RNA–Protein interactions for RNA: ENST00000551899.5

CCT2-213, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 4

Gene CCT2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-213ENST00000551899 CENPJQ9HC77 1338 aaPredicted RBP18.56■□□□□ 0.56
CCT2-213ENST00000551899 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
CCT2-213ENST00000551899 CCDC125Q86Z20 511 aa18.56■□□□□ 0.56
CCT2-213ENST00000551899 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
CCT2-213ENST00000551899 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
CCT2-213ENST00000551899 QRICH2Q9H0J4 1663 aa18.55■□□□□ 0.56
CCT2-213ENST00000551899 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
CCT2-213ENST00000551899 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
CCT2-213ENST00000551899 PLEKHG3A1L390 1219 aa18.54■□□□□ 0.56
CCT2-213ENST00000551899 CCDC9Q9Y3X0 531 aaKnown RBP18.54■□□□□ 0.56
CCT2-213ENST00000551899 NRAPQ86VF7 1730 aa18.54■□□□□ 0.56
CCT2-213ENST00000551899 TRPM1Q7Z4N2 1603 aa18.53■□□□□ 0.56
CCT2-213ENST00000551899 FAM83GA6ND36 823 aa18.53■□□□□ 0.56
CCT2-213ENST00000551899 SRPK2P78362 688 aaKnown RBP18.52■□□□□ 0.56
CCT2-213ENST00000551899 ACEP12821 1306 aa18.51■□□□□ 0.55
CCT2-213ENST00000551899 BRD4O60885 1362 aaPredicted RBP18.51■□□□□ 0.55
CCT2-213ENST00000551899 BRWD3Q6RI45 1802 aa18.51■□□□□ 0.55
CCT2-213ENST00000551899 PHRF1Q9P1Y6 1649 aaKnown RBP18.5■□□□□ 0.55
CCT2-213ENST00000551899 ONECUT3O60422 494 aaPredicted RBP18.5■□□□□ 0.55
CCT2-213ENST00000551899 NBPF8Q3BBV2 869 aa18.5■□□□□ 0.55
CCT2-213ENST00000551899 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
CCT2-213ENST00000551899 MAPK8IP2Q13387 824 aaPredicted RBP18.49■□□□□ 0.55
CCT2-213ENST00000551899 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
CCT2-213ENST00000551899 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
CCT2-213ENST00000551899 BTG4Q9NY30 223 aa18.49■□□□□ 0.55
CCT2-213ENST00000551899 ROCK2O75116 1388 aaKnown RBP18.49■□□□□ 0.55
CCT2-213ENST00000551899 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
CCT2-213ENST00000551899 SEPT12Q8IYM1 358 aa18.48■□□□□ 0.55
CCT2-213ENST00000551899 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
CCT2-213ENST00000551899 BLMP54132 1417 aaPredicted RBP18.46■□□□□ 0.55
CCT2-213ENST00000551899 CABP2Q9NPB3 220 aa18.45■□□□□ 0.54
CCT2-213ENST00000551899 EP400Q96L91 3159 aa18.45■□□□□ 0.54
CCT2-213ENST00000551899 KIAA0232Q92628 1395 aa18.44■□□□□ 0.54
CCT2-213ENST00000551899 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
CCT2-213ENST00000551899 ABTB2Q8N961 1025 aa18.44■□□□□ 0.54
CCT2-213ENST00000551899 A0A0G2JS52 829 aa18.43■□□□□ 0.54
CCT2-213ENST00000551899 MYT1Q01538 1121 aa18.43■□□□□ 0.54
CCT2-213ENST00000551899 SF3B2Q13435 895 aaKnown RBP18.43■□□□□ 0.54
CCT2-213ENST00000551899 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
CCT2-213ENST00000551899 SPATA31A5Q5VU36 1347 aa18.43■□□□□ 0.54
CCT2-213ENST00000551899 SPATA31A7Q8IWB4 1347 aa18.43■□□□□ 0.54
CCT2-213ENST00000551899 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
CCT2-213ENST00000551899 USP19O94966 1318 aa18.42■□□□□ 0.54
CCT2-213ENST00000551899 FAM98CQ17RN3 349 aaKnown RBP18.41■□□□□ 0.54
CCT2-213ENST00000551899 CPDO75976 1380 aa18.41■□□□□ 0.54
CCT2-213ENST00000551899 USP6P35125 1406 aa18.4■□□□□ 0.54
CCT2-213ENST00000551899 NUTM2GQ5VZR2 741 aa18.4■□□□□ 0.54
CCT2-213ENST00000551899 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
CCT2-213ENST00000551899 ZC3H6P61129 1189 aaKnown RBP18.39■□□□□ 0.53
CCT2-213ENST00000551899 CABP1Q9NZU7 370 aa18.39■□□□□ 0.53
CCT2-213ENST00000551899 ZRANB1Q9UGI0 708 aa18.39■□□□□ 0.53
CCT2-213ENST00000551899 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.53
CCT2-213ENST00000551899 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
CCT2-213ENST00000551899 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
CCT2-213ENST00000551899 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
CCT2-213ENST00000551899 SPATA31A1Q5TZJ5 1347 aa18.37■□□□□ 0.53
CCT2-213ENST00000551899 GCP02774 474 aa18.36■□□□□ 0.53
CCT2-213ENST00000551899 EVA1CP58658 441 aa18.36■□□□□ 0.53
CCT2-213ENST00000551899 AKAP12Q02952 1782 aa18.36■□□□□ 0.53
CCT2-213ENST00000551899 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
CCT2-213ENST00000551899 SSH2Q76I76 1423 aa18.36■□□□□ 0.53
CCT2-213ENST00000551899 LMO7Q8WWI1 1683 aa18.36■□□□□ 0.53
CCT2-213ENST00000551899 STRN4Q9NRL3 753 aa18.36■□□□□ 0.53
CCT2-213ENST00000551899 CARD11Q9BXL7 1154 aa18.35■□□□□ 0.53
CCT2-213ENST00000551899 NLRP6P59044 892 aa18.34■□□□□ 0.53
CCT2-213ENST00000551899 RGPD1P0DJD0 1748 aa18.34■□□□□ 0.53
CCT2-213ENST00000551899 SLIT3O75094 1523 aa18.33■□□□□ 0.53
CCT2-213ENST00000551899 BARGINQ6ZT62 677 aa18.33■□□□□ 0.52
CCT2-213ENST00000551899 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
CCT2-213ENST00000551899 PIK3C2AO00443 1686 aa18.32■□□□□ 0.52
CCT2-213ENST00000551899 TTC21AQ8NDW8 1320 aa18.32■□□□□ 0.52
CCT2-213ENST00000551899 BAG6P46379 1132 aa18.32■□□□□ 0.52
CCT2-213ENST00000551899 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
CCT2-213ENST00000551899 TCP11L2Q8N4U5 519 aa18.3■□□□□ 0.52
CCT2-213ENST00000551899 KCNH5Q8NCM2 988 aa18.3■□□□□ 0.52
CCT2-213ENST00000551899 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
CCT2-213ENST00000551899 AATKQ6ZMQ8 1374 aa18.3■□□□□ 0.52
CCT2-213ENST00000551899 MON2Q7Z3U7 1717 aa18.29■□□□□ 0.52
CCT2-213ENST00000551899 TTC21BQ7Z4L5 1316 aa18.29■□□□□ 0.52
CCT2-213ENST00000551899 COL5A2P05997 1499 aaPredicted RBP18.29■□□□□ 0.52
CCT2-213ENST00000551899 SLC24A1O60721 1099 aa18.29■□□□□ 0.52
CCT2-213ENST00000551899 DEFB132Q7Z7B7 95 aa18.29■□□□□ 0.52
CCT2-213ENST00000551899 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
CCT2-213ENST00000551899 FAM196AQ6ZSG2 479 aa18.28■□□□□ 0.52
CCT2-213ENST00000551899 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
CCT2-213ENST00000551899 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.52
CCT2-213ENST00000551899 USP35Q9P2H5 1018 aa18.27■□□□□ 0.52
CCT2-213ENST00000551899 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
CCT2-213ENST00000551899 CRB1P82279 1406 aa18.26■□□□□ 0.51
CCT2-213ENST00000551899 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
CCT2-213ENST00000551899 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
CCT2-213ENST00000551899 TNS1Q9HBL0 1735 aaKnown RBP18.25■□□□□ 0.51
CCT2-213ENST00000551899 PARP4Q9UKK3 1724 aaKnown RBP18.25■□□□□ 0.51
CCT2-213ENST00000551899 ABCC6O95255 1503 aa18.24■□□□□ 0.51
CCT2-213ENST00000551899 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
CCT2-213ENST00000551899 USP54Q70EL1 1684 aa18.24■□□□□ 0.51
CCT2-213ENST00000551899 COL18A1P39060 1754 aa18.24■□□□□ 0.51
CCT2-213ENST00000551899 NINLQ9Y2I6 1382 aa18.23■□□□□ 0.51
CCT2-213ENST00000551899 ZBTB7CA1YPR0 619 aa18.23■□□□□ 0.51
CCT2-213ENST00000551899 USP31Q70CQ4 1352 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms