RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 KANK1Q14678 1352 aa15.19■□□□□ 0.02
ERBB3-219ENST00000551242 TBC1D9Q6ZT07 1266 aa15.19■□□□□ 0.02
ERBB3-219ENST00000551242 ARHGAP5Q13017 1502 aa15.19■□□□□ 0.02
ERBB3-219ENST00000551242 PREX2Q70Z35 1606 aa15.19■□□□□ 0.02
ERBB3-219ENST00000551242 TTC37Q6PGP7 1564 aa15.19■□□□□ 0.02
ERBB3-219ENST00000551242 PRIM1P49642 420 aaKnown RBP15.19■□□□□ 0.02
ERBB3-219ENST00000551242 ANKRD45Q5TZF3 282 aa15.19■□□□□ 0.02
ERBB3-219ENST00000551242 MAP7D2Q96T17 732 aa15.19■□□□□ 0.02
ERBB3-219ENST00000551242 IBTKQ9P2D0 1353 aaPredicted RBP15.18■□□□□ 0.02
ERBB3-219ENST00000551242 ZNF445P59923 1031 aa15.18■□□□□ 0.02
ERBB3-219ENST00000551242 PKP1Q13835 747 aa15.18■□□□□ 0.02
ERBB3-219ENST00000551242 BMP2KLQ5H9B9 411 aa15.18■□□□□ 0.02
ERBB3-219ENST00000551242 ZBTB7CA1YPR0 619 aa15.18■□□□□ 0.02
ERBB3-219ENST00000551242 ZNF500O60304 480 aaPredicted RBP15.18■□□□□ 0.02
ERBB3-219ENST00000551242 RBM27Q9P2N5 1060 aaKnown RBP15.18■□□□□ 0.02
ERBB3-219ENST00000551242 A0A0U1RQG5 324 aaPredicted RBP15.17■□□□□ 0.02
ERBB3-219ENST00000551242 CLEC17AQ6ZS10 378 aa15.17■□□□□ 0.02
ERBB3-219ENST00000551242 SPHKAPQ2M3C7 1700 aa15.17■□□□□ 0.02
ERBB3-219ENST00000551242 PDLIM2Q96JY6 352 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 DUOX2Q9NRD8 1548 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 ADGRF5Q8IZF2 1346 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 SHROOM2Q13796 1616 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 HS1BP3Q53T59 392 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 CHAMP1Q96JM3 812 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 C1orf115Q9H7X2 142 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 LMBRD1Q9NUN5 540 aa15.16■□□□□ 0.02
ERBB3-219ENST00000551242 ZHX1Q9UKY1 873 aaPredicted RBP15.15■□□□□ 0.02
ERBB3-219ENST00000551242 ZKSCAN5Q9Y2L8 839 aa15.15■□□□□ 0.02
ERBB3-219ENST00000551242 PRPF40AO75400 957 aaKnown RBP15.14■□□□□ 0.01
ERBB3-219ENST00000551242 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
ERBB3-219ENST00000551242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.13■□□□□ 0.01
ERBB3-219ENST00000551242 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
ERBB3-219ENST00000551242 AFAP1Q8N556 730 aa15.13■□□□□ 0.01
ERBB3-219ENST00000551242 JARID2Q92833 1246 aaPredicted RBP15.13■□□□□ 0.01
ERBB3-219ENST00000551242 PTPRTO14522 1441 aa15.13■□□□□ 0.01
ERBB3-219ENST00000551242 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
ERBB3-219ENST00000551242 KIF16BQ96L93 1317 aa15.13■□□□□ 0.01
ERBB3-219ENST00000551242 CLTCL1P53675 1640 aa15.12■□□□□ 0.01
ERBB3-219ENST00000551242 DYNC1I1O14576 645 aa15.12■□□□□ 0.01
ERBB3-219ENST00000551242 GPT2Q8TD30 523 aa15.12■□□□□ 0.01
ERBB3-219ENST00000551242 STAC3Q96MF2 364 aa15.12■□□□□ 0.01
ERBB3-219ENST00000551242 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
ERBB3-219ENST00000551242 SMAP1Q8IYB5 467 aaPredicted RBP15.12■□□□□ 0.01
ERBB3-219ENST00000551242 TRAK1Q9UPV9 953 aa15.12■□□□□ 0.01
ERBB3-219ENST00000551242 SLC24A1O60721 1099 aa15.11■□□□□ 0.01
ERBB3-219ENST00000551242 RNF214Q8ND24 703 aa15.11■□□□□ 0.01
ERBB3-219ENST00000551242 TMPOP42166 694 aaKnown RBP15.11■□□□□ 0.01
ERBB3-219ENST00000551242 EFCAB2Q5VUJ9 269 aa15.11■□□□□ 0.01
ERBB3-219ENST00000551242 TRPM2O94759 1503 aa15.1■□□□□ 0.01
ERBB3-219ENST00000551242 SYCE3A1L190 88 aa15.1■□□□□ 0.01
ERBB3-219ENST00000551242 CSPP1Q1MSJ5 1256 aa15.1■□□□□ 0.01
ERBB3-219ENST00000551242 TSC1Q92574 1164 aa15.1■□□□□ 0.01
ERBB3-219ENST00000551242 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
ERBB3-219ENST00000551242 NOS1P29475 1434 aa15.1■□□□□ 0.01
ERBB3-219ENST00000551242 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
ERBB3-219ENST00000551242 IPO8O15397 1037 aaKnown RBP15.09■□□□□ 0.01
ERBB3-219ENST00000551242 NUCB2P80303 420 aa15.09■□□□□ 0.01
ERBB3-219ENST00000551242 FOXD4L5Q5VV16 416 aaPredicted RBP15.09■□□□□ 0.01
ERBB3-219ENST00000551242 SASS6Q6UVJ0 657 aa15.09■□□□□ 0.01
ERBB3-219ENST00000551242 ZGPATQ8N5A5 531 aaKnown RBP15.09■□□□□ 0.01
ERBB3-219ENST00000551242 FOXD4L4Q8WXT5 416 aaPredicted RBP15.09■□□□□ 0.01
ERBB3-219ENST00000551242 CYP2E1P05181 493 aaPredicted RBP15.09■□□□□ 0.01
ERBB3-219ENST00000551242 MPNDQ8N594 471 aa15.09■□□□□ 0.01
ERBB3-219ENST00000551242 TMEM63CQ9P1W3 806 aa15.09■□□□□ 0.01
ERBB3-219ENST00000551242 PPIP5K1Q6PFW1 1433 aa15.09■□□□□ 0.01
ERBB3-219ENST00000551242 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
ERBB3-219ENST00000551242 CDC45O75419 566 aa15.07■□□□□ 0
ERBB3-219ENST00000551242 MTERF4Q7Z6M4 381 aaKnown RBP15.07■□□□□ 0
ERBB3-219ENST00000551242 SIRT2Q8IXJ6 389 aa15.07■□□□□ 0
ERBB3-219ENST00000551242 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
ERBB3-219ENST00000551242 CCDC39Q9UFE4 941 aa15.07■□□□□ 0
ERBB3-219ENST00000551242 GSPT1P15170 499 aaKnown RBP15.06■□□□□ 0
ERBB3-219ENST00000551242 RABEP1Q15276 862 aa15.06■□□□□ 0
ERBB3-219ENST00000551242 OSCARQ8IYS5 282 aa15.06■□□□□ 0
ERBB3-219ENST00000551242 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
ERBB3-219ENST00000551242 ARHGAP31Q2M1Z3 1444 aa15.06■□□□□ 0
ERBB3-219ENST00000551242 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
ERBB3-219ENST00000551242 ABCA6Q8N139 1617 aa15.06■□□□□ 0
ERBB3-219ENST00000551242 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
ERBB3-219ENST00000551242 LRSAM1Q6UWE0 723 aa15.06■□□□□ 0
ERBB3-219ENST00000551242 GCC1Q96CN9 775 aa15.06■□□□□ 0
ERBB3-219ENST00000551242 UGGT1Q9NYU2 1555 aa15.05■□□□□ 0
ERBB3-219ENST00000551242 PTMAP06454 111 aaKnown RBP15.05■□□□□ 0
ERBB3-219ENST00000551242 MCM5P33992 734 aa15.05■□□□□ 0
ERBB3-219ENST00000551242 ABCC11Q96J66 1382 aa15.05■□□□□ -0
ERBB3-219ENST00000551242 CCDC94Q9BW85 323 aaPredicted RBP15.05■□□□□ -0
ERBB3-219ENST00000551242 DNTTIP2Q5QJE6 756 aaKnown RBP15.04■□□□□ -0
ERBB3-219ENST00000551242 TMEM132EQ6IEE7 984 aa15.04■□□□□ -0
ERBB3-219ENST00000551242 ADGRB2O60241 1585 aa15.03■□□□□ -0
ERBB3-219ENST00000551242 TRAPPC8Q9Y2L5 1435 aa15.03■□□□□ -0
ERBB3-219ENST00000551242 FAM177BA6PVY3 158 aa15.03■□□□□ -0
ERBB3-219ENST00000551242 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
ERBB3-219ENST00000551242 ZSCAN20P17040 1043 aaPredicted RBP15.03■□□□□ -0
ERBB3-219ENST00000551242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.03■□□□□ -0
ERBB3-219ENST00000551242 KIAA1210Q9ULL0 1709 aa15.03■□□□□ -0
ERBB3-219ENST00000551242 SPAG9O60271 1321 aaKnown RBP15.02■□□□□ -0
ERBB3-219ENST00000551242 PLCH2O75038 1416 aa15.02■□□□□ -0
ERBB3-219ENST00000551242 DMTNQ08495 405 aa15.02□□□□□ -0.01
ERBB3-219ENST00000551242 ZNF830Q96NB3 372 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms