□□ -1.1
ATXN3-220ENST00000553491 FAM174AQ8TBP5 190 aa8.16□□□□□ -1.1
ATXN3-220ENST00000553491 PDS5BQ9NTI5 1447 aa8.16□□□□□ -1.1
ATXN3-220ENST00000553491 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
ATXN3-220ENST00000553491 GRM5P41594 1212 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms