RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 USP6P35125 1406 aa17.73■□□□□ 0.43
PFDN5-207ENST00000549759 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
PFDN5-207ENST00000549759 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
PFDN5-207ENST00000549759 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
PFDN5-207ENST00000549759 ITSN1Q15811 1721 aa17.72■□□□□ 0.43
PFDN5-207ENST00000549759 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
PFDN5-207ENST00000549759 ADAMTS2O95450 1211 aa17.72■□□□□ 0.43
PFDN5-207ENST00000549759 NLRP6P59044 892 aa17.72■□□□□ 0.43
PFDN5-207ENST00000549759 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
PFDN5-207ENST00000549759 NUTM2GQ5VZR2 741 aa17.7■□□□□ 0.42
PFDN5-207ENST00000549759 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.7■□□□□ 0.42
PFDN5-207ENST00000549759 CABLES1Q8TDN4 633 aa17.7■□□□□ 0.42
PFDN5-207ENST00000549759 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
PFDN5-207ENST00000549759 ANKRD36BQ8N2N9 1353 aa17.69■□□□□ 0.42
PFDN5-207ENST00000549759 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
PFDN5-207ENST00000549759 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
PFDN5-207ENST00000549759 TOPAZ1Q8N9V7 1692 aa17.68■□□□□ 0.42
PFDN5-207ENST00000549759 SSH2Q76I76 1423 aa17.68■□□□□ 0.42
PFDN5-207ENST00000549759 C8orf37Q96NL8 207 aa17.68■□□□□ 0.42
PFDN5-207ENST00000549759 EDC4Q6P2E9 1401 aaKnown RBP17.67■□□□□ 0.42
PFDN5-207ENST00000549759 KIF7Q2M1P5 1343 aa17.67■□□□□ 0.42
PFDN5-207ENST00000549759 SHPRHQ149N8 1683 aa17.66■□□□□ 0.42
PFDN5-207ENST00000549759 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
PFDN5-207ENST00000549759 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
PFDN5-207ENST00000549759 KCNH5Q8NCM2 988 aa17.65■□□□□ 0.42
PFDN5-207ENST00000549759 GCP02774 474 aa17.64■□□□□ 0.41
PFDN5-207ENST00000549759 PANK3Q9H999 370 aa17.64■□□□□ 0.41
PFDN5-207ENST00000549759 NME9Q86XW9 330 aa17.63■□□□□ 0.41
PFDN5-207ENST00000549759 COG3Q96JB2 828 aa17.63■□□□□ 0.41
PFDN5-207ENST00000549759 LRP6O75581 1613 aa17.62■□□□□ 0.41
PFDN5-207ENST00000549759 FNBP4Q8N3X1 1017 aaPredicted RBP17.62■□□□□ 0.41
PFDN5-207ENST00000549759 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
PFDN5-207ENST00000549759 PRDM11Q9NQV5 511 aa17.62■□□□□ 0.41
PFDN5-207ENST00000549759 USP19O94966 1318 aa17.62■□□□□ 0.41
PFDN5-207ENST00000549759 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
PFDN5-207ENST00000549759 USP21Q9UK80 565 aa17.61■□□□□ 0.41
PFDN5-207ENST00000549759 WASHC2AQ641Q2 1341 aa17.61■□□□□ 0.41
PFDN5-207ENST00000549759 USP31Q70CQ4 1352 aa17.61■□□□□ 0.41
PFDN5-207ENST00000549759 MED1Q15648 1581 aaPredicted RBP17.61■□□□□ 0.41
PFDN5-207ENST00000549759 FAM83GA6ND36 823 aa17.6■□□□□ 0.41
PFDN5-207ENST00000549759 FYB1O15117 783 aa17.6■□□□□ 0.41
PFDN5-207ENST00000549759 ZC3H6P61129 1189 aaKnown RBP17.6■□□□□ 0.41
PFDN5-207ENST00000549759 AFF2P51816 1311 aa17.6■□□□□ 0.41
PFDN5-207ENST00000549759 CGNL1Q0VF96 1302 aa17.6■□□□□ 0.41
PFDN5-207ENST00000549759 CCDC7Q96M83 1385 aa17.6■□□□□ 0.41
PFDN5-207ENST00000549759 TRPM3Q9HCF6 1732 aaPredicted RBP17.6■□□□□ 0.41
PFDN5-207ENST00000549759 KNSTRNQ9Y448 316 aa17.59■□□□□ 0.41
PFDN5-207ENST00000549759 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.4
PFDN5-207ENST00000549759 SOX12O15370 315 aa17.57■□□□□ 0.4
PFDN5-207ENST00000549759 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
PFDN5-207ENST00000549759 RGS17Q9UGC6 210 aaPredicted RBP17.57■□□□□ 0.4
PFDN5-207ENST00000549759 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
PFDN5-207ENST00000549759 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
PFDN5-207ENST00000549759 ALS2Q96Q42 1657 aa17.56■□□□□ 0.4
PFDN5-207ENST00000549759 UNC5CLQ8IV45 518 aa17.56■□□□□ 0.4
PFDN5-207ENST00000549759 QTRT2Q9H974 415 aaKnown RBP17.56■□□□□ 0.4
PFDN5-207ENST00000549759 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
PFDN5-207ENST00000549759 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
PFDN5-207ENST00000549759 CPDO75976 1380 aa17.55■□□□□ 0.4
PFDN5-207ENST00000549759 ZBTB7CA1YPR0 619 aa17.55■□□□□ 0.4
PFDN5-207ENST00000549759 EVA1CP58658 441 aa17.54■□□□□ 0.4
PFDN5-207ENST00000549759 CHRNA2Q15822 529 aa17.54■□□□□ 0.4
PFDN5-207ENST00000549759 ARHGEF25Q86VW2 580 aa17.54■□□□□ 0.4
PFDN5-207ENST00000549759 RXRBP28702 533 aa17.52■□□□□ 0.4
PFDN5-207ENST00000549759 AKAP12Q02952 1782 aa17.52■□□□□ 0.4
PFDN5-207ENST00000549759 POTEAQ6S8J7 498 aa17.51■□□□□ 0.39
PFDN5-207ENST00000549759 AATKQ6ZMQ8 1374 aa17.51■□□□□ 0.39
PFDN5-207ENST00000549759 MON2Q7Z3U7 1717 aa17.5■□□□□ 0.39
PFDN5-207ENST00000549759 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
PFDN5-207ENST00000549759 CCDC9Q9Y3X0 531 aaKnown RBP17.5■□□□□ 0.39
PFDN5-207ENST00000549759 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
PFDN5-207ENST00000549759 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
PFDN5-207ENST00000549759 SLIT3O75094 1523 aa17.49■□□□□ 0.39
PFDN5-207ENST00000549759 SLIT2O94813 1529 aa17.49■□□□□ 0.39
PFDN5-207ENST00000549759 PER1O15534 1290 aaPredicted RBP17.49■□□□□ 0.39
PFDN5-207ENST00000549759 VPS72Q15906 364 aa17.49■□□□□ 0.39
PFDN5-207ENST00000549759 STRN4Q9NRL3 753 aa17.49■□□□□ 0.39
PFDN5-207ENST00000549759 NSD2O96028 1365 aa17.49■□□□□ 0.39
PFDN5-207ENST00000549759 BCL9LQ86UU0 1499 aa17.49■□□□□ 0.39
PFDN5-207ENST00000549759 MORC1Q86VD1 984 aa17.48■□□□□ 0.39
PFDN5-207ENST00000549759 GJD4Q96KN9 370 aaPredicted RBP17.48■□□□□ 0.39
PFDN5-207ENST00000549759 NRKQ7Z2Y5 1582 aa17.48■□□□□ 0.39
PFDN5-207ENST00000549759 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
PFDN5-207ENST00000549759 AMPHP49418 695 aa17.47■□□□□ 0.39
PFDN5-207ENST00000549759 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.39
PFDN5-207ENST00000549759 IP6K1Q92551 441 aa17.45■□□□□ 0.38
PFDN5-207ENST00000549759 AXIN2Q9Y2T1 843 aa17.45■□□□□ 0.38
PFDN5-207ENST00000549759 MYOM1P52179 1685 aa17.45■□□□□ 0.38
PFDN5-207ENST00000549759 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
PFDN5-207ENST00000549759 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
PFDN5-207ENST00000549759 MAP3K19Q56UN5 1328 aa17.44■□□□□ 0.38
PFDN5-207ENST00000549759 FBLN1P23142 703 aa17.43■□□□□ 0.38
PFDN5-207ENST00000549759 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
PFDN5-207ENST00000549759 RRS1Q15050 365 aaKnown RBP17.43■□□□□ 0.38
PFDN5-207ENST00000549759 CC2D1BQ5T0F9 858 aaKnown RBP17.43■□□□□ 0.38
PFDN5-207ENST00000549759 ATRNO75882 1429 aa17.43■□□□□ 0.38
PFDN5-207ENST00000549759 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
PFDN5-207ENST00000549759 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
PFDN5-207ENST00000549759 TOM1L2Q6ZVM7 507 aa17.42■□□□□ 0.38
PFDN5-207ENST00000549759 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms